Contig 005346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008A23Sequence485005346 (3)ref|XP_010097154.1|3e-19Ribonuclease 3-like protein 1 [Morus notabilis] gb|EXB67221.1| Ribonuclease 3-li606005346 (3)ref|XP_010097154.1|1e-20Ribonuclease 3-like protein 1 [Morus notabilis] gb|EXB67221.1| Ribonuclease 3-li
JMSF050B08Sequence699000525 (2)773005346 (3)ref|XP_010097154.1|4e-20Ribonuclease 3-like protein 1 [Morus notabilis] gb|EXB67221.1| Ribonuclease 3-li

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050B08+ TCTCATGTTTTCTGGAGGTAATCC
                      ____________________________________________________________
consensus TCTCATGTTTTCTGGAGGTAATCC
 
. : . : . : . : . : . :
rJMSF050B08+ ATGTGCATATTTCNTTGTAAACTTGGGGCAAAGTAATGCGTGGGGTATTTTGATTTTAGA
                      ____________________________________________________________
consensus ATGTGCATATTTCNTTGTAAACTTGGGGCAAAGTAATGCGTGGGGTATTTTGATTTTAGA
 
. : . : . : . : . : . :
rJMSF050B08+ CCACCGGTGTCACGGTTTTGTTGAAGAAAGATACTAAAGAGATAGCTACTAGAAGAGTTT
                      ____________________________________________________________
consensus CCACCGGTGTCACGGTTTTGTTGAAGAAAGATACTAAAGAGATAGCTACTAGAAGAGTTT
 
. : . : . : . : . : . :
rJMSF050B08+ ATTAATCTTGAGGTTCCAACTCCATTGACGCACCAAAAAGAATTATGTGTACTTTCTCAC
                      ____________________________________________________________
consensus ATTAATCTTGAGGTTCCAACTCCATTGACGCACCAAAAAGAATTATGTGTACTTTCTCAC
 
. : . : . : . : . : . :
rJMSF050B08+ TTTTACTCATAATGTGACATATTTTAATTATGTGAGTCTCAGAACAAATGTTAATATCAA
                      ____________________________________________________________
consensus TTTTACTCATAATGTGACATATTTTAATTATGTGAGTCTCAGAACAAATGTTAATATCAA
 
. : . : . : . : . : . :
rJMSF050B08+ GAATTTATGAGAGGAAGTATAATATTAGGAGTAAAAAGTGAAAGTTAGTATGTTTGGAAT
                      ____________________________________________________________
consensus GAATTTATGAGAGGAAGTATAATATTAGGAGTAAAAAGTGAAAGTTAGTATGTTTGGAAT
 
. : . : . : . : . : . :
rJMSF050B08+ AAAAGAAGATAAAAAAAAGGCAACCATTTCCATTCTTCTAAAAGGCTGAACCCCAACCAA
                      ____________________________________________________________
consensus AAAAGAAGATAAAAAAAAGGCAACCATTTCCATTCTTCTAAAAGGCTGAACCCCAACCAA
 
. : . : . : . : . : . :
JMFF008A23- CAGGTGCGTTGAAAGGGATGGCAAGAT
rJMSF050B08+ GACAACCATTTCCATGTTTTGATGACTGATCATCAGGTGCGTTGAAAGGGATGGCAAGAT
rJMFF008A23+ CAGGTGCGTTGAAAGGGATGGCAAGAT
                      ____________________________________________________________
consensus GACAACCATTTCCATGTTTTGATGACTGATCATCAGGTGCGTTGAAAGGGATGGCAAGAT
 
. : . : . : . : . : . :
JMFF008A23- CAGAGTTGTATGAGATCTGTGCAGCCAGTCGCTGGAACCCACCAGTCTTTGACTGTTGCA
rJMSF050B08+ CAGAGTTGTATGAGATCTGTGCAGCCAGTCGCTGGAACCCACCAGTCTTTGACTGTTGCA
rJMFF008A23+ CAGAGTTGTATGAGATCTGTGCAGCCAGTCGCTGGAACCCACCAGTCTTTGACTGTTGCA
                      ____________________________________________________________
consensus CAGAGTTGTATGAGATCTGTGCAGCCAGTCGCTGGAACCCACCAGTCTTTGACTGTTGCA
 
. : . : . : . : . : . :
JMFF008A23- GTGAGGAAGGTCCAAGTCACCAGAAAACGTTCAAGTTCANGGTANGGGTAGAGATAAAAG
rJMSF050B08+ GTGAGGAAGGTCCAAGTCACCAGAAAACGTTCAAGTTCAAGGTAAGGGTAGAGATAAAAG
rJMFF008A23+ GTGAGGAAGGTCCAAGTCACCAGAAAACGTTCAAGTTCAAGGTAAGGGTAGAGATAAAAG
                      ____________________________________________________________
consensus GTGAGGAAGGTCCAAGTCACCAGAAAACGTTCAAGTTCAAGGTAAGGGTAGAGATAAAAG
 
. : . : . : . : . : . :
JMFF008A23- GAGAACATAAAGCGACCACTTTGGTGTGTTTTAGCAACCCGTTTCCGATGAAGAAAGCGG
rJMSF050B08+ GAGAACATAAAGCGACCACTTTGGTGTGTTTTAGCAACCCGTTTCCGATGAAGAAAGCGG
rJMFF008A23+ GAGAACATAAAGCGACCACTTTGGTGTGTTTTAGCAACCCGTTTCCGATGAAGAAAGCGG
                      ____________________________________________________________
consensus GAGAACATAAAGCGACCACTTTGGTGTGTTTTAGCAACCCGTTTCCGATGAAGAAAGCGG
 
. : . : . : . : . : . :
JMFF008A23- CGGCAGAGAATGCANCTGAAGGGGCACTCTGGTTCTTGAACCATCTTGGTTATCGCTCA
rJMSF050B08+ CGGCAGAGAATGCAGCTGAAGGGGCACTCTGGTTCTTGAACCATCTTGGTTATCGCTCAA
rJMFF008A23+ CGGCAGAGAATGCAGCTGAAGGGGCACTCTGGTTCTTGAACCATCTTGGTTATCGCTCAA
                      ____________________________________________________________
consensus CGGCAGAGAATGCAGCTGAAGGGGCACTCTGGTTCTTGAACCATCTTGGTTATCGCTCAA
 
. : . : . : . : . : . :
rJMSF050B08+ AGAATCAATGAAAAAAAGAAAAAAACATTCTGGATTTTCTGTCAGTCTGGAGTGCCA
rJMFF008A23+ AGAATCAATGAAAAAAAGAAAAAAACATTCTGGATTTTCTGTCAGTCTGGAGTGCCAATT
                      ____________________________________________________________
consensus AGAATCAATGAAAAAAAGAAAAAAACATTCTGGATTTTCTGTCAGTCTGGAGTGCCAATT
 
. : . : . : . : . : . :
rJMFF008A23+ ACAATAAAATTGTAAGTGTAAAATATTTTATTATTATTTTTTTAATTAGAGAACAAAAAA
                      ____________________________________________________________
consensus ACAATAAAATTGTAAGTGTAAAATATTTTATTATTATTTTTTTAATTAGAGAACAAAAAA