Contig 005341:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF006F04+                               CTATGGGTGATGCAGCAGTTGCAGCAGCTGCATCTATAG
                      ____________________________________________________________
consensus                                  CTATGGGTGATGCAGCAGTTGCAGCAGCTGCATCTATAG
 
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rJMFF014P02+                                              ATGAAAGAGGATCTTTTTACTTTA
rJMFF006F04+          GTTACATAGGTGTTGGTACTATTGAGTTCCTTCTGGATGAAAGAGGATCTTTTTACTTTA
                      ____________________________________________________________
consensus             GTTACATAGGTGTTGGTACTATTGAGTTCCTTCTGGATGAAAGAGGATCTTTTTACTTTA
 
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rJMFF014P02+          TGGAGATGAATACTAGAATTCCAGGTAGAGCATCCGGTTACAGAAATGATTTCCTCTGTT
rJMFF006F04+          TGGAGATGAATACTAGAATT-CAGGTAGAGCATCCGGTTACAGAAATGATTTCCTCTGTT
                      ____________________________________________________________
consensus             TGGAGATGAATACTAGAATTCCAGGTAGAGCATCCGGTTACAGAAATGATTTCCTCTGTT
 
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rJMFF014P02+          GACCTAATAGAAGAACAGATCCGTGTTGCTATGGGAGAAAAACTTCGCTACAACCAGGAG
rJMFF006F04+          GACCTAATAGAAGAACAGATCCGTGTTGCTATGGGAGAAAAACTTCGCTACAACCAGGAG
                      ____________________________________________________________
consensus             GACCTAATAGAAGAACAGATCCGTGTTGCTATGGGAGAAAAACTTCGCTACAACCAGGAG
 
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rJMFF014P02+          GATATTGTGCTAAGAGGTCATTCAATTGAATGCCGGATTAATGCAGAAGATGCTTTCAAA
rJMFF006F04+          GATATTGTGCTAAGAGGTCATTCAATTGAATGCCGGATTAATGCAGAAGATGCTTTCAAA
                      ____________________________________________________________
consensus             GATATTGTGCTAAGAGGTCATTCAATTGAATGCCGGATTAATGCAGAAGATGCTTTCAAA
 
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rJMFF014P02+          AATTTCAGACCTGGGCCAGGGAGAATAACTGCATATTTGCCAGCTGGAGGTCCATTTGTG
rJMFF006F04+          AATTTCAGACCTGGGCCAGGGAGAATAACTGCATATTTGCCAGCTGGAGGTCCATTTGTG
                      ____________________________________________________________
consensus             AATTTCAGACCTGGGCCAGGGAGAATAACTGCATATTTGCCAGCTGGAGGTCCATTTGTG
 
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rJMFF014P02+          CGCATGGATAGCCATGTTTATCCTGATTATGTGGTTCCGCCAAGTTATGATTCCCTACTT
rJMFF006F04+          CGCATGGATAGCCATGTTTATCCTGATTATGTGGTTCCGCCAAGTTATGATTCCCTACTT
                      ____________________________________________________________
consensus             CGCATGGATAGCCATGTTTATCCTGATTATGTGGTTCCGCCAAGTTATGATTCCCTACTT
 
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rJMFF014P02+          GGAAAGCTTATTGTATGGGCCCCAACCCGTGAGAGGGCTATTGCACGCATGAAAAGAGCA
rJMFF006F04+          GGAAAGCTTATTGTATGGGCCCCAACCCGTGAGAGGGCTATTGCACGCATGAAAAGAGCA
                      ____________________________________________________________
consensus             GGAAAGCTTATTGTATGGGCCCCAACCCGTGAGAGGGCTATTGCACGCATGAAAAGAGCA
 
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rJMFF014P02+          CTTGATGACACTATTATTACAGGTGTTCCAACTACAATTGATTATCATAAACTTATCCTT
rJMFF006F04+          CTTGATGACACTATTATTACAGGTGTTCCAACTACAATTGATTATCATAAACTTATCCTT
                      ____________________________________________________________
consensus             CTTGATGACACTATTATTACAGGTGTTCCAACTACAATTGATTATCATAAACTTATCCTT
 
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rJMFF014P02+          GACATTGAGGATTTCAGAAATGGGAAAGTTGATACAGCCTTTATTCCAAAGCATGAAGAT
rJMFF006F04+          GACATTGAGGATTTCAGAAATGGGAAAGTTGATACAGCCTTTATTCCAAAGCATGAAGAT
                      ____________________________________________________________
consensus             GACATTGAGGATTTCAGAAATGGGAAAGTTGATACAGCCTTTATTCCAAAGCATGAAGAT
 
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rJMFF014P02+          GAATTAGCTGCTCCTACAGTTACAGAGAAAGAGTTGGTGAAGGCTAGTGCTTAAAACTTT
rJMFF006F04+          GAATTAGCTGCTCCTACAGTTACAGAGAAAGAGTTGGTGAAGGCTAGTGCTTAAAACTTT
                      ____________________________________________________________
consensus             GAATTAGCTGCTCCTACAGTTACAGAGAAAGAGTTGGTGAAGGCTAGTGCTTAAAACTTT
 
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rJMFF014P02+          CTTCCAGTTGGAGTGGATTATTTTCCAATCGGTCTGAACTTCAGAGTTTTATTTTGAGTT
rJMFF006F04+          CTTCCAGTTGGAGTGGATTATTTTCCAATCGGTCTGAACTTCAGAGTTTTATTTTGAGTT
                      ____________________________________________________________
consensus             CTTCCAGTTGGAGTGGATTATTTTCCAATCGGTCTGAACTTCAGAGTTTTATTTTGAGTT
 
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rJMFF014P02+          TAATCTTCTAGCCATTTAGCATCGATGAATAGACTTGACTTGAGATTCAAATAGAAATGT
rJMFF006F04+          TAATCTTCTAGCCATTTAGCATCGATGAATAGACTTGACTTGAGATTCAAATAGAAATGT
                      ____________________________________________________________
consensus             TAATCTTCTAGCCATTTAGCATCGATGAATAGACTTGACTTGAGATTCAAATAGAAATGT
 
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rJMFF014P02+          ATTATTTTTCCTTGATTTGTCATGTGGTGAATCACTTCTGTATTTGTAAACAATAAAACT
rJMFF006F04+          ATTATTTTTCCTTGATTTGTCATGTGGTGAATCACTTCTGTATTTGTAAACAATAAAACT
                      ____________________________________________________________
consensus             ATTATTTTTCCTTGATTTGTCATGTGGTGAATCACTTCTGTATTTGTAAACAATAAAACT