Contig 005334:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032B17+                                                              TCGGAATT
                      ____________________________________________________________
consensus                                                                 TCGGAATT
 
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rJMSF032B17+          ATTTGGCGGGTATGCTGGAGCCCTGCGTACGCAGAGTTATATACTTGGATTCTGATCTGG
                      ____________________________________________________________
consensus             ATTTGGCGGGTATGCTGGAGCCCTGCGTACGCAGAGTTATATACTTGGATTCTGATCTGG
 
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rJMSF032B17+          TTGTGGTGGACGATATTTCCAAGCTATGGACTACAAACTTGGGGGACAAGACCATCGGAG
rJMFF004J10+                            CCAAGCTATGGACTACAAACTTGGGGGACAAGACCATCGGAG
                      ____________________________________________________________
consensus             TTGTGGTGGACGATATTTCCAAGCTATGGACTACAAACTTGGGGGACAAGACCATCGGAG
 
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rJMSF032B17+          CTCCGGAGTACTGTCACGCCAACTTCACCAAGTACTTCACCTCTAATTTCTGGTCGGACC
rJMFF004J10+          CTCCGGAGTACTGTCACGCCAACTTCACCAAGTACTTCACCTCTAATTTCTGGTCGGACC
                      ____________________________________________________________
consensus             CTCCGGAGTACTGTCACGCCAACTTCACCAAGTACTTCACCTCTAATTTCTGGTCGGACC
 
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rJMSF032B17+          GGAGTTTATACGCTACGTTCGCCGGCCGGAAACCGTGCTACTTCAACACAGGCGTTATGG
rJMFF004J10+          GGAGTTTATACGCCACGTTCGCCGGCCGGAAACCGTGCTACTTCAACACCGGCGTTATGG
                      ____________________________________________________________
consensus             GGAGTTTATACGCTACGTTCGCCGGCCGGAAACCGTGCTACTTCAACACCGGCGTTATGG
 
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rJMSF032B17+          TCATAGATCTAGCGAAATGGAGGCGGTTGGGGTACACCAAGCGTATTGAGAGGTGGATGG
rJMFF004J10+          TCATAGATCTAGCGAAATGGAGGCGGTTGGGGTACACCAAGCGTATTGAGAGGTGGATGG
                      ____________________________________________________________
consensus             TCATAGATCTAGCGAAATGGAGGCGGTTGGGGTACACCAAGCGTATTGAGAGGTGGATGG
 
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rJMSF032B17+          AGATCCAGAAGACGAACCGGATCTACGAATTGGGGTCACTGCCGCCATTCCTGCTAGTGT
rJMFF004J10+          AGATCCAGAAGACGAACCGGATCTACGAATTGGGGTCACTGCCGCCATTCCTGCTAGTGT
                      ____________________________________________________________
consensus             AGATCCAGAAGACGAACCGGATCTACGAATTGGGGTCACTGCCGCCATTCCTGCTAGTGT
 
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rJMSF032B17+          TTGCGGGAGAAGTGGCGCCCATTGAGCACAGGTGGAACCAGCACGGTTTGGGCGGCGATA
rJMFF004J10+          TTGCGGGAGAAGTGGCGCCCATTGAGCACAGGTGGAACCAGCACGGTTTGGGCGGCGATA
                      ____________________________________________________________
consensus             TTGCGGGAGAAGTGGCGCCCATTGAGCACAGGTGGAACCAGCACGGTTTGGGCGGCGATA
 
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rJMSF032B17+          ATGTACGAGGAAGCTGCCGGAACCTCCACCCTGGTCCGGTGAGTCTCCTCCACTGGAGCG
rJMFF004J10+          ATGTACGAGGAAGCTGCCGGAACCTCCACCCTGGTCCGGTGAGTCTCCTCCACTGGAGCG
                      ____________________________________________________________
consensus             ATGTACGAGGAAGCTGCCGGAACCTCCACCCTGGTCCGGTGAGTCTCCTCCACTGGAGCG
 
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rJMSF032B17+          GCAGCGGCAAGCCGTGGCTGAGGCTGGACTCCAGGAAGCCATGCCCGCTTGACTCTCTAT
rJMFF004J10+          GCAGCGGCAAGCCGTGGCTGAGGCTGGACTCCAGGAAGCCATGCCCGCTTGACTCTCTAT
                      ____________________________________________________________
consensus             GCAGCGGCAAGCCGTGGCTGAGGCTGGACTCCAGGAAGCCATGCCCGCTTGACTCTCTAT
 
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rJMSF032B17+          GGGCACCGTACGACCTCCATGGACATTCAACGTGAACTCAACTCCTCTACTGTTATCTCG
rJMFF004J10+          GGGCACCGTACGACCTCCATGGACATTCAACGTGAACTCAACTCCTCTACTGTTATCTCG
                      ____________________________________________________________
consensus             GGGCACCGTACGACCTCCATGGACATTCAACGTGAACTCAACTCCTCTACTGTTATCTCG
 
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rJMSF032B17+          CCGGTAAATTCCTAGTCAGTCTAAATTTCTTTTGTTTCCCGTCTCTTTGAATTTTCTGGT
rJMFF004J10+          CCGGTAAATTCCTAGTCAGTCTAAATTTCTTTTGTTTCCCGTCTCTTTGAATTTTCTGGT
                      ____________________________________________________________
consensus             CCGGTAAATTCCTAGTCAGTCTAAATTTCTTTTGTTTCCCGTCTCTTTGAATTTTCTGGT
 
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rJMSF032B17+          CGACATCT                                                    
rJMFF004J10+          CGACATCTTCATTTCTCCATTAATTTTTGTCAGTCTTTTCTTATATTCAGAATTTTTTTC
                      ____________________________________________________________
consensus             CGACATCTTCATTTCTCCATTAATTTTTGTCAGTCTTTTCTTATATTCAGAATTTTTTTC
 
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rJMFF004J10+          TCTTGATTTTTTTTGGCATTTGGATTAAAATATAGCTCCATTATTATATGATGATGAGAG
                      ____________________________________________________________
consensus             TCTTGATTTTTTTTGGCATTTGGATTAAAATATAGCTCCATTATTATATGATGATGAGAG
 
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rJMFF004J10+          AGGATTTGTATTCTATTCATCCGCACTCTGCTCTCTGAATTCGAAAAAAAGGGGAAAATC
                      ____________________________________________________________
consensus             AGGATTTGTATTCTATTCATCCGCACTCTGCTCTCTGAATTCGAAAAAAAGGGGAAAATC