Contig 005333:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003P15Sequence523005923 (2)ref|XP_010273388.1|2e-56PREDICTED: protein SRG1-like [Nelumbo nucifera]690005333 (2)ref|XP_004233006.1|1e-84PREDICTED: protein SRG1-like [Solanum lycopersicum]
JMFF012C05Sequence480005923 (2)ref|XP_010273388.1|4e-39PREDICTED: protein SRG1-like [Nelumbo nucifera]780005333 (2)ref|XP_004233006.1|3e-93PREDICTED: protein SRG1-like [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF012C05+          CCTTTTTCCTATACTACCAGAGGTTTTCAGGGATACTGTGGAAGCATACTCATTAGAAGT
                      ____________________________________________________________
consensus             CCTTTTTCCTATACTACCAGAGGTTTTCAGGGATACTGTGGAAGCATACTCATTAGAAGT
 
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rJMFF012C05+          GCATAAGCTTGCCATGAAGGTTTTAAGTCTTGTAGCACAAAATTTGGGAATAGAACTCGA
rJMFF003P15+                                        TGTAGCACAAAATTTGGGAATAGAACTCGA
                      ____________________________________________________________
consensus             GCATAAGCTTGCCATGAAGGTTTTAAGTCTTGTAGCACAAAATTTGGGAATAGAACTCGA
 
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rJMFF012C05+          AGAAATGAGAATGGTTTTCGAAGAAGGAATGCAGTCAATTAGGATGAACTATTATCCACC
rJMFF003P15+          AGAAATGAGAATGGTTTTCGAAGAAGGAATGCAGTCAATTAGGATGAACTATTATCCACC
                      ____________________________________________________________
consensus             AGAAATGAGAATGGTTTTCGAAGAAGGAATGCAGTCAATTAGGATGAACTATTATCCACC
 
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rJMFF012C05+          ATGTCCTCAACCAGAGCTTGTTATGGGTCTTAGCCCACACTCTGATCCAGGTGGCTTAAC
rJMFF003P15+          ATGTCCTCAACCAGAGCTTGTTATGGGTCTTAGCCCACACTCTGATCCAGGTGGCTTAAC
                      ____________________________________________________________
consensus             ATGTCCTCAACCAGAGCTTGTTATGGGTCTTAGCCCACACTCTGATCCAGGTGGCTTAAC
 
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rJMFF012C05+          TATACTCCTTCAAGTGAATGAAACAAATGGTCTTGAGATTAAAAAGGATGGAGTTTGGAT
rJMFF003P15+          TATACTCCTTCAAGTGAATGAAACAAATGGTCTTGAGATTAAAAAGGATGGAGTTTGGAT
                      ____________________________________________________________
consensus             TATACTCCTTCAAGTGAATGAAACAAATGGTCTTGAGATTAAAAAGGATGGAGTTTGGAT
 
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rJMFF012C05+          TCCCATTGTGCCACTTCCAAATGCCTTCATTGTTAATGTTGGGGATTCTCTAGAGATATT
rJMFF003P15+          TCCCATTGTGCCACTTCCAAATGCCTTCATTGTTAATGTTGGGGATTCTCTAGAGATATT
                      ____________________________________________________________
consensus             TCCCATTGTGCCACTTCCAAATGCCTTCATTGTTAATGTTGGGGATTCTCTAGAGATATT
 
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rJMFF012C05+          TACAAATGGAGCTTATCGCAGCATTGAACATAGAGGAATAGTAAGTAGAGACAAGGAGAG
rJMFF003P15+          TACAAATGGAGCTTATCGCAGCATTGAACATAGAGGAATAGTAAGTAGAGACAAGGAGAG
                      ____________________________________________________________
consensus             TACAAATGGAGCTTATCGCAGCATTGAACATAGAGGAATAGTAAGTAGAGACAAGGAGAG
 
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rJMFF012C05+          GATATCTATTGCAACATTTCTGAGCCCAAGGTTGGATGGTGAGTTAGGTCCAGCTATCAG
rJMFF003P15+          GATATCTATTGCAACATTTCTGAGCCCAAGGTTGGATGGTGAGTTAGGTCCAGCTATCAG
                      ____________________________________________________________
consensus             GATATCTATTGCAACATTTCTGAGCCCAAGGTTGGATGGTGAGTTAGGTCCAGCTATCAG
 
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rJMFF012C05+          CCTTATCACCCCACAAAACCCACCAAAATTCAAGAGAGTTACTGTGACTGAGTTTTTTCG
rJMFF003P15+          CCTTATCACCCCACAAAACCCACCAAAATTCAAGAGAGTTACTGTGACTGAGTTTTTTCG
                      ____________________________________________________________
consensus             CCTTATCACCCCACAAAACCCACCAAAATTCAAGAGAGTTACTGTGACTGAGTTTTTTCG
 
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rJMFF012C05+          TTTGTTTTTTGGACGAAAGCTTGATGGGAAATCACAAGTGGATGCCTTTAGATTGGTCAA
rJMFF003P15+          TTTGTTTTTTGGACGAAAGCTTGATGGGAAATCACAAGTGGATGCCTTTAGATTGGTCAA
                      ____________________________________________________________
consensus             TTTGTTTTTTGGACGAAAGCTTGATGGGAAATCACAAGTGGATGCCTTTAGATTGGTCAA
 
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rJMFF012C05+          TTAATGACTATGATGAGAAGTACAATTAATAATGTTATTACTTTTTACTTTAATTTGTCT
rJMFF003P15+          TTAATGACTATGATGAGAAGTACAATTAATAATGTTATTACTTTTTACTTTAATTTGTCT
                      ____________________________________________________________
consensus             TTAATGACTATGATGAGAAGTACAATTAATAATGTTATTACTTTTTACTTTAATTTGTCT
 
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rJMFF012C05+          TTTTCATGGAAACATGGACTACATGTGGAAACATATATAAGGATAAAAACATTGTTTTCA
rJMFF003P15+          TTTTCATGGAAACATGGACTACATGTGGAAACATATATAAGGATAAAAACATTGTTTTCA
                      ____________________________________________________________
consensus             TTTTCATGGAAACATGGACTACATGTGGAAACATATATAAGGATAAAAACATTGTTTTCA
 
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rJMFF012C05+          TGCATGTAGTCCAAGACTCTGCAATAATTGTGGCGGATTGGCAACCAAAACCTTAAATAA
rJMFF003P15+          TGCATGTAGTCCAAGACTCTGCAATAATTGTGGCGGATTGGCAACCAAAACCTTAAATAA
                      ____________________________________________________________
consensus             TGCATGTAGTCCAAGACTCTGCAATAATTGTGGCGGATTGGCAACCAAAACCTTAAATAA