Contig 005331:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003B05Sequence340007280 (3)746005331 (4)ref|XP_004236202.1|177PREDICTED: F-box/kelch-repeat protein At1g74510 [Solanum lycopersicum]
JMFF006E08Sequence108007280 (3)820005331 (4)ref|XP_009616653.1|1e-111PREDICTED: F-box/kelch-repeat protein At1g74510-like [Nicotiana tomentosiformis
JMFF024K18Sequence498007280 (3)ref|XP_009616653.1|7e-45PREDICTED: F-box/kelch-repeat protein At1g74510-like [Nicotiana tomentosiformis790005331 (4)ref|XP_006344393.1|2e-102PREDICTED: F-box/kelch-repeat protein At1g74510-like isoform X3 [Solanum tubero
JMFN034M21Sequence608005331 (4)ref|XP_006344393.1|2e-93PREDICTED: F-box/kelch-repeat protein At1g74510-like isoform X3 [Solanum tubero

Alignment

This contig is upended


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rJMFF006E08+                   GGACGCATACGCCTAGATGCCTGTTTAGCACTGCGAGCCTTGGTGAAATTG
rJMFF024K18+                                                               GAAATTG
                      ____________________________________________________________
consensus                      GGACGCATACGCCTAGATGCCTGTTTAGCACTGCGAGCCTTGGTGAAATTG
 
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rJMFF006E08+          CAATCGTGGCGGGTGGTTGTGATTCAACGGGAAACATACTAAGCTCTGTAGAGCTTTATA
JMFN034M21-                                           AACATACTAAGCTCTGTAGAGCTTTATA
rJMFF024K18+          CAATCGTGGCGGGTGGTTGTGATTCAACGGGAAACATACTAAGCTCTGTAGAGCTTTATA
                      ____________________________________________________________
consensus             CAATCGTGGCGGGTGGTTGTGATTCAACGGGAAACATACTAAGCTCTGTAGAGCTTTATA
 
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rJMFF006E08+          ACTCTGAGACTGGAACTTGGGAGATTTTGCCTAGTATGAATAAAGCCAGAAAACTGTGTT
JMFN034M21-           ACTCTGAGACTGGAACTTGGGAGATTTTGCCTAGTATGAATAAAGCCAGAAAACTGTGTT
rJMFF024K18+          ACTCTGAGACTGGAACTTGGGAGATTTTGCCTAGTATGAATAAAGCCAGAAAACTGTGTT
                      ____________________________________________________________
consensus             ACTCTGAGACTGGAACTTGGGAGATTTTGCCTAGTATGAATAAAGCCAGAAAACTGTGTT
 
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rJMFF006E08+          CAGGAGTGTTCATGGATGGAAAGCTGTATGTGCTTGGAGGGGTTGGGACGGGCAGTTCGA
JMFN034M21-           CAGGAGTGTTCATGGATGGAAAGCTGTATGTGCTTGGAGGGGTTGGGACGGGCAGTTCGA
rJMFF024K18+          CAGGAGTGTTCATGGATGGAAAGCTGTATGTGCTTGGAGGGGTTGGGACGGGCAGTTCGA
                      ____________________________________________________________
consensus             CAGGAGTGTTCATGGATGGAAAGCTGTATGTGCTTGGAGGGGTTGGGACGGGCAGTTCGA
 
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rJMFF006E08+          ATATCCTCACCAGCGGGGAGGTATACGACCTGAAAGCAAGGAGTTGGGTCGAGATCCCTG
JMFN034M21-           ATATCCTCACCAGCGGGGAGGTATACGACCTGAAAACAAGGAGTTGGGTCGAGATCCCTG
rJMFF024K18+          ATATCCTCACCAGCGGGGAGGTATACGACCTGAAAACAAGGAGTTGGGTCGAGATCCCTG
rJMFF003B05+                                              CAAGGAGTTGGGTCGAGATCCCTG
                      ____________________________________________________________
consensus             ATATCCTCACCAGCGGGGAGGTATACGACCTGAAAACAAGGAGTTGGGTCGAGATCCCTG
 
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rJMFF006E08+          AAATGTT-CCCTGCACGCGGGGAAACTACCGATGCTCCTGCAACAGCCAAGGCGCCCCCT
JMFN034M21-           AAATGTT-CCCTGCACGCGGGGAAACTACCGATGCTCCTGCAACAGCCAAGGCGCCCCCT
rJMFF024K18+          AAATGTT-CCCTGCACGCGGGGAAACTACCGATGCTCCTGCAACAGCCAAGGCGCCCCCT
rJMFF003B05+          AAATGTTCCCCTGCACGCGGGGAAACTACCGATGCTCCTGCAACAGCCAAGGCGCCCCCT
                      ____________________________________________________________
consensus             AAATGTT-CCCTGCACGCGGGGAAACTACCGATGCTCCTGCAACAGCCAAGGCGCCCCCT
 
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rJMFF006E08+          CTTCTCGCGGTTGTGAAGAATCAACTGTATGCTGCTTTCTATGCTGAAAAAGAAGTGTTG
JMFN034M21-           CTTCTCGCGGTTGTGAAGAATCAACTGTATGCTGCTTTCTATGCTGAAAAAGAAGTGTTG
rJMFF024K18+          CTTCTCGCGGTTGTGAAGAATCAACTGTATGCTGCTTTCTATGCTGAAAAAGAAGTGTTG
rJMFF003B05+          CTTCTCGCGGTTGTGAAGAATCAACTGTATGCTGCTTTCTATGCTGAAAAAGAAGTGTTG
                      ____________________________________________________________
consensus             CTTCTCGCGGTTGTGAAGAATCAACTGTATGCTGCTTTCTATGCTGAAAAAGAAGTGTTG
 
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rJMFF006E08+          AAGTATAACAAGGAGAGGAACTCGTGGAGTGTAATCGGAAGGCTGCCCGAGCAGGCAACA
JMFN034M21-           AAGTATAACAAGGAGAGGAACTCGTGGAGTGTAATCGGAAGGCTGCCCGAGCAGGCAACA
rJMFF024K18+          AAGTATAACAAGGAGAGGAACTCGTGGAGTGTAATCGGAAGGCTGCCCGAGCAGGCAACA
rJMFF003B05+          AAGTATAACAAGGAGAGGAACTCGTGGAGTGTAATCGGAAGGCTGCCCGAGCAGGCAACA
                      ____________________________________________________________
consensus             AAGTATAACAAGGAGAGGAACTCGTGGAGTGTAATCGGAAGGCTGCCCGAGCAGGCAACA
 
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rJMFF006E08+          TCGGTGAATGGTTGGGGCCTGGCCTTTAAGTCTTGCGGCGATAAGATTATTACGATTGGG
JMFN034M21-           TCGGTGAATGGTTGGGGCCTGGCCTTTAAGTCTTGCGGCGATAAGATTATTACGATTGGG
rJMFF024K18+          TCGGTGAATGGTTGGGGCCTGGCCTTTAAGTCTTGCGGCGATAAGATTATTACGATTGGG
rJMFF003B05+          TCGGTGAATGGTTGGGGCCTGGCCTTTAAGTCTTGCGGCGATAAGATTATTACGATTGGG
                      ____________________________________________________________
consensus             TCGGTGAATGGTTGGGGCCTGGCCTTTAAGTCTTGCGGCGATAAGATTATTACGATTGGG
 
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rJMFF006E08+          GGTCCCCGGGCAATGAATGGAGGGTTCATAGAGATCAATTCTTGGGAGCCTGATGAAGGC
JMFN034M21-           GGTCCCCGGGCAATGAATGGAGGGTTCATAGAGATCAATTCTTGGGAGCCTGATGAAGGC
rJMFF024K18+          GGTCCCCGGGCAATGAATGGAGGGTTCATAGAGATCAATTCTTGGGAGCCTGATGAAGGC
rJMFF003B05+          GGTCCCCGGGCAATGAATGGAGGGTTCATAGAGATCAATTCTTGGGAGCCTGATGAAGGC
                      ____________________________________________________________
consensus             GGTCCCCGGGCAATGAATGGAGGGTTCATAGAGATCAATTCTTGGGAGCCTGATGAAGGC
 
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rJMFF006E08+          CAGCCCCAGTGGAACTTGCTGGGGAGAAAGCATTTGGGAAGTTTTGTCTACAATTGTGCA
JMFN034M21-           CAGCCCCAGTGGAACTTGCTGGGGAGAAAGCATTTGGGAAGTTTTGTCTACNATTGTGCA
rJMFF024K18+          CAGCCCCAGTGGAACTTGCTGGGGAGAAAGCATTTGGGAAGTTTTGTCTACAATTGTGCA
rJMFF003B05+          CAGCCCCAGTGGAACTTGCTGGGGAGAAAGCATTTGGGAAGTTTTGTCTACAATTGTGCA
                      ____________________________________________________________
consensus             CAGCCCCAGTGGAACTTGCTGGGGAGAAAGCATTTGGGAAGTTTTGTCTACAATTGTGCA
 
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rJMFF006E08+          GTGATGGGTTGCTGACATCTCTGATTTTGAAGATGCTATCCTCTCCATACTTAGCTTGTA
JMFN034M21-           GTGATGGGTTGCTGACATCTCTGATTTTGAAGATGCTATCC                   
rJMFF024K18+          GTGATGGGTTGCTGACATCTCTGATTTTGAAGATGCTATCCTCTCCATACTTAGCTTGTA
rJMFF003B05+          GTGATGGGTTGCTGACATCTCTGATTTTGAAGATGCTATCCTCTCCATACTTAGCTTGTA
                      ____________________________________________________________
consensus             GTGATGGGTTGCTGACATCTCTGATTTTGAAGATGCTATCCTCTCCATACTTAGCTTGTA
 
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rJMFF006E08+          TTTACTCTCTCTCTTGTGCCTACCATAAGAGCTTTTCAGTGATCAACTGTACAAGGATCA
rJMFF024K18+          TTTACTCTCTCTCTTGTGCCTACCATAAGAGCTTTTCAGTGATCAACTGTACAAGGATCA
rJMFF003B05+          TTTACTCTCTCTCTTGTGCCTACCATAAGAGCTTTTCAGTGATCAACTGTACAAGGATCA
                      ____________________________________________________________
consensus             TTTACTCTCTCTCTTGTGCCTACCATAAGAGCTTTTCAGTGATCAACTGTACAAGGATCA
 
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rJMFF006E08+          TAAACCAATAAGCTTTGAACATTCGTAGAAATGCAGGAGCTCATAATCAA          
rJMFF024K18+          TAAACCAATAAGCTTTGAACATTCGTAGAAATGCAGGAGCTCATAATCAATT        
rJMFF003B05+          TAAACCAATAAGCTTTGAACATTCGTAGAAATGCAGGAGCTCATAATCAATTTGTTAAAA
                      ____________________________________________________________
consensus             TAAACCAATAAGCTTTGAACATTCGTAGAAATGCAGGAGCTCATAATCAATTTGTTAAAA
 
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rJMFF003B05+          TCAAACACTTACCATTACATCTGACCTCTGCTTAACAATCTCCCAGTTACCGTGACCTAA
                      ____________________________________________________________
consensus             TCAAACACTTACCATTACATCTGACCTCTGCTTAACAATCTCCCAGTTACCGTGACCTAA
 
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rJMFF003B05+          TATTTTGTAAGCATAAGACGCAAAGCTTTCTACTTCTCGTGGCTTTGGACATTAGAATTT
                      ____________________________________________________________
consensus             TATTTTGTAAGCATAAGACGCAAAGCTTTCTACTTCTCGTGGCTTTGGACATTAGAATTT
 
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rJMFF003B05+          AGAAAGGGTCACCTAAATATAAAGTAATGGCCTTCTTGTTGATCTTAAGGAAGAACAGTA
                      ____________________________________________________________
consensus             AGAAAGGGTCACCTAAATATAAAGTAATGGCCTTCTTGTTGATCTTAAGGAAGAACAGTA