| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS070G10 | Sequence | 612 | 005324 (3) | ref|XP_009602543.1| | 4e-85 | PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Nicotiana tomentosifo | |||||
| JMSF053C07 | Sequence | 648 | 005324 (3) | ref|XP_009602543.1| | 5e-75 | PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Nicotiana tomentosifo | 911 | 005324 (3) | ref|XP_009602543.1| | 3e-111 | PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Nicotiana tomentosifo |
This contig is upended
. : . : . : . : . : . :
rJMSF053C07- AATATTTGCATTTATATGAAATGTGCCTCGTACAGGTATAGAATCGGTATAGATC
____________________________________________________________
consensus AATATTTGCATTTATATGAAATGTGCCTCGTACAGGTATAGAATCGGTATAGATC
. : . : . : . : . : . :
rJMSF053C07- CCGGATTAAAGAAAAAAGTTATATATATTGGGTATATTTACGTTAACAAGTGCTGGTGCA
____________________________________________________________
consensus CCGGATTAAAGAAAAAAGTTATATATATTGGGTATATTTACGTTAACAAGTGCTGGTGCA
. : . : . : . : . : . :
rJMSF053C07- AGAATAACTCGATTAAGGAGTACTTTGCAAGCAACAAGCCCTCAAGATATCTTCGATTGG
____________________________________________________________
consensus AGAATAACTCGATTAAGGAGTACTTTGCAAGCAACAAGCCCTCAAGATATCTTCGATTGG
. : . : . : . : . : . :
rJMSF053C07- AGGATCATCTCCTGCTTCTTTGTCCTTATGGACGTACAAGAAGTTAGTTTTACCCGGACC
____________________________________________________________
consensus AGGATCATCTCCTGCTTCTTTGTCCTTATGGACGTACAAGAAGTTAGTTTTACCCGGACC
. : . : . : . : . : . :
JMFS070G10+ CTCTTTCCCTTGTGTCTTTCTCGAACGA
rJMSF053C07- TGCAATGACTATTCCACCTTGTTGCCAACCGCCTCTTTCCCTTGTGTCTTTCTCGAACGA
____________________________________________________________
consensus TGCAATGACTATTCCACCTTGTTGCCAACCGCCTCTTTCCCTTGTGTCTTTCTCGAACGA
. : . : . : . : . : . :
JMFS070G10+ AAGCTCCCAATCCTGTCTGTAACCTTCCATGTATAATTGGATGATTTTCAGACCTGCNCC
rJMSF053C07- AAGCTCCCAATCCTGTCTGTAACCTTCCATGTATAATTGGATGATTTTCAGACCTGCCCC
JMSF053C07+ CCTGTCTGTAACCTTCCATGTATAATTGGATGATTTTCAGACCTGCCCC
____________________________________________________________
consensus AAGCTCCCAATCCTGTCTGTAACCTTCCATGTATAATTGGATGATTTTCAGACCTGCCCC
. : . : . : . : . : . :
JMFS070G10+ GGGAGTGAATGTGGTTAAAACGCCAGACACAAATCTCAATGCCTTATATGATGCGTAGCT
rJMSF053C07- GGGAGTGAATGTGGTTAAAACGCCAGACACAAATCTCAATGCCTTATATGATGCGTAGCT
JMSF053C07+ GGGAGTGAATGTGGTTAAAACGCCAGACACAAATCTCAATGCCTTATATGATGCGTAGCT
____________________________________________________________
consensus GGGAGTGAATGTGGTTAAAACGCCAGACACAAATCTCAATGCCTTATATGATGCGTAGCT
. : . : . : . : . : . :
JMFS070G10+ AGGGTCTGCATAAACCTCTCCTTTGAATTTCGTTTGTGCATAAAATGTCTTGGCCTGATC
rJMSF053C07- AGGGTCTGCATAAACCTCTCCTTTGAATTTCGTTTGTGCATAAAATGTCTTGGCCTGATC
JMSF053C07+ AGGGTCTGCATAAACCTCTCCTTTGAATTTCGTTTGTGCATAAAATGTCTTGGCCTGATC
____________________________________________________________
consensus AGGGTCTGCATAAACCTCTCCTTTGAATTTCGTTTGTGCATAAAATGTCTTGGCCTGATC
. : . : . : . : . : . :
JMFS070G10+ GACACTACCAGGCCCGATCAAGACAAGTGCCACACCAGCTGCATCCATCTTATCCTTAAC
rJMSF053C07- GACACTACCAGGCCCGATCAAGACAAGTGCCACACCAGCTGCATCCATCTTATCCTTAAC
JMSF053C07+ GACACTACCAGGCCCGATCAAGACAAGTGCCACACCAGCTGCATCCATCTTATCCTTAAC
____________________________________________________________
consensus GACACTACCAGGCCCGATCAAGACAAGTGCCACACCAGCTGCATCCATCTTATCCTTAAC
. : . : . : . : . : . :
JMFS070G10+ TGAAGCAAGATAGTCGGCCCTTTTGCGACAAAGCACGCATCCGAAATGGCGGGCAAATGC
rJMSF053C07- TGAAGCAAGATAGTCGGCCCTTTTGCGACAAAGCACGCATCCGAAATGGCGGGCAAATGC
JMSF053C07+ TGAAGCAAGATAGTCGGCCCTTTTGCGACAAAGCACGCATCCGAAATGGCGGGCAAATGC
____________________________________________________________
consensus TGAAGCAAGATAGTCGGCCCTTTTGCGACAAAGCACGCATCCGAAATGGCGGGCAAATGC
. : . : . : . : . : . :
JMFS070G10+ AACAACAGCTCTTCTATCTTTCCACAAATCAGAAATAGGTATTCCTTGTCCATTCAAACC
rJMSF053C07- AACAACAGCTCTTCTATCTTTCCACAAATCAGAAATAGGTATTCCTTGTCCATTCAAACC
JMSF053C07+ AACAACAGCTCTTCTATCTTTCCACAAATCAGAAATAGGTATTCCTTGTCCATTCAAACC
____________________________________________________________
consensus AACAACAGCTCTTCTATCTTTCCACAAATCAGAAATAGGTATTCCTTGTCCATTCAAACC
. : . : . : . : . : . :
JMFS070G10+ AAACACGTTCACATTGTCCAACACATTGACAATCTCCTCATTCACAACATTAGACTCAGT
rJMSF053C07- AAACACGTTCACATTGTCCAACACATTGACAATCTCCTCATTCACAACATTAGACTCAGT
JMSF053C07+ AAACACGTTCACATTGTCCAACACATTGACAATCTCCTCATTCACAACATTAGACTCAGT
____________________________________________________________
consensus AAACACGTTCACATTGTCCAACACATTGACAATCTCCTCATTCACAACATTAGACTCAGT
. : . : . : . : . : . :
JMFS070G10+ TCCTGCAGAGCTGGAGATAGCACAGATTCTATAGGGTTTTGTTGGAGTTGAGGCTTTAGT
rJMSF053C07- TCCTGCAGAGCTGGAGATAGCACAGATTCTATAGGGTTTTGTTGGAGTTGAGGCTTTAGT
JMSF053C07+ TCCTGCAGAGCTGGAGATAGCACAGATTCTATAGGGTTTTGTTGGAGTTGAGGCTTTAGT
____________________________________________________________
consensus TCCTGCAGAGCTGGAGATAGCACAGATTCTATAGGGTTTTGTTGGAGTTGAGGCTTTAGT
. : . : . : . : . : . :
JMFS070G10+ AGTGATGGGTTTTGGCCTGAGGTTGAGAGGAAAGCTGAGATTTTGATGAAGTGGGTTTTG
rJMSF053C07- AGTGATGGGTTTTGGCCTGAGGTTGAGAGGAAAGCTGAGATTTTGATGAAGTGGGTTTTG
JMSF053C07+ AGTGATGGGTTTTGGCCTGAGGTTGAGAGGAAAGCTGAGATTTTGATGAAGTGGGTTTTG
____________________________________________________________
consensus AGTGATGGGTTTTGGCCTGAGGTTGAGAGGAAAGCTGAGATTTTGATGAAGTGGGTTTTG
. : . : . : . : . : . :
JMFS070G10+ ATAAATGTTGCCGCC-AAAAAGCAGCATGCTACCGCCATAGCTTC
rJMSF053C07- ATAAATGTTGCCGCCAAAAAAGCAGCATGCTACCGCCATAGCTTCGCGTTGTTGTTGCAA
JMSF053C07+ ATAAATGTTGCCGCC-AAAAAGCAGCATGCTACCGCCATAGCTTCGCGTTGTTGTTGCAG
____________________________________________________________
consensus ATAAATGTTGCCGCC-AAAAAGCAGCATGCTACCGCCATAGCTTCGCGTTGTTGTTGCAG
. : . : . : . : . : . :
rJMSF053C07- AGAGAGATGCTGCCAT
JMSF053C07+ AGAGAGATGCTGCCATGGCTGTAGTGTCGAGATGGCAGTTCCCGGGAGAAATCAAGAAGC
____________________________________________________________
consensus AGAGAGATGCTGCCATGGCTGTAGTGTCGAGATGGCAGTTCCCGGGAGAAATCAAGAAGC