Contig 005322:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023G09+                                                       CTCTGGCCAATTGGTA
                      ____________________________________________________________
consensus                                                         CTCTGGCCAATTGGTA
 
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JMSF023G09+           CGTACACCGGTCTCATCAGGTCTGTATCAACTGGTTCAGCCGGATGGCTGACCCCATGGA
                      ____________________________________________________________
consensus             CGTACACCGGTCTCATCAGGTCTGTATCAACTGGTTCAGCCGGATGGCTGACCCCATGGA
 
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JMSF023G09+           ACGATGAAGAATTGATATCTTCATACGAATCAGCACTTGTCTTAAACGATGAACCAACAT
                      ____________________________________________________________
consensus             ACGATGAAGAATTGATATCTTCATACGAATCAGCACTTGTCTTAAACGATGAACCAACAT
 
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JMSF023G09+           CAAGCATAACATCCTCTTCTGTCTCATGACAAATCATCCCTCCTCCTTTCCATGCTTGTA
                      ____________________________________________________________
consensus             CAAGCATAACATCCTCTTCTGTCTCATGACAAATCATCCCTCCTCCTTTCCATGCTTGTA
 
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JMSF023G09+           GAGGAGGCCCAGTTAAGACGAGATCTTCAAACTCCTGCAAATTGGGTTTGTTCCCCACAT
JMSF052P06+                                                                CCCACAT
                      ____________________________________________________________
consensus             GAGGAGGCCCAGTTAAGACGAGATCTTCAAACTCCTGCAAATTGGGTTTGTTCCCCACAT
 
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JMSF023G09+           CTCGCCTTTCGAAAACTGGGCGAGTACTCATCAATTTAGCCTCAGGCCTTTCGAAAACTT
JMFS052G07+                                                            TTCGAAAACTT
JMSF052P06+           CTCNCNTTTCGAAAACTGGGCGAGTACTCATCAATTTAGCCTCA-GCCNTTCGAAAACTT
                      ____________________________________________________________
consensus             CTCGCCTTTCGAAAACTGGGCGAGTACTCATCAATTTAGCCTCAGGCCTTTCGAAAACTT
 
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JMSF023G09+           GGTGAGTACTCATCAATTTAGTAGCCTCAGGCCTTTCAAAAACTGGGCGAGTACTCATCA
JMFS052G07+           GGTGAGTACTCATCAATTTAGTAGCTTCAGGCCTTTCAAAAACTGGGCGAGTACTCATCA
JMFS010G07+              GAGTACTCATCAATTTAGTAGCCTCAGGCCTTTCAAAAACTGGGCGAGTACTCATCA
JMSF052P06+           GGTGAGTACTCATCAATTTAGTAGCCTCAGGCCTTTCAAAAACTGGGCGAGTACTCATCA
                      ____________________________________________________________
consensus             GGTGAGTACTCATCAATTTAGTAGCCTCAGGCCTTTCAAAAACTGGGCGAGTACTCATCA
 
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JMSF023G09+           ATCTAGCCTCGGGTTTGTTTCCCACATCTCGTCTTTCAAAAACTGGGTGAGTACTCATCA
JMFS052G07+           ATCTAGCCTCGGGTTTGTTTCCCACATCTCGTCTTTCAAAAACTGGGTGAGTACTCATCA
JMFS010G07+           ATCTAGCATCGGGTTTGTTTCCCACATCTCGTCTTTCAAAAACTGGGTGAGTACTCATCA
JMSF052P06+           ATCTAGCCTCGGGTTTGTTTCCCACATCTCGTCTTTCAAAAACTGGGTGAGTACTCATCA
                      ____________________________________________________________
consensus             ATCTAGCCTCGGGTTTGTTTCCCACATCTCGTCTTTCAAAAACTGGGTGAGTACTCATCA
 
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JMSF023G09+           ATTTACCCTCACTAGACAACGGTGAGGGCAGAGGCGCCACCTTAGCCTCTAAAGGCTGCC
JMFS052G07+           ATTTACCCTCACTAGACAACGGTGAGGGCAGAGGCGCCACCTTAGCCTCTAAAGGCTGCC
JMFS010G07+           ATTTACCCTCACTAGACAACGGTGAGGGCAGAGGCGCCACCTTAGCCTCTAAAGGCTGCC
JMSF052P06+           ATTTACCCTCACTAGACAACGGTGAGGGCAGAGGCGCCACCTTAGCCTCTAAAGGCTGCC
                      ____________________________________________________________
consensus             ATTTACCCTCACTAGACAACGGTGAGGGCAGAGGCGCCACCTTAGCCTCTAAAGGCTGCC
 
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JMSF023G09+           TTGGAACTGGTTTTGATTCTGAACCCCTTTGCATCTCTGGTTACAAAATATCATCACAAG
JMFS052G07+           TTGGAACTGGTTTTGATTCTGAACCCCTTTGCATCTCTGGTTACAAAATATCATCACAAG
JMFS010G07+           TTGGAACTGGTTTTGATTCTGAACCCCTTTGCATCTCTGGTTACAAAATATCATCACAAG
JMSF052P06+           TTGGAACTGGTTTTGATTCTGAACCCCTTTGCATCTCTGGTTACAAAATATCATCACAAG
                      ____________________________________________________________
consensus             TTGGAACTGGTTTTGATTCTGAACCCCTTTGCATCTCTGGTTACAAAATATCATCACAAG
 
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JMSF023G09+           CACACCTCTGCCTGTGTGACTGCGTCTCTACTCCAGAGCACTAGAAGCCGCGATTAATGG
JMFS052G07+           CACACCTCTGCCTGTGTGACTGCGTCTCTACTCCAGAGCACTAGAAGCCGCGATTAATGG
JMFS010G07+           CACACCTCTGCCTGTGTGACTGCGTCTCTACTCCAGAGCACTAGAAGCCGCGATTAATGG
JMSF052P06+           CACACCTCTGCCTGTGTGACTGCGTCTCTACTCCAGAGCACTAGAAGCCGCGATTAATGG
                      ____________________________________________________________
consensus             CACACCTCTGCCTGTGTGACTGCGTCTCTACTCCAGAGCACTAGAAGCCGCGATTAATGG
 
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JMSF023G09+           CGAGCAGGGAATAC                                              
JMFS052G07+           CGAGCAGGGAATACGAATTTAAGCAAACACCTCTCAGGCGCAATAAATGGGGGGTTTTCA
JMFS010G07+           CGAGCAGGGAATACGAATTTAAGCAAACACCTCTCAGGCGCAATAAATGGGGGGTTTTCA
JMSF052P06+           CGAGCAGGGAATACGAATTTAAGCAAACACCTCTCAGGCGCAATAAATGGGGGGTTTTCA
                      ____________________________________________________________
consensus             CGAGCAGGGAATACGAATTTAAGCAAACACCTCTCAGGCGCAATAAATGGGGGGTTTTCA
 
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JMFS052G07+           GTTTTCAGTTCTGGGAATTGAATGCTTTTTCGGCGAGACTACAACAGCTACGGCGCGCTT
JMFS010G07+           GTTTTCAGTTCTGGGAATTGAATGCTTTTTCGGCGAGACTACAACAGCTACGGCGCGCTT
JMSF052P06+           GTTTTCAGTTCTGGGAATTGAATGCTTTTTCGGCGAGACTACAACAGCTACGGCGCGCTT
                      ____________________________________________________________
consensus             GTTTTCAGTTCTGGGAATTGAATGCTTTTTCGGCGAGACTACAACAGCTACGGCGCGCTT
 
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JMFS052G07+           AGCAGCTGCCGAGAATGTTAATACGAGTAGAGTTCTAGGTAACAACGAGAATAGCAATAG
JMFS010G07+           AGCAGCTGCCGAGAATGTTAATACGAGTAGAGTACTAGGTAACAACGAGAATAGCAATAG
JMSF052P06+           AGCAGCTGCTGAGAATGTTAATACGAGTAGAGTACTAGGTAACAACGAGAATAGCAATAG
                      ____________________________________________________________
consensus             AGCAGCTGCCGAGAATGTTAATACGAGTAGAGTACTAGGTAACAACGAGAATAGCAATAG
 
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JMFS052G07+           CAATAGTAATAGGATTACGCTATGAGGGTATAGGGAAGGGAAGAAAAGGAGCGATCTTTC
JMFS010G07+           CAATAGTAATAGGATTACGCTATGAGGGTATAGGGAAGGGAAGAAAAGGAGCGATCTTTC
JMSF052P06+           CAATAGTAATAGGATTACGCTATGAGGGTATAGGGAAGGGAAGAAAAGGAGCGATCTTTC
                      ____________________________________________________________
consensus             CAATAGTAATAGGATTACGCTATGAGGGTATAGGGAAGGGAAGAAAAGGAGCGATCTTTC
 
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JMFS052G07+           TTTCACTGGCCTGCAATGGCTGGCAAAGTCTGCGAACTACTACTACGGCGAGTAG     
JMFS010G07+           TTTCACTGGCCTGCAATGGCTGGCAAAGTCTGCGAACTACTACTACGGCGAGTAG     
JMSF052P06+           TTTCACTGGCCTGCAATGGCTGGCAAAGTCTGCGAACTACTACTACGGCGAGTAGGCGGA
                      ____________________________________________________________
consensus             TTTCACTGGCCTGCAATGGCTGGCAAAGTCTGCGAACTACTACTACGGCGAGTAGGCGGA
 
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JMSF052P06+           GGAAGGGGCAGAGCAGCTTTTGCTTTTTCGTCGTTTTAGGCTTGCTTTAGTCATGTGCCC
                      ____________________________________________________________
consensus             GGAAGGGGCAGAGCAGCTTTTGCTTTTTCGTCGTTTTAGGCTTGCTTTAGTCATGTGCCC