Contig 005316:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006E05Sequence635005316 (5)dbj|BAD11071.1|5e-88hin1 like protein [Capsicum chinense]
JMFN014M18Sequence610005316 (5)dbj|BAD11071.1|6e-78hin1 like protein [Capsicum chinense]
JMFN039E11Sequence609005316 (5)dbj|BAD11071.1|6e-78hin1 like protein [Capsicum chinense]
JMSF051P05Sequence640005316 (5)dbj|BAD11071.1|1e-81hin1 like protein [Capsicum chinense]653005316 (5)dbj|BAD11071.1|1e-77hin1 like protein [Capsicum chinense]

Alignment

This contig is upended


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rJMSF051P05-                                      GACAGTCCATGAATGGAGAAGGACAACAAGAT
                      ____________________________________________________________
consensus                                         GACAGTCCATGAATGGAGAAGGACAACAAGAT
 
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rJMSF051P05-          CATACAAATGAATATATAACAATAATAATAATGCGCTGAAATGTAACTCCCAAAAGGGGA
                      ____________________________________________________________
consensus             CATACAAATGAATATATAACAATAATAATAATGCGCTGAAATGTAACTCCCAAAAGGGGA
 
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rJMSF051P05-          AAAAAATACTGAAAAATAAGTAGCAATGGAAATGCATAAACAAGAATGGGTACGGTAGGG
                      ____________________________________________________________
consensus             AAAAAATACTGAAAAATAAGTAGCAATGGAAATGCATAAACAAGAATGGGTACGGTAGGG
 
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rJMSF051P05-          CCCATCATCATCTACATCTACCAATCAAGATGGCACCTAGTCCGCTCGAAACTCCCAGAC
                      ____________________________________________________________
consensus             CCCATCATCATCTACATCTACCAATCAAGATGGCACCTAGTCCGCTCGAAACTCCCAGAC
 
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rJMSF051P05-          GATCTGCCGTTGGATTGCAAAGGAACCTTGAGATCGCATTCGATGGTGGGCTTAATCTTC
JMFN006E05+                                                                AATCTTC
                      ____________________________________________________________
consensus             GATCTGCCGTTGGATTGCAAAGGAACCTTGAGATCGCATTCGATGGTGGGCTTAATCTTC
 
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rJMSF051P05-          TTAGTCTTGATCCACCCAATCTTCAGTCTAATTCTCAGGTAAAGCTTGACGTCGATTTCG
JMFN006E05+           TTAGTCTTGATCCACCCAATCTTCAGTCTAATTCTCAGGTAAAGCTTGACGTCGATTTCG
JMFN039E11+                                              CAGGTAAAGCTTGACGTCGATTTCG
JMFN014M18+                                              CAGGTAAAGCTTGACGTCGATTTCG
JMSF051P05+                               CTTCAGTCTAATTCTCAGGTAAAGCTTGACGTCGATTTCG
                      ____________________________________________________________
consensus             TTAGTCTTGATCCACCCAATCTTCAGTCTAATTCTCAGGTAAAGCTTGACGTCGATTTCG
 
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rJMSF051P05-          TAAACCCCGCGGCTCTTCTCGTCGTTGTAGCTATTCCGGTCGCTGGAGTCGAGGGAGACG
JMFN006E05+           TAAACCCCGCGGCTCTTCTCGTCGTTGTAGCTATTCCGGTCGCTGGAGTCGAGGGAGACG
JMFN039E11+           TAAACCCCGCGGCTCTTCTCGTCGTTGTAGCTATTCCGGTCGCTGGAGTCGAGGGAGACG
JMFN014M18+           TAAACNCCGCGGCTCTTCTCGTCGTTGTAGCTATTACGGTCGCTGGAGTCGAGGGAGACG
JMSF051P05+           TAAACCCCGCGGCTCTTCTCGTCGTTGTAGCTATTCCGGTCGCTGGAGTCGAGGGAGACG
                      ____________________________________________________________
consensus             TAAACCCCGCGGCTCTTCTCGTCGTTGTAGCTATTCCGGTCGCTGGAGTCGAGGGAGACG
 
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rJMSF051P05-          ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
JMFN006E05+           ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
JMFN039E11+           ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
JMFN014M18+           ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
JMSF051P05+           ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
                      ____________________________________________________________
consensus             ATGTTATTGCTCCTGAACGCCGTGCTCAGGGCGGTGGTGTTCTTGTGGCCCTGGTAGAAC
 
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rJMSF051P05-          GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAACCCGGAGGCTTCGAAGTGG
JMFN006E05+           GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAACCCGGAGGCTTCGAAGTGG
JMFN039E11+           GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAATCCGGAGGCTTCGAAGTGG
JMFN014M18+           GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAACCCGGAGGCTTCGAAGTGG
JMSF051P05+           GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAACCCGGAGGCTTCGAAGTGG
                      ____________________________________________________________
consensus             GTGGGGAGGTTCTGGGTGCTAAACCGCTGCCCCTTGTAGAACCCGGAGGCTTCGAAGTGG
 
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rJMSF051P05-          TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
JMFN006E05+           TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
JMFN039E11+           TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
JMFN014M18+           TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
JMSF051P05+           TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
                      ____________________________________________________________
consensus             TCGTAGTAGATGCCGATGCGCTTGTTGGGGTTGCGGACGGTGAAGTTGAGGGCGAGGTTG
 
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rJMSF051P05-          TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
JMFN006E05+           TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
JMFN039E11+           TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
JMFN014M18+           TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
JMSF051P05+           TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
                      ____________________________________________________________
consensus             TAGTAGAGGGAGCTGTTGGTGGTGGAGAGGTCGAACTGGGTGAGGGCGGCGTCGTCGACG
 
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rJMSF051P05-          TAGAATTTGACCTTGTTGGGG                                       
JMFN006E05+           TAGAATTTGACCTTGTTGGGGCGGAGGACGAGCCAGAGGGCCAGCGCCACCACGCCCAGA
JMFN039E11+           TAGAATTTGACCTTGTTGGGGCGGAGGACGAGCCAGAGGGCCAGCGCCACCACGCCCAGA
JMFN014M18+           TAGAATTTGACCTTGTTGGGGCGGAGGACGAGCCAGAGGGCCAGCGCCACCACGCCCAGA
JMSF051P05+           TAGAATTTGACCTTGTTGGGGCGGAGGACGAGCCAGAGGGCCAGCGCCACCACGCCCAGA
                      ____________________________________________________________
consensus             TAGAATTTGACCTTGTTGGGGCGGAGGACGAGCCAGAGGGCCAGCGCCACCACGCCCAGA
 
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JMFN006E05+           ACCACCAGGAGGGTGCAGAGGATCTGGCAGAGGCAATTGCAGAGACAGCTGAAGAGGCAG
JMFN039E11+           ACCACCAGGAGGGTGCAGAGGATCTGGCAGAGGCAATTGCAGAGACAGCTGAAGAGGCAG
JMFN014M18+           ACCACCAGGAGGGTGCAGAGGATCTGGCAGAGGCAATTGCAGAGACAGCTGAAGAGGCAG
JMSF051P05+           ACCACCAGGAGGGTGCAGAGGATCTGGCAGAGGCAATTGCAGAGACAGCTGAAGAGGCAG
                      ____________________________________________________________
consensus             ACCACCAGGAGGGTGCAGAGGATCTGGCAGAGGCAATTGCAGAGACAGCTGAAGAGGCAG
 
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JMFN006E05+           CCGCAGGGGTTGCAGCTGCTGCCGCTGCCGGGGCGGTGGTAGGATTTTGCCGGCGGTGGG
JMFN039E11+           CCGCAGGGGTTGCAGCTGCTGCCGCTGCCGGGGCGGTGGTAGGATTTTGCCGGCGGTGGG
JMFN014M18+           CCGCAGGGGTTGCAGCTGCTGCCGCTGCCGGGGCGGTGGTAGGATTTTGCCGGCGGTGGG
JMSF051P05+           CCGCAGGGGTTGCAGCTGCTGCCGCTGCCGGGGCGGTGGTAGGATTTTGCCGGCGGTGGG
                      ____________________________________________________________
consensus             CCGCAGGGGTTGCAGCTGCTGCCGCTGCCGGGGCGGTGGTAGGATTTTGCCGGCGGTGGG
 
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JMFN006E05+           ATGGATGGCCCGTAGTAGGCTCCGTTCAAGTGCGGTTCCGGCATATCTAGAATGGAGCTT
JMFN039E11+           ATGGATGGCCCGTAGTAGGCTCCGTTCAAGTGCGGTTCCGGCATATCTAGAATGGAGCTT
JMFN014M18+           ATGGATGGCCCGTAGTAGGCTCCGTTCAAGTGCGGTTCCGGCATATCTAGAATGGAGCTT
JMSF051P05+           ATGGATGGCCCGTAGTAGGCTCCGTTCAAGTGCGGTTCCGGCATATCTAGAATGGAGCTT
                      ____________________________________________________________
consensus             ATGGATGGCCCGTAGTAGGCTCCGTTCAAGTGCGGTTCCGGCATATCTAGAATGGAGCTT
 
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JMFN006E05+           TTTTAGTCTAGTTGGGTTGAGGCAATTG                                
JMFN039E11+           TTTTAGTCTAGTTGGGTTGAGGCAATTGAAAAAAATTAAAGAAA                
JMFN014M18+           TTTTAGTCTAGTTGGGTTGAGGCAATTGAAAAAAATTAAAGAAA                
JMSF051P05+           TTTTAGTCTAGTTGGGTTGAGGCAATTGAAAAAAATTAAAGAAAGTTGTGAGAATTGATC
                      ____________________________________________________________
consensus             TTTTAGTCTAGTTGGGTTGAGGCAATTGAAAAAAATTAAAGAAAGTTGTGAGAATTGATC