Contig 005315:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF051O07+                                                          TCCCAGCAACCCA
                      ____________________________________________________________
consensus                                                            TCCCAGCAACCCA
 
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JMSF031A05+                          CCATCTTCGCCCAGGCTAACAGGGCCTTACTTATTCAGGGGAGCC
JMSF051O07+           TGGCATTCTTTATCCCCATCTTCGCCCAGGCTAACAGGNCCTTACTTATTCAGGGGAGCC
                      ____________________________________________________________
consensus             TGGCATTCTTTATCCCCATCTTCGCCCAGGCTAACAGGGCCTTACTTATTCAGGGGAGCC
 
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JMSF031A05+           TCGAAAAGCACTGTTGAGAAGAATATCCTTGGCCCCTCTTCATTCTCTACAAGGTTCCAA
JMSF051O07+           TCGAAAAGCACTGTTGAGAAGAATATCCTTGGCCCCTCTTCATTCTCTACAAGGTTCCAA
                      ____________________________________________________________
consensus             TCGAAAAGCACTGTTGAGAAGAATATCCTTGGCCCCTCTTCATTCTCTACAAGGTTCCAA
 
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JMSF031A05+           ACCTTTCTTCAACATAGGTGACAACGAGCCAGGCAGAGATGGAAGAGATCAAACACGGGA
JMSF051O07+           ACCTTTCTTCAACATAGGTGACAACGAGCCAGGCAGAGATGGAAGAGATCAAACACGGGA
                      ____________________________________________________________
consensus             ACCTTTCTTCAACATAGGTGACAACGAGCCAGGCAGAGATGGAAGAGATCAAACACGGGA
 
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JMSF031A05+           ATAAGAAGCATGTTGAAAACTCTTGCGCGAACAAGCTTAGGAAAGAATAGATTTAAGTCT
JMSF051O07+           ATAAGAAGCATGTTGAAAACTCTTGCGCGAACAAGCTTAGGAAAGAATAGATTTAAGTCT
                      ____________________________________________________________
consensus             ATAAGAAGCATGTTGAAAACTCTTGCGCGAACAAGCTTAGGAAAGAATAGATTTAAGTCT
 
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JMSF031A05+           CAATTAGTTGTTGCTTGTTGGAGCAAAGCAAGGAATCCAATGGCTTCTTAAAAGACTTTT
JMSF051O07+           CAATTAGTTGTTGCTTGTTGGAGCAAAGCAAGGAATCCAATGGCTTCTTAAAAGACTTTT
                      ____________________________________________________________
consensus             CAATTAGTTGTTGCTTGTTGGAGCAAAGCAAGGAATCCAATGGCTTCTTAAAAGACTTTT
 
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JMSF031A05+           AGTTGGGATGGAGCTCTTGCTTCAATTTGGTATCAGAGCTAACACCGTGCCAAAGGCCAT
JMSF051O07+           AGTTGGGATGGAGCTCTTGCTTCAATTTGGTATCAGAGCTAACACCGTGCCAAAGGCCAT
                      ____________________________________________________________
consensus             AGTTGGGATGGAGCTCTTGCTTCAATTTGGTATCAGAGCTAACACCGTGCCAAAGGCCAT
 
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JMSF031A05+           AGGTGTGATGGGGCGTGTTGAGCATGAAATTCAACTATCAGTTTAGGCTTTTAGTTGAAA
JMSF051O07+           AGGTGTGATGGGGCGTGTTGAGCATGAAATTCAACTATCAGTTTAGGCTTTTAGTTGAAA
                      ____________________________________________________________
consensus             AGGTGTGATGGGGCGTGTTGAGCATGAAATTCAACTATCAGTTTAGGCTTTTAGTTGAAA
 
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JMSF031A05+           TGGAGGCATAGAGCATATACTTCAATTACCAACCCATTCCAATTCCATCTTGTTCTAGAA
JMSF051O07+           TGGAGGCATAGAGCATATACTTCAATTACCAACCCATTCCAATTCCATCTTGTTCTAGAA
                      ____________________________________________________________
consensus             TGGAGGCATAGAGCATATACTTCAATTACCAACCCATTCCAATTCCATCTTGTTCTAGAA
 
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JMSF031A05+           AGAGTAAAAATCCATTTATAACTGTTCATGCCTGGGACGTCTGGCTTATTGGCGGCGGCG
JMSF051O07+           AGAGTAAAAATCCATTTATAACTGTTCATGCCTGGGACGTCTGGCTTATTGGCGGCGGCG
                      ____________________________________________________________
consensus             AGAGTAAAAATCCATTTATAACTGTTCATGCCTGGGACGTCTGGCTTATTGGCGGCGGCG
 
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JMSF031A05+           GCGCTTCACCGGTGGGGCGGTGGTCGCTGGTGGCTGGCGTCGTTAAATTGTCTCTCTCAT
JMSF051O07+           GCGCTTCACCGGTGGGGCGGTGGTCGCTGGTGGCTGGCGTCGTTAAATTGTCTCTCTCAT
                      ____________________________________________________________
consensus             GCGCTTCACCGGTGGGGCGGTGGTCGCTGGTGGCTGGCGTCGTTAAATTGTCTCTCTCAT
 
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JMSF031A05+           CTCCAGATTGGCTAGAGCTCTGGTCTCTCTCAGGTC                        
JMSF051O07+           CTCCAGATTGGCTAGAGCTCTGGTCTCTCTCAGGTCTGTGGAGGCGACCGATGAACGGTC
                      ____________________________________________________________
consensus             CTCCAGATTGGCTAGAGCTCTGGTCTCTCTCAGGTCTGTGGAGGCGACCGATGAACGGTC