Contig 005313:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017L08Sequence603005313 (3)ref|XP_009787612.1|8e-58PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana sylvest774018012ref|XP_009621647.1|8e-59PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana tomento
JMSF040J03Sequence678005313 (3)ref|XP_006339418.1|4e-73PREDICTED: BTB/POZ and MATH domain-containing protein 2-like isoform X1 [Solanu835001447 (2)ref|XP_009787612.1|2e-77PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana sylvest
JMSF051F10Sequence677005313 (3)ref|XP_006339418.1|1e-56PREDICTED: BTB/POZ and MATH domain-containing protein 2-like isoform X1 [Solanu731001447 (2)ref|XP_009621647.1|2e-56PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040J03+ GAGGTAGGACGATGTTTCA
JMSF051F10+ GAGGTAGGACGATGTTTCA
                      ____________________________________________________________
consensus GAGGTAGGACGATGTTTCA
 
. : . : . : . : . : . :
JMFF017L08+ TACTTGAGTGTG
JMSF040J03+ AACATTGCTCTTCTGAAAAAGCGTTTGTAGCCCCACATACTACCGCCATACTTGAGTGTG
JMSF051F10+ AACATTGCTCTTCTGAAAAAGCGTTTGTAGCCCCACATACTACCGCGATACTTGAGTGTG
                      ____________________________________________________________
consensus AACATTGCTCTTCTGAAAAAGCGTTTGTAGCCCCACATACTACCGCGATACTTGAGTGTG
 
. : . : . : . : . : . :
JMFF017L08+ TAAGGCCCAGTCTCCAAGACCCGTCCGAAATGGGTATGGACCTTATGCCTTTCGTTCCCG
JMSF040J03+ TAAGGCCCAGTCTCCAAGACCCGTCCGAAATGGGTATGGACCTTATGCCTTTCGTTCCCG
JMSF051F10+ TAAGGCCCAGTCTCCAAGACCCGTCCGAAATGGGTATGGACCTTATGCCTTTCGTTCCCG
                      ____________________________________________________________
consensus TAAGGCCCAGTCTCCAAGACCCGTCCGAAATGGGTATGGACCTTATGCCTTTCGTTCCCG
 
. : . : . : . : . : . :
JMFF017L08+ CTCTGATCCATCAACGTCAATTCGAACAGCGCCCGGACGTCGGTGGCATCGCTGGCCAGC
JMSF040J03+ CTCTGATCCATCAACGTCAATTCGAACAGCGCCCGGACGTCGGTGGCATCGCTGGCCAGC
JMSF051F10+ CTCTGATCCATCAACGTCAATTCGAACAGCGCCCGGACGTCGGTGGCATCGCTGGCCAGC
                      ____________________________________________________________
consensus CTCTGATCCATCAACGTCAATTCGAACAGCGCCCGGACGTCGGTGGCATCGCTGGCCAGC
 
. : . : . : . : . : . :
JMFF017L08+ GCAATGAAGAGCGATATATAGGAGGCATTATCCTCCGTGCTCTTGCCGTCCGGGTAAAAA
JMSF040J03+ GCAATGAAGAGCGATATATAGGAGGCATTATCCTCCGTGCTCTTGCCGTCCGGGTAAAAA
JMSF051F10+ GCAATGAAGAGCGATATATAGGAGGCATTATCCTCCGTGCTCTTGCCGTCCGGGTAAAAA
                      ____________________________________________________________
consensus GCAATGAAGAGCGATATATAGGAGGCATTATCCTCCGTGCTCTTGCCGTCCGGGTAAAAA
 
. : . : . : . : . : . :
JMFF017L08+ TAGATCGCCCAATCATACCCTCCCACCGTGAACGTTTCAGACGCGACGTATTTCCCAATT
JMSF040J03+ TAGATCGCCCAATCATACCCTCCCACCGTGAACGTTTCAGACGCGACGTATTTCCCAATT
JMSF051F10+ TAGATCG-CCAATCATACCCTCCCACCGTGAACGTTTCAGACGCGACGTATTTCCCAATT
                      ____________________________________________________________
consensus TAGATCGCCCAATCATACCCTCCCACCGTGAACGTTTCAGACGCGACGTATTTCCCAATT
 
. : . : . : . : . : . :
JMFF017L08+ CCCATCCCCTTCGATAAGGAATACCCCTTGATCTTGAAATCGTGGGACCCGTTGATCGTC
JMSF040J03+ CCCATCCCCTTCGATAAGGAATACCCCTTGATCTTGAAATCGTGGGACCCGTTGATCGTC
JMSF051F10+ CCCATCCCCTTCGATAAGGAATACCCCTTGATCTTGAAATCGTGGGACCCGTTGATCGTC
                      ____________________________________________________________
consensus CCCATCCCCTTCGATAAGGAATACCCCTTGATCTTGAAATCGTGGGACCCGTTGATCGTC
 
. : . : . : . : . : . :
JMFF017L08+ TCTGTCCCGGCAGGTGGAGGTGGTGACGGTGGATTGCGAATTCGAGGACGACGACGCCTC
JMSF040J03+ TCTGT-CCGGCAGGTGGAGGTGGTGACGGTGGATTGCGAATTCGAGGACGACGACGCCTC
JMSF051F10+ TCTGT-CCGGCAGGTGGAGGTGGTGACGGTGGATTGCGAATTCGAGGACGACGACGCCTC
                      ____________________________________________________________
consensus TCTGT-CCGGCAGGTGGAGGTGGTGACGGTGGATTGCGAATTCGAGGACGACGACGCCTC
 
. : . : . : . : . : . :
JMFF017L08+ GGGCTGTTGGTGCTCCGATTGAACCCGGAAAGTATCCATGGAGAGGTAAGATGGAAGCTT
JMSF040J03+ GGGCTGTTGGTGCTCCGATTGAACCCGGAAAGTATGCATGGAGAGGTAAGATGGAAGCTT
JMSF051F10+ GGGCTGTTGGTGCTCCGATTGAACCCGGAAAGTATCCATGGAGAGGTAAGATGGAAGCTT
                      ____________________________________________________________
consensus GGGCTGTTGGTGCTCCGATTGAACCCGGAAAGTATCCATGGAGAGGTAAGATGGAAGCTT
 
. : . : . : . : . : . :
JMFF017L08+ TGGGGATGATGGTGAAGTTGAACAGCGAGCTGGACAGATGGAAATGGCCTGAATCGGATT
JMSF040J03+ TGGGGATGATGGTGAAGTTGAACAGCGAGCTGGACAGATGGAAATGGCCTGAATCGGATT
JMSF051F10+ TGGGGATGATGGTGAAGTTGAACAGCGAGCTGGACAGATGGAAATGGCCTGAATCGGATT
                      ____________________________________________________________
consensus TGGGGATGATGGTGAAGTTGAACAGCGAGCTGGACAGATGGAAATGGCCTGAATCGGATT
 
. : . : . : . : . : . :
JMFF017L08+ GAAAAACAAAAAGCTAGGGTTTTGAGAATTGGGAAATTGGGGGATGATTGGTCGTATTTC
JMSF040J03+ GAAAAACAAAAAGCTAGGGTTTTGAGAATTGGGAAATTGGGGGATGATTGGTCGTATTTC
JMSF051F10+ GAAAAACAAAAAGCTAGGGTTTTGAGAATTGGGAAATTGGGGGATGATTGGTCGTATTTC
                      ____________________________________________________________
consensus GAAAAACAAAAAGCTAGGGTTTTGAGAATTGGGAAATTGGGGGATGATTGGTCGTATTTC
 
. : . : . : . : . : . :
JMFF017L08+ GCAGACGGACCGACGGGGAAGAAGAGCGAGAGAGAAAGTCAAAAAAG
JMSF040J03+ GCAGACGGACCGACGGGGAAGAAGAGCGAGAGAGAAAGTCAAAAAAGTAATAAGAAAA
JMSF051F10+ GCAGACGGACCGACGGGGAAGAAGAGCGAGAGAGAAAGTCAAAAAAGTAATAAGAAAACC
                      ____________________________________________________________
consensus GCAGACGGACCGACGGGGAAGAAGAGCGAGAGAGAAAGTCAAAAAAGTAATAAGAAAACC