Contig 005312:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042C22Sequence751005312 (2)ref|XP_009769722.1|1e-70PREDICTED: EH domain-containing protein 1-like [Nicotiana sylvestris]694021557gb|ABF66638.1|2e-76stearoyl-acyl-carrier protein desaturase [Saussurea involucrata]
JMSF051A19Sequence602005312 (2)ref|XP_006352380.1|2e-43PREDICTED: EH domain-containing protein 1-like [Solanum tuberosum]580020544ref|XP_010270065.1|2e-54PREDICTED: EH domain-containing protein 1 [Nelumbo nucifera]

Alignment

This contig is upended


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JMSF042C22+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMSF042C22+           GTATTGACCCAAAAGCATGATCATGGGTTTAGCATCAAAATCACTATCCGTCAATACTGG
                      ____________________________________________________________
consensus             GTATTGACCCAAAAGCATGATCATGGGTTTAGCATCAAAATCACTATCCGTCAATACTGG
 
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JMSF042C22+           TGACACAAAATCATNGAAACGATATGTAACTTCCAGTGGCTTCAACTTTGCATTGTATAA
                      ____________________________________________________________
consensus             TGACACAAAATCATNGAAACGATATGTAACTTCCAGTGGCTTCAACTTTGCATTGTATAA
 
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JMSF042C22+           TCTCTTTAAACCGTCAATTACAGAAGTGACAGCAGTAAGAGAAGGTTGAACCTTCTTTCT
                      ____________________________________________________________
consensus             TCTCTTTAAACCGTCAATTACAGAAGTGACAGCAGTAAGAGAAGGTTGAACCTTCTTTCT
 
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JMSF042C22+           AGAAGATCTTGAGCTGAACATTNTGANTGATGGTATCGGCCGCAGCGGTATATTTAATGG
                      ____________________________________________________________
consensus             AGAAGATCTTGAGCTGAACATTNTGANTGATGGTATCGGCCGCAGCGGTATATTTAATGG
 
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JMSF042C22+           TATCGGCCGCAGCGGTGTAGTTCCATTTGTGTCTGGCTTGCTACCATTTGTTTGTGGTGG
JMSF051A19+                                                   CTACCATTTGTTTGTGGTGG
                      ____________________________________________________________
consensus             TATCGGCCGCAGCGGTGTAGTTCCATTTGTGTCTGGCTTGCTACCATTTGTTTGTGGTGG
 
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JMSF042C22+           GCTTTCTGTTAGTGAACCACTAGAATTCGGGGATGAACCATTAGCACTTGCAAGTAAAGC
JMSF051A19+           GCTTTCTGTTAGTGAACCACTAGAATTCGGGGATGAACCATTAGCACTTGCAAGTAAAGC
                      ____________________________________________________________
consensus             GCTTTCTGTTAGTGAACCACTAGAATTCGGGGATGAACCATTAGCACTTGCAAGTAAAGC
 
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JMSF042C22+           ATCCAAATCTTTCATGGTTGGAGGGCTCACACCAGCTGCAGTCTTAAGGTTGAGGAGATC
JMSF051A19+           ATCCAAATCTTTCATGGTTGGAGGGCTCACACCAGCTGCAGTCTTAAGGTTGAGGAGATC
                      ____________________________________________________________
consensus             ATCCAAATCTTTCATGGTTGGAGGGCTCACACCAGCTGCAGTCTTAAGGTTGAGGAGATC
 
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JMSF042C22+           TGAGTTTAGCTCTTCCCCTTNTTGTGCCAAAGATATCAACTGCATGGCAGTAGTAAACTC
JMSF051A19+           TGAGTTTAGCTCTTCCCCTTCTTGTGCCAAAGATATCAACTGCATGGCAGTAGTAAACTC
                      ____________________________________________________________
consensus             TGAGTTTAGCTCTTCCCCTTCTTGTGCCAAAGATATCAACTGCATGGCAGTAGTAAACTC
 
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JMSF042C22+           ATTGATGCCTAAAAACCCTTGTCGTTTGGAATCAGCAAGAGCCCAAACCTGCTTGAGTTG
JMSF051A19+           ATTGATGCCTAAAAACCCTTGTCGTTTGGAATCAGCAAGAGCCCAAACCTGCTTGAGTTG
                      ____________________________________________________________
consensus             ATTGATGCCTAAAAACCCTTGTCGTTTGGAATCAGCAAGAGCCCAAACCTGCTTGAGTTG
 
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JMSF042C22+           AGGCTTANTAAGATCCGACATGCCAAAAAGCTTGGTCGCATCATTTCCAGTAACCCGACC
JMSF051A19+           AGGCTTACTAAGATCCGACATGCCAAAAAGCTTGGTCGCATCATTTCCAGTAACCCGACC
                      ____________________________________________________________
consensus             AGGCTTACTAAGATCCGACATGCCAAAAAGCTTGGTCGCATCATTTCCAGTAACCCGACC
 
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JMSF042C22+           ATCTCCATCTGAATCGGCGAAGTTAAACCAGTCCTGAAACAGTTTCTGCTGCTCTTTGGA
JMSF051A19+           ATCTCCATCTGAATCGGCGAAGTTAAACCAGTCCTGAAACAGTTTCTGCTGCTCTTTGGA
                      ____________________________________________________________
consensus             ATCTCCATCTGAATCGGCGAAGTTAAACCAGTCCTGAAACAGTTTCTGCTGCTCTTTGGA
 
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JMSF042C22+           GCAGGAAGTGAAGGGACCTGACTGCGATTTCCATATCTATCTATCAGAGTATAGAAAGGA
JMSF051A19+           GCAGGAAGTGAAGGGACCTGA-TGCGATTTCCATATCTATCTATCAGAGTATAGAAAGGA
                      ____________________________________________________________
consensus             GCAGGAAGTGAAGGGACCTGACTGCGATTTCCATATCTATCTATCAGAGTATAGAAAGGA
 
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JMSF042C22+           AAGTGCCCTGTGAACTCTCCAGTGAGTTT                               
JMSF051A19+           AAGTGCCCTGTGAACTCTCCAGTGAGTTTGAAGTTTGCTGTACCGCTCAAAGAGGGAATC
                      ____________________________________________________________
consensus             AAGTGCCCTGTGAACTCTCCAGTGAGTTTGAAGTTTGCTGTACCGCTCAAAGAGGGAATC