Contig 005305:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024F03Sequence560005305 (3)ref|XP_009797124.1|3e-35PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chl490002149 (15)gb|ABR25654.1|4e-42synaptic glycoprotein sc2 [Oryza sativa Indica Group]
JMSF034E22Sequence687005305 (3)ref|XP_006355235.1|2e-91PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chl571002920 (2)emb|CDP18075.1|2e-65unnamed protein product [Coffea canephora]
JMSF049O21Sequence689005305 (3)ref|XP_006355235.1|6e-56PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chl663002920 (2)emb|CDP18075.1|4e-95unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034E22+ CCGAAGATATTTTGCTGAAAACAGCTTCAAGAGGTTGGCCCAATTCCTC
                      ____________________________________________________________
consensus CCGAAGATATTTTGCTGAAAACAGCTTCAAGAGGTTGGCCCAATTCCTC
 
. : . : . : . : . : . :
JMSF034E22+ TTCTATGATGTTGAAAGCAACCTGATTAGGAAAAGGAGGAACATCATCCTGAAGAATGCA
                      ____________________________________________________________
consensus TTCTATGATGTTGAAAGCAACCTGATTAGGAAAAGGAGGAACATCATCCTGAAGAATGCA
 
. : . : . : . : . : . :
JMSF034E22+ AAGTTCATTCATGTAATCTTGTCTAATAATATCAGGCCTATTTGCAAGCACCTGTCCAGC
JMSF049O21+ ATCAGGCCTATTTGCAAGCACCTGTCCAGC
                      ____________________________________________________________
consensus AAGTTCATTCATGTAATCTTGTCTAATAATATCAGGCCTATTTGCAAGCACCTGTCCAGC
 
. : . : . : . : . : . :
JMSF034E22+ TTTGATGAAAGAAGGCCCCAAGTCACACAAGAGTTGCCTAAGCTGGCGAGCACGGAAAGG
JMSF049O21+ TTTGATGAAAGAAGGCCCCAAGTTACACAAGAGTTGCCTAAGCTGGCGAGCACGGAAAGG
                      ____________________________________________________________
consensus TTTGATGAAAGAAGGCCCCAAGTTACACAAGAGTTGCCTAAGCTGGCGAGCACGGAAAGG
 
. : . : . : . : . : . :
JMSF034E22+ AACAACTTCTTGATCACGACCCACAACATAATCATACACTAAACTCGTCCAATAAAGCCC
JMSF024F03+ CTTCTTGATCACGACCCACAACATAATCATACACTAAACTCGTCCAATAAAGCCC
JMSF049O21+ AACAACTTCTTGATCACGACCCACAACATAATCATACACTAAACTCGTCCAATAAAGCCC
                      ____________________________________________________________
consensus AACAACTTCTTGATCACGACCCACAACATAATCATACACTAAACTCGTCCAATAAAGCCC
 
. : . : . : . : . : . :
JMSF034E22+ CAAATTCCATACTATCTCTACCCCTCTACCAATCAAGGATAATATTGCCCCCCTTGACTC
JMSF024F03+ CAAATTCCATACTATCTCTACCCCTCTACCAATCAAGGATAATATTGCCCCCCTTGACTC
JMSF049O21+ CAAATTCCATACTATCCCTACCCCTCTACCAATCAAGGATAATATTGCCCCCCTTGACTC
                      ____________________________________________________________
consensus CAAATTCCATACTATCTCTACCCCTCTACCAATCAAGGATAATATTGCCCCCCTTGACTC
 
. : . : . : . : . : . :
JMSF034E22+ CAAAACCTTATTTTTCACTGATTCGGGGGAGTATTTGCGGAAGGGAATGCAAACTCCACG
JMSF024F03+ CAAAACCTTATTTTTCACTGATTCGGGGGAGTATTNGCGGAAGGGAATGCAAACTCCACG
JMSF049O21+ CAAAACCTTATTTTTCACTGATTCGGGGGAGTATTTGCGGAAGGGAATGCAAACTCCACG
                      ____________________________________________________________
consensus CAAAACCTTATTTTTCACTGATTCGGGGGAGTATTTGCGGAAGGGAATGCAAACTCCACG
 
. : . : . : . : . : . :
JMSF034E22+ CTCGATATCGAGCTGGTCGAGAGCGCTGTTGGTGAAAGGATCTTTGGGTTCCAATTTTAG
JMSF024F03+ CTCGATATCGAGCTGGTCGAGAGCGCTGTTGGTGAAAGGATCTTTGGGTTCCAATTTTAG
JMSF049O21+ CTCGATATCGAGCTGGTCGAGAGCGCTGTTGGTGAAAGGATCTTTGGGTTCCAATTTTAG
                      ____________________________________________________________
consensus CTCGATATCGAGCTGGTCGAGAGCGCTGTTGGTGAAAGGATCTTTGGGTTCCAATTTTAG
 
. : . : . : . : . : . :
JMSF034E22+ TGATTGGATGGATTCCTGAGTGGAAGAGGTGTTGACTGCGTAGATACTGGGCGACGAGAA
JMSF024F03+ TGATTGGATGGATTCCTGAGTGGAAGAGGTGTTGACTGCGTAGATACTGGGCGACGAGAA
JMSF049O21+ TGATTGGATGGATTCCTGAGTGGAAGAGGTGTTGACTGCGTAGATACTGGGCGACGAGAA
                      ____________________________________________________________
consensus TGATTGGATGGATTCCTGAGTGGAAGAGGTGTTGACTGCGTAGATACTGGGCGACGAGAA
 
. : . : . : . : . : . :
JMSF034E22+ GCGCTTCGGGGGCTTAACGGGACCAAAAAGTAGCTTCTTGCTTTTTCTCTTGCATTGAAT
JMSF024F03+ GCGCTTCGGGGGCTTAACGGGACCAAAAAGTAGCTTCTTGCTTTTTCTCTTGCATTGAAT
JMSF049O21+ GCGCTTCGGGGGCTTAACGGGACCAAAAAGTAGCTTCTTGCTTTTTCTCTTGCATTGAAT
                      ____________________________________________________________
consensus GCGCTTCGGGGGCTTAACGGGACCAAAAAGTAGCTTCTTGCTTTTTCTCTTGCATTGAAT
 
. : . : . : . : . : . :
JMSF034E22+ TTCAGTGGAAGGTAATGAAGAAGAAGAAGAAGAAGAGTAGAAGCAGCTTGAGCTGCAAAC
JMSF024F03+ TTCAGTGNAAGGTAATGAAGAAGAAGAAGAAGAAGAGTAGAAGCAGCTTGAGCTGCAAAC
JMSF049O21+ TTCAGTGGAAGGTAATGAAGAAGAAGAAGAAGAAGAGTAGAAGCAGCTTGAGCTGCAAAC
                      ____________________________________________________________
consensus TTCAGTGGAAGGTAATGAAGAAGAAGAAGAAGAAGAGTAGAAGCAGCTTGAGCTGCAAAC
 
. : . : . : . : . : . :
JMSF034E22+ CACCACTCCCATGGCTCCTCTCTCTCTGCCTTGTCTT
JMSF024F03+ CACCACTCCCATGGCTCCTCTCTCTCTGCCTTGTCTTAGTTAGAATATGGAAGGAAATGA
JMSF049O21+ CACCACTCCCATGGCTCCTCTCTCTCTGCCTTGTCTTAGTTAGAATATGGAAGGAAATGA
                      ____________________________________________________________
consensus CACCACTCCCATGGCTCCTCTCTCTCTGCCTTGTCTTAGTTAGAATATGGAAGGAAATGA
 
. : . : . : . : . : . :
JMSF024F03+ AAAGAGGAAAATTGGGAGACGCATAAAGGGAAGGGGATGATGAGCGGTACTGTTTGTGGT
JMSF049O21+ AAAGAGGAAAATTGGGAGACGCATAAAGGGAAGGGGATGATGAGCGGTA-TGTTTGTGGT
                      ____________________________________________________________
consensus AAAGAGGAAAATTGGGAGACGCATAAAGGGAAGGGGATGATGAGCGGTACTGTTTGTGGT
 
. : . : . : . : . : . :
JMSF024F03+ GGANTTCTNTCAGCTTCCACT
JMSF049O21+ GGATTTCTTTCAGCTTCCACTTGTGCAAATCGAGTGGCTTCAGCTTCAGATTGGCTGCCC
                      ____________________________________________________________
consensus GGATTTCTTTCAGCTTCCACTTGTGCAAATCGAGTGGCTTCAGCTTCAGATTGGCTGCCC