Contig 005304:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS144A07+                                                TCATTGCTATGTGGTACTGAGTA
JMSF049M18+                                                   TTGCTATGTGGTACTGAGTA
                      ____________________________________________________________
consensus                                                  TCATTGCTATGTGGTACTGAGTA
 
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JMFS144A07+           TTCCACAGTTTGATGATGTCCCCAGTTTGCATTTCCCCAGTCCTGATTCGCATGAGGGTA
JMSF049M18+           TTCCACAGTTTGATGATGTCCCCAGTTTGCATTTCCCCAGTCCTGATTCGCATGAGGGTA
                      ____________________________________________________________
consensus             TTCCACAGTTTGATGATGTCCCCAGTTTGCATTTCCCCAGTCCTGATTCGCATGAGGGTA
 
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JMFS144A07+           GGATTGTGGAACTTGAGGAGGAAGATTAGGCCGAGTTGGAAGGGGAGGGGGGTAGTGGCT
JMSF049M18+           GGATTGTGGAACTTGAGGAGGAAGATTAGGCCGAGTTGGAAGGGGAGGGGGGTAGTGGCT
                      ____________________________________________________________
consensus             GGATTGTGGAACTTGAGGAGGAAGATTAGGCCGAGTTGGAAGGGGAGGGGGGTAGTGGCT
 
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JMFS144A07+           ATGCGGAAGAGGGTGGGAAGGATAAGGGGCATGTGGAGGCGCAGGATATGGAGGAGGAAG
JMSF049M18+           ATGCGGAAGAGGGTGGGAAGGATAAGGGGCATGTGGAGGCGCAGGATATGGAGGAGGAAG
                      ____________________________________________________________
consensus             ATGCGGAAGAGGGTGGGAAGGATAAGGGGCATGTGGAGGCGCAGGATATGGAGGAGGAAG
 
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JMFS144A07+           CGGGCCCCACTGCTGTGAAGGATGAGCAGGTGGAGGAGAAGGAGAATGCTGCGATGGCGG
JMSF049M18+           CGGGCCCCACTGCTGTGAAGGATGAGCAGGTGGAGGAGAAGGAGAATGCTGCGATGGCGG
                      ____________________________________________________________
consensus             CGGGCCCCACTGCTGTGAAGGATGAGCAGGTGGAGGAGAAGGAGAATGCTGCGATGGCGG
 
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JMFS144A07+           ATGGTACTGGAATTGCGGAGAGTACCAAGAGTTGGGTGGAGGAACTGGCGGCCTCTGAGA
JMSF049M18+           ATGGTACTGGAATTGCGGAGAGTACCAAGAGTTGGGTGGAGGAACTGGCGGCCTCTGAGA
                      ____________________________________________________________
consensus             ATGGTACTGGAATTGCGGAGAGTACCAAGAGTTGGGTGGAGGAACTGGCGGCCTCTGAGA
 
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JMFS144A07+           TTGCGGTGGTGGCGGTGGTGGTGGATAGTGAGGATCCGCCATGGACGGCGGAGGAGGAGG
JMSF049M18+           TTGCGGTGGTGGCGGTGGTGGTGGATAGTGAGGATCCGCCATGGACGGCGGAGGAGGAGG
                      ____________________________________________________________
consensus             TTGCGGTGGTGGCGGTGGTGGTGGATAGTGAGGATCCGCCATGGACGGCGGAGGAGGAGG
 
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JMFS144A07+           AAGCGGCAGTCGGTTATAGCCGTGAGGATGTTGGAAGTCCATAAATTATATTATAAATCC
JMSF049M18+           AAGCGGCAGTCGGTTATAGCCGTGAGGATGTTGGAAGTCCATAAATTATATTATAAATCC
                      ____________________________________________________________
consensus             AAGCGGCAGTCGGTTATAGCCGTGAGGATGTTGGAAGTCCATAAATTATATTATAAATCC
 
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JMFS144A07+           TACGGATTAGGGTTTAAGGTTTGGAAGAAGAATTACTTGCCAAGCATTTGTTGGTTGCGA
JMSF049M18+           TACGGATTAGGGTTTAAGGTTTGGAAGAAGAATTACTTGCCAAGCATTTGTTGGTTGCGA
                      ____________________________________________________________
consensus             TACGGATTAGGGTTTAAGGTTTGGAAGAAGAATTACTTGCCAAGCATTTGTTGGTTGCGA
 
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JMFS144A07+           CGGGTGGCGGGGGTGGCGGTGGCGGCGCCGGCGGTGAAAATGGAAGAAAGAGTGAGAGAT
JMSF049M18+           CGGGTGGCGGGGGTGGCGGTGGCGGCGCCGGCGGTGAAAATGGAAGAAAGAGTGAGAGAT
                      ____________________________________________________________
consensus             CGGGTGGCGGGGGTGGCGGTGGCGGCGCCGGCGGTGAAAATGGAAGAAAGAGTGAGAGAT
 
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JMFS144A07+           GGAGGGAGGGATTACAAAATTACGGCGAACCTGCAGCTAGAGAATG              
JMSF049M18+           GGAGGGAGGGATTACAAAATTACGGCGAACCTGCAGCTAGAGAATGCATCTCCTCTCCTC
                      ____________________________________________________________
consensus             GGAGGGAGGGATTACAAAATTACGGCGAACCTGCAGCTAGAGAATGCATCTCCTCTCCTC