| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS001D10 | Sequence | 603 | 005300 (4) | ref|XP_009761121.1| | 6e-70 | PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris] | |||||
| JMSF016I14 | Sequence | 552 | 005300 (4) | ref|XP_009761121.1| | 2e-55 | PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris] | 795 | 007079 (3) | ref|XP_009761121.1| | 2e-55 | PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris] |
| JMSF037P22 | Sequence | 708 | 005300 (4) | ref|XP_009761121.1| | 1e-73 | PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris] | 665 | 007079 (3) | ref|XP_009761121.1| | 3e-70 | PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris] |
| JMSF049C15 | Sequence | 672 | 005300 (4) | ref|XP_006396207.1| | 7e-27 | hypothetical protein EUTSA_v10028676mg [Eutrema salsugineum] gb|ESQ37660.1| hypo | 762 | 007079 (3) | ref|XP_011090700.1| | 7e-94 | PREDICTED: transducin beta-like protein 2 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF037P22+ ACTCCCATCAGCAGTACCATAAGTAGCCTTGGTACTA
____________________________________________________________
consensus ACTCCCATCAGCAGTACCATAAGTAGCCTTGGTACTA
. : . : . : . : . : . :
JMSF037P22+ AACAGAGTGAGGACAGCCCTCTGGTCATGGATTTTATGGTGCTCCCATTTCATTTCTGGT
____________________________________________________________
consensus AACAGAGTGAGGACAGCCCTCTGGTCATGGATTTTATGGTGCTCCCATTTCATTTCTGGT
. : . : . : . : . : . :
JMSF037P22+ AGAGGCAACTTGGTCTGTTGTGTGCCATCAGTGGCTGCTTTTGGTTCCCCATACATGTAT
____________________________________________________________
consensus AGAGGCAACTTGGTCTGTTGTGTGCCATCAGTGGCTGCTTTTGGTTCCCCATACATGTAT
. : . : . : . : . : . :
JMSF037P22+ AGAGAGGAACCAGAAAAGGCTGGGCATGCTACAACTATTGAAGATTTTTCATCAGCAAAT
____________________________________________________________
consensus AGAGAGGAACCAGAAAAGGCTGGGCATGCTACAACTATTGAAGATTTTTCATCAGCAAAT
. : . : . : . : . : . :
JMSF037P22+ GCAACTGCAGATGTATGACCTCCAGCAGGTAAATTAATCCTCAAAAACTTAAAGCTTTAC
____________________________________________________________
consensus GCAACTGCAGATGTATGACCTCCAGCAGGTAAATTAATCCTCAAAAACTTAAAGCTTTAC
. : . : . : . : . : . :
JMSF037P22+ TTGTCGCATCATCCAACTTGAATACCCTCACAATTCCATCCGCACAAGCAGTCGCCAAAC
JMSF016I14+ CAGTCGCCAAAC
JMFS001D10+ CAGTCGCCAAAC
JMSF049C15+ CAGTCGCCAAAC
____________________________________________________________
consensus TTGTCGCATCATCCAACTTGAATACCCTCACAATTCCATCCGCACAAGCAGTCGCCAAAC
. : . : . : . : . : . :
JMSF037P22+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMSF016I14+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMFS001D10+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMSF049C15+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
____________________________________________________________
consensus TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
. : . : . : . : . : . :
JMSF037P22+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMSF016I14+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMFS001D10+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMSF049C15+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
____________________________________________________________
consensus TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
. : . : . : . : . : . :
JMSF037P22+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMSF016I14+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMFS001D10+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMSF049C15+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
____________________________________________________________
consensus ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
. : . : . : . : . : . :
JMSF037P22+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMSF016I14+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMFS001D10+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMSF049C15+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
____________________________________________________________
consensus AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
. : . : . : . : . : . :
JMSF037P22+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMSF016I14+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMFS001D10+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMSF049C15+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
____________________________________________________________
consensus TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
. : . : . : . : . : . :
JMSF037P22+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMSF016I14+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMFS001D10+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMSF049C15+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
____________________________________________________________
consensus CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
. : . : . : . : . : . :
JMSF037P22+ GAATTTCAGT
JMSF016I14+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAAC
JMFS001D10+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAA
JMSF049C15+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAACAGTCC
____________________________________________________________
consensus GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAACAGTCC