Contig 005297:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050N04Sequence641005297 (3)ref|XP_009621313.1|5e-60PREDICTED: glycerol-3-phosphate acyltransferase 3 [Nicotiana tomentosiformis]580012485 (3)emb|CDP14512.1|3e-98unnamed protein product [Coffea canephora]
JMSF012M23Sequence231005297 (3)717012485 (3)emb|CDP14512.1|3e-150unnamed protein product [Coffea canephora]
JMSF048P02Sequence677005297 (3)ref|XP_009621313.1|1e-67PREDICTED: glycerol-3-phosphate acyltransferase 3 [Nicotiana tomentosiformis]730012485 (3)emb|CDP14512.1|3e-149unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF048P02+                                                      GAGTCTATCATGGCCCN
                      ____________________________________________________________
consensus                                                        GAGTCTATCATGGCCCN
 
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JMFF050N04+                             GAATGTAGCATGACAAGAATATTATCCATCCTACTGTCAAAA
JMSF048P02+           TGAGCAGAAAATGCACAGGAATGTAGCATGACAAGAATATTATCCATCCTACTGTCAAAA
                      ____________________________________________________________
consensus             TGAGCAGAAAATGCACAGGAATGTAGCATGACAAGAATATTATCCATCCTACTGTCAAAA
 
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JMFF050N04+           CAATAGCCCTTAATGGGAAAAGAAGTCCATATCTGACTACAACACCCAAACACCACAAAG
JMSF048P02+           CAATAGCCCTTAATGGGAAAAGAAGTCCATATCTGACTACAACACCCAAACACCACAAAG
                      ____________________________________________________________
consensus             CAATAGCCCTTAATGGGAAAAGAAGTCCATATCTGACTACAACACCCAAACACCACAAAG
 
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JMFF050N04+           GAAACAAATAAATGTTCCAGTTCCAAGTTTCAGGAGGATTAGACTTGAAGCATCTTGTAA
JMSF048P02+           GAAACAAATAAATGTTCCAGTTCCAAGTTTCAGGAGGATTAGACTTGAAGCATCTTGTAA
                      ____________________________________________________________
consensus             GAAACAAATAAATGTTCCAGTTCCAAGTTTCAGGAGGATTAGACTTGAAGCATCTTGTAA
 
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JMFF050N04+           AGGAATCATCTACAATGGCACCGGCAGCCTCAGTAAGAGTAGGCGAAATATCCAGCAAAT
JMSF048P02+           AGGAATCATCTACAATGGCACCGGCAGCCTCAGTAAGAGTAGGCGAAATATCCAGCAAAT
                      ____________________________________________________________
consensus             AGGAATCATCTACAATGGCACCGGCAGCCTCAGTAAGAGTAGGCGAAATATCCAGCAAAT
 
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JMFF050N04+           CACGGAGGCGAAGCTTGCCGAGAGGCTCATGAATGGATCCGGTGGGAAGATAGTCTTCCA
JMSF048P02+           CACGGAGGCGAAGCTTGCCGAGAGGCTCATGAATGGATCCGGTGGGAAGATAGTCTTCCA
                      ____________________________________________________________
consensus             CACGGAGGCGAAGCTTGCCGAGAGGCTCATGAATGGATCCGGTGGGAAGATAGTCTTCCA
 
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JMFF050N04+           GGTTGGGTCGATCCAGCTCCAATTCCGACCTCGACGTCGCCAGAACCCTACTCATCCTCT
JMSF048P02+           GGTTGGGTCGATCCAGCTCCAATTCCGACCTCGACGTCGCCAGAACCCTACTCATCCTCT
                      ____________________________________________________________
consensus             GGTTGGGTCGATCCAGCTCCAATTCCGACCTCGACGTCGCCAGAACCCTACTCATCCTCT
 
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JMFF050N04+           TCCCACACTATGCTATACTGCTCCTCCTGCTCTTTGCCTACAATTTTGCACCACTATTCT
JMSF048P02+           TCCCACACTATGCTATACTGCTCCTCCTGCTCTTTGCCTACAATTTTGCACCACTATTCT
                      ____________________________________________________________
consensus             TCCCACACTATGCTATACTGCTCCTCCTGCTCTTTGCCTACAATTTTGCACCACTATTCT
 
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JMSF012M23+              AATCTCCGCCAACAGCGATTCCGATTCCAATTCCTATTCCTATTCCTTGCCCAATTC
JMFF050N04+           TCCAATCTCCGCCAACAGCGATTCCGATTCCAATTCCTATTCCTATTCCTTGCCCAATTC
JMSF048P02+           TCCAATCTCCGCCAACAGCGATTCCGATTCCAATTCCTATTCCTATTCCTTGCCCAATTC
                      ____________________________________________________________
consensus             TCCAATCTCCGCCAACAGCGATTCCGATTCCAATTCCTATTCCTATTCCTTGCCCAATTC
 
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JMSF012M23+           CTATTCCTATTCCTATTCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTCCCAAAAGTTTAA
JMFF050N04+           CTATTCCTATTCCTATTCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTCCCAAAAGTTTAA
JMSF048P02+           CTATTCCTATTCCTATTCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTCCCAAAAGTTTAA
                      ____________________________________________________________
consensus             CTATTCCTATTCCTATTCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTCCCAAAAGTTTAA
 
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JMSF012M23+           TCACCAACCCAGGCCCCGACACCCGGGCTCGCCCTATTCCTATTCGTATTTCGTAGTAGT
JMFF050N04+           TCCCCAACCCAGGCCCCGACACCCGGGCTCGCCCTATTCCTATTCGTATTTCGTAGTAGT
JMSF048P02+           TCCCCAACCCAGGCCCCGACACCCGGGCTCGCCCTATTCCTATTCGTATTTCGTAGTAGT
                      ____________________________________________________________
consensus             TCCCCAACCCAGGCCCCGACACCCGGGCTCGCCCTATTCCTATTCGTATTTCGTAGTAGT
 
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JMSF012M23+           AGAGGCTTAGTGCACGTCACAGGACACAGATGCACCAACACAGCTTCAAATCT       
JMFF050N04+           AGAGGCTTAGTGCACGTCACAGGACACAGATGCACCAACACAGCTTCAAATCT       
JMSF048P02+           AGAGGCTTAGTGCACGTCACAGGACACAGATGCACCAACACAGCTTCAAATCTTCAATCC
                      ____________________________________________________________
consensus             AGAGGCTTAGTGCACGTCACAGGACACAGATGCACCAACACAGCTTCAAATCTTCAATCC