Contig 005296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012C18Sequence567005296 (4)dbj|BAD95645.1|3e-18metallothionein-like type 2 protein [Ipomoea batatas]
JMFN017L18Sequence567005296 (4)dbj|BAD95645.1|3e-18metallothionein-like type 2 protein [Ipomoea batatas]
JMFN020D07Sequence538005296 (4)dbj|BAD95645.1|6e-18metallothionein-like type 2 protein [Ipomoea batatas]
JMSF048N16Sequence606005296 (4)dbj|BAD95645.1|4e-18metallothionein-like type 2 protein [Ipomoea batatas]245022663dbj|BAD95645.1|5e-04metallothionein-like type 2 protein [Ipomoea batatas]

Alignment

This contig is upended


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JMFN020D07+                            AGGTAGAAATTATGAGCTCTATTGATTGATAACATATATAATT
JMFN012C18+                             GGTAGAAATTATGAGCTCTATTGATTGATAACATATATAATT
JMFN017L18+                             GGTAGAAATTATGAGCTCTATTGATTGATAACATATATAATT
                      ____________________________________________________________
consensus                              AGGTAGAAATTATGAGCTCTATTGATTGATAACATATATAATT
 
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JMFN020D07+           TGTTTCAATACATTTCAATCTCCCTCAGCTCTCACAATTTCAATACCCAACCCAAACGTA
JMFN012C18+           TGTTTCAATACATTTCAATCTCCCTCAGCTCTCACAATTTCAATACCCAACCCAAACGTA
JMFN017L18+           TGTTTCAATACATTTCAATCTCCCTCAGCTCTCACAATTTCAATACCCAACCCAAACGTA
                      ____________________________________________________________
consensus             TGTTTCAATACATTTCAATCTCCCTCAGCTCTCACAATTTCAATACCCAACCCAAACGTA
 
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JMFN020D07+           ACATATCAGAATGAAAGACACAAACATCAGATAATTAAGAGGCACCAGACACTGCACCAC
JMFN012C18+           ACATATCAGAATGAAAGACACAAACATCAGATAATTAAGAGGCACCAGACACTGCACCAC
JMFN017L18+           ACATATCAGAATGAAAGACACAAACATCAGATAATTAAGAGGCACCAGACACTGCACCAC
                      ____________________________________________________________
consensus             ACATATCAGAATGAAAGACACAAACATCAGATAATTAAGAGGCACCAGACACTGCACCAC
 
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JMFN020D07+           ACAATTCCAAGAATTGCACCTGTCCAGTACACTCCACCTTATTATATTATTATTAAACTC
JMFN012C18+           ACAATTCCAAGAATTGCACCTGTCCAGTACACTCCACCTTATTATATTATTATTAAACTC
JMFN017L18+           ACAATTCCAAGAATTGCACCTGTCCAGTACACTCCACCTTATTATATTATTATTAAACTC
JMSF048N16+                                                          TATTATTAAACTC
                      ____________________________________________________________
consensus             ACAATTCCAAGAATTGCACCTGTCCAGTACACTCCACCTTATTATATTATTATTAAACTC
 
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JMFN020D07+           ACACACGACAACATAGTTATTAGTTTGTTTGGTCAACAGTTGCAAGGGTTGCATTTGCAG
JMFN012C18+           ACACACGACAACATAGTTATTAGTTTGTTTGGTCAACAGTTGCAAGGGTTGCATTTGCAG
JMFN017L18+           ACACACGACAACATAGTTATTAGTTTGTTTGGTCAACAGTTGCAAGGGTTGCATTTGCAG
JMSF048N16+           ACACACGACAACATAGTTATTAGTTTGTTTGGTCAACAGTTGCAAGGGTTGCATTTGCAG
                      ____________________________________________________________
consensus             ACACACGACAACATAGTTATTAGTTTGTTTGGTCAACAGTTGCAAGGGTTGCATTTGCAG
 
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JMFN020D07+           TTATCTCCGCACTTGCATGCATGTCCTCCCTCTGTTGCCTTCTCAGCTCCTCCCTCAAAG
JMFN012C18+           TTATCTCCGCACTTGCATGCATGTCCTCCCTCTGTTGCCTTCTCAGCTCCTCCCTCAAAG
JMFN017L18+           TTATCTCCGCACTTGCATGCATGTCCTCCCTCTGTTGCCTTCTCAGCTCCTCCCTCAAAG
JMSF048N16+           TTATCTCCGCACTTGCATGCATGTCCTCCCTCTGTTGCCTTCTCAGCTCCTCCCTCAAAG
                      ____________________________________________________________
consensus             TTATCTCCGCACTTGCATGCATGTCCTCCCTCTGTTGCCTTCTCAGCTCCTCCCTCAAAG
 
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JMFN020D07+           CTGTTCTTCATTGGTGCAACGCCCTGGATGAGGCTGCTCACACTGCTGGGCTTCTCAACA
JMFN012C18+           CTGTTCTTCATTGGTGCAACGCCCTGGATGAGGCTGCTCACACTGCTGGGCTTCTCAACA
JMFN017L18+           CTGTTCTTCATTGGTGCAACGCCCTGGATGAGGCTGCTCACACTGCTGGGCTTCTCAACA
JMSF048N16+           CTGTTCTTCATTGGTGCAACGCCCTGGATGAGGCTGCTCACACTGCTGGGCTTCTCAACA
                      ____________________________________________________________
consensus             CTGTTCTTCATTGGTGCAACGCCCTGGATGAGGCTGCTCACACTGCTGGGCTTCTCAACA
 
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JMFN020D07+           TCAGCGTCAATCCCAAATCCTCGACAATTGCAGCTGCTGCCGCACGAGCAGCTAGAGCCG
JMFN012C18+           TCAGCGTCAATCCCAAATCCTCGACAATTGCAGCTGCTGCCGCACGAGCAGCTAGAGCCG
JMFN017L18+           TCAGCGTCAATCCCAAATCCTCGACAATTGCAGCTGCTGCCGCACGAGCAGCTAGAGCCG
JMSF048N16+           TCAGCGTCAATCCCAAATCCTCGACAATTGCAGCTGCTGCCGCACGAGCAGCTAGAGCCG
                      ____________________________________________________________
consensus             TCAGCGTCAATCCCAAATCCTCGACAATTGCAGCTGCTGCCGCACGAGCAGCTAGAGCCG
 
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JMFN020D07+           CAGTTACATTTTCCGCTGGAGCAAGACATGGTTTGTACGAAAGTTGAAGTAAGAAGATTG
JMFN012C18+           CAGTTACATTTTCCGCTGGAGCAAGACATGGTTTGTACGAAAGTTGAAGT-AGAAGATTG
JMFN017L18+           CAGTTACATTTTCCGCTGGAGCAAGACATGGTTTGTAAGAAAGTTGAAGT-AGAAGATTG
JMSF048N16+           CAGTTACATTTTCCGCTGGAGCAAGACATGGTTTGTACGAAAGTTGAAGT-AGAAGATTG
                      ____________________________________________________________
consensus             CAGTTACATTTTCCGCTGGAGCAAGACATGGTTTGTACGAAAGTTGAAGT-AGAAGATTG
 
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JMFN020D07+           GGGTTTTGCAGTGGA                                             
JMFN012C18+           GGGTTTTGCAGTGGATAAATGTTTGATTGAATATAATGTTGTATTG              
JMFN017L18+           GGGTTTTGCAGTGGATAAATGTTTGATTGAATATAATGTTGTATTG              
JMSF048N16+           GGGTTTTGCAGTGGATAAATGTTTGATTGAATATAATGTTGTATTGGCTTGTGTATGTCC
                      ____________________________________________________________
consensus             GGGTTTTGCAGTGGATAAATGTTTGATTGAATATAATGTTGTATTGGCTTGTGTATGTCC