Contig 005294:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS105E09+                                                 GAACATAAGTTCAGTTTCTTTA
                      ____________________________________________________________
consensus                                                   GAACATAAGTTCAGTTTCTTTA
 
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JMFS105E09+           TGAATAAACTTTGCTTCTCGGAATTGGGAACATCTCTAAAACTCGGCAACAAGGCTTCAT
                      ____________________________________________________________
consensus             TGAATAAACTTTGCTTCTCGGAATTGGGAACATCTCTAAAACTCGGCAACAAGGCTTCAT
 
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JMFS105E09+           AGGGAGAAACTCCCGAACTCCCATTCTCCTTTGCATTTACAGCCTGGGGAAGTTTAGTTC
                      ____________________________________________________________
consensus             AGGGAGAAACTCCCGAACTCCCATTCTCCTTTGCATTTACAGCCTGGGGAAGTTTAGTTC
 
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JMFS047C07+                                 GTTGGAATTGACTCCTATTGGACTTGGAGAGAAAGCAG
JMFS105E09+           CATGATTGAGCCCGGGAGCAGAGTTGGAATTGACTCCTATTGGACTTGGAGAGAAAGCAG
                      ____________________________________________________________
consensus             CATGATTGAGCCCGGGAGCAGAGTTGGAATTGACTCCTATTGGACTTGGAGAGAAAGCAG
 
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JMFS047C07+           AGCTTCCGCCATCACGATTTTCCACAGACCTAGATGGCTTCCGAGGGAGCTTATTGAATA
JMFS105E09+           AGCTTCCGCCATCACGATTTTCCACAGACCTAGATGGCTTCCGAGGGAGCTTATTGAATA
                      ____________________________________________________________
consensus             AGCTTCCGCCATCACGATTTTCCACAGACCTAGATGGCTTCCGAGGGAGCTTATTGAATA
 
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JMFS047C07+           TCTGTTTGATCATCACTAGGAACTACACACTCGAGTTTCTTTTGTATGAACCCAACAAGC
JMFS105E09+           TCTGTTTGATCATCACTAGGAACTACACACTCGAGTTTCTTTTGTATGAACCCAACAAGC
JMSF048L07+                                                                  CAAGC
                      ____________________________________________________________
consensus             TCTGTTTGATCATCACTAGGAACTACACACTCGAGTTTCTTTTGTATGAACCCAACAAGC
 
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JMFS047C07+           TAGGTAGATCAAACAGTGTTTCAAAACAGACACATCCCCAAAGATAAACGACACTAGAAA
JMFS105E09+           TAGGTAGATCAAACAGTGTTTCAAAACAGACACATCCCCAAAGATAAACGACACTAGAAA
JMSF048L07+           TAGGTAGATCAAACAGTGTTTCAAAACAGACACATCCCCAAAGATAAACGACACTAGAAA
                      ____________________________________________________________
consensus             TAGGTAGATCAAACAGTGTTTCAAAACAGACACATCCCCAAAGATAAACGACACTAGAAA
 
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JMFS047C07+           CCGAAATCCTAACAGCAACTCAGCAAGATCTCATCAGATCATAAACCTCTGCTGTTCTCC
JMFS105E09+           CCGAAATCCTAACAGCAACTCAGCAAGATCTCATCAGATCATAAACCTCTGCTGTTCTCC
JMSF048L07+           CCGAAATCNTAACAGCAACTCAGCAAGATCTCATCAGATCATAAACNTCTGCTGTTCTCC
                      ____________________________________________________________
consensus             CCGAAATCCTAACAGCAACTCAGCAAGATCTCATCAGATCATAAACCTCTGCTGTTCTCC
 
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JMFS047C07+           ACCACCATAAACCAATCCATCCTTCATATGGTTTCAAGTTCTTCCAGTCTAAGTAAATAA
JMFS105E09+           ACCACCATAAACCAATCCATCCTTCATATGGTTTCAAGTTCTTCCAGTCTAAGTAAATAA
JMSF048L07+           ACCACCATAAACCAATCCATCATTCATATGGTTTCAAGTTCTTCCAGTCTAAGTAAATAA
                      ____________________________________________________________
consensus             ACCACCATAAACCAATCCATCCTTCATATGGTTTCAAGTTCTTCCAGTCTAAGTAAATAA
 
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JMFS047C07+           CTTCCCCTCTCATCTGGGCATTACAAGAAGGTGAGAA                       
JMFS105E09+           CTTCCCCTCTCATCTGGGCATTACAAGAAGGTGAGAACTCCT                  
JMFS023C06+                                                                      A
JMSF048L07+           CTTCCCCTCTCATCTGGGCATTACAAGAAGGTGAGAAACTCCTAAATGAAGAAAATTACA
                      ____________________________________________________________
consensus             CTTCCCCTCTCATCTGGGCATTACAAGAAGGTGAGAACTTCTTAAATGAAGAAAATTACA
 
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JMFS023C06+           ATTATCAGCTGTATCAAAACTCAGATTTNTCAGTTGATCCTACATCAATAAAAGTCAATT
JMSF048L07+           ATTATCAACTGTATCAAAACTCAGATTTTTCAGTTGATCCTACATCAATAAAAGTCAATT
                      ____________________________________________________________
consensus             ATTATCAGCTGTATCAAAACTCAGATTTTTCAGTTGATCCTACATCAATAAAAGTCAATT
 
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JMFS023C06+           TCCCCATTCCCTTTAGTGGAAAAAAATTGACACCAAGTCCATATTTTAGAAATATTTACA
JMSF048L07+           TCCCCATTCCCTTTAGTGGAAAAAAATTGACACCAAGTCCATATTTTAGAAATATTTACA
                      ____________________________________________________________
consensus             TCCCCATTCCCTTTAGTGGAAAAAAATTGACACCAAGTCCATATTTTAGAAATATTTACA
 
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JMFS023C06+           CATATATATCAAATCCCCCTTTATCAGCAGACTTAAAATCATGTTCTTTTTTCTTTTATG
JMSF048L07+           CATATATATCAAATCCCCCTTTATCAGCAGACTTAAAATCATGTTCTTTTTTCTTTTATG
                      ____________________________________________________________
consensus             CATATATATCAAATCCCCCTTTATCAGCAGACTTAAAATCATGTTCTTTTTTCTTTTATG
 
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JMFS023C06+           CCATAAACAGAATAGTCCAAAAGCTCAAATTCCAGTAAAGGTTCAAACCACAATCATGCA
JMSF048L07+           CCATAAACAGAATAGTCCAAAAGCTCAAATTCCAGTAAAGGTTCAAACCACAATCATGCA
                      ____________________________________________________________
consensus             CCATAAACAGAATAGTCCAAAAGCTCAAATTCCAGTAAAGGTTCAAACCACAATCATGCA
 
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JMFS023C06+           ATTTAGGCTCTTCTCACCTGAGAAGAAAAGATGTAAACTAACCGCAGCTCTTCCTTGTGT
JMSF048L07+           ATTTAGGCTCTTCTCACCTGAGAAGAAAAGATGTAAACTAACCGCAGCTCTTCCTTGTGT
                      ____________________________________________________________
consensus             ATTTAGGCTCTTCTCACCTGAGAAGAAAAGATGTAAACTAACCGCAGCTCTTCCTTGTGT
 
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JMFS023C06+           CAAAACTTAGAGAGGTTCACAGCCTACAGCGAGATCAAAAGATTAAAAGATCTGGCCATG
JMSF048L07+           CAAAACTTAGAGAGGTTCACAGCCTACAGCGAGATCAAAAGATTAAAAGATCTGGCCATG
                      ____________________________________________________________
consensus             CAAAACTTAGAGAGGTTCACAGCCTACAGCGAGATCAAAAGATTAAAAGATCTGGCCATG
 
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JMFS023C06+           ATCTACGAAACCCAGATAACATTCCTTATCAAGAATCAC                     
JMSF048L07+           ATCTACGAAACCCAGATAACATTCCTTATCAAGAATCACCTGCAAAAAGCGCCCAAGAAA
                      ____________________________________________________________
consensus             ATCTACGAAACCCAGATAACATTCCTTATCAAGAATCACCTGCAAAAAGCGCCCAAGAAA
 
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JMSF048L07+           TACAAGCATAAGACACTCAATAAACAACAGGAGCAGCACCATTCACCAGAAGGATATTTC
                      ____________________________________________________________
consensus             TACAAGCATAAGACACTCAATAAACAACAGGAGCAGCACCATTCACCAGAAGGATATTTC