| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030H22 | Sequence | 481 | 005288 (6) | ref|XP_009803178.1| | 1e-65 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like | 693 | 005288 (6) | ref|XP_009803181.1| | 1e-76 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like |
| JMSF039A20 | Sequence | 691 | 005288 (6) | ref|XP_009803178.1| | 2e-114 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like | 759 | 005288 (6) | ref|XP_009803178.1| | 7e-90 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like |
| JMSF047M17 | Sequence | 687 | 005288 (6) | ref|XP_009803178.1| | 2e-113 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like | 746 | 005288 (6) | ref|XP_009803181.1| | 8e-74 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like |
This contig is upended
. : . : . : . : . : . :
rJMSF047M17- GTGCAGATCAATGGATAAATATAGCAAAAAT
____________________________________________________________
consensus GTGCAGATCAATGGATAAATATAGCAAAAAT
. : . : . : . : . : . :
rJMFF030H22- CAAGCAAGTTTAACATGGTCAAAGATAATTGCTGTGGCACAACT
rJMSF047M17- AGAACAAACAACGCCACAAGCAAGTTTAACATGGTCAAAGATAATTGCTGTGGCACAACT
rJMSF039A20- CAAGCAAGTTTAACATGGTCAAAGATAATTGCTGTGGCACAACT
____________________________________________________________
consensus AGAACAAACAACGCCACAAGCAAGTTTAACATGGTCAAAGATAATTGCTGTGGCACAACT
. : . : . : . : . : . :
rJMFF030H22- TATCAATGGCATCCCCAAACTTTAAACCATTTTTTTGCGACAATGAACCTCCTAGAAAAC
rJMSF047M17- TATCAATGGCATCCCCAAACTTTAAACCATTTTTTTGCGACAATGAACCTCCTAGAAAAC
rJMSF039A20- TATCAATGGCATCCCCAAACTTTAAACCATTTTTTTGCGACAATGAACCTCCTAGAAAAC
____________________________________________________________
consensus TATCAATGGCATCCCCAAACTTTAAACCATTTTTTTGCGACAATGAACCTCCTAGAAAAC
. : . : . : . : . : . :
rJMFF030H22- TAGGCCTGCCCCATAGCCTACTATATAGAAAATAAGACAATAACTTGAATTCCAAATAAG
rJMSF047M17- TAGGCCTGCCCCATAGCCTACTATATAGAAAATAAGACAATAACTTGAATTCCAAATAAG
rJMSF039A20- TAGGCCTGCCCCATAGCCTACTATATAGAAAATAAGACAATAACTTGAATTCCAAATAAG
____________________________________________________________
consensus TAGGCCTGCCCCATAGCCTACTATATAGAAAATAAGACAATAACTTGAATTCCAAATAAG
. : . : . : . : . : . :
rJMFF030H22- ATGAAACTCGCTTTTTGAGAAATTCCCAGTGTTAGTTGATGAATGCAAAAGGCACTCAAT
rJMSF047M17- ATGAAACTCGCTTTTTGAGAAATTCCCAGTGTTAGTTGATGAATGCAAAAGGCACTCAAT
rJMSF039A20- ATGAAACTCGCTTTTTGAGAAATTCCCAGTGTTAGTTGATGAATGCAAAAGGCACTCAAT
____________________________________________________________
consensus ATGAAACTCGCTTTTTGAGAAATTCCCAGTGTTAGTTGATGAATGCAAAAGGCACTCAAT
. : . : . : . : . : . :
rJMFF030H22- AGCCGTGTCCGAGATGCACCCCAAGAACCAAGTTCCCCTTGACTTCTAGTTTGAACTCTT
rJMSF047M17- AGCCGTGTCCGAGATGCACCCCAAGAACCAAGTTCCCCTTGACTTCTAGTTTGAACTCTT
rJMSF039A20- AGCCGTGTCCGAGATGCACCCCAAGAACCAAGTTCCCCTTGACTTCTAGTTTGAACTCTT
____________________________________________________________
consensus AGCCGTGTCCGAGATGCACCCCAAGAACCAAGTTCCCCTTGACTTCTAGTTTGAACTCTT
. : . : . : . : . : . :
rJMFF030H22- ATCTTTGTCCTCTTGTGCAATAGCATCAGTCACAAGAGACAAAGGTCTTTGATCTATAAC
rJMSF047M17- ATCTTTGTCCTCTTGTGCAATAGCATCAGTCACAAGAGACAAAGGTCTTTGATCTATAAC
rJMSF039A20- ATCTTTGTCCTCTTGTGCAATAGCATCAGTCACAAGAGACAAAGGTCTTTGATCTATAAC
____________________________________________________________
consensus ATCTTTGTCCTCTTGTGCAATAGCATCAGTCACAAGAGACAAAGGTCTTTGATCTATAAC
. : . : . : . : . : . :
rJMFF030H22- TTCATCAATTATCCCAAATTCTTTTGCCTCCTCAGGGGTCATGAAATAATCTCTATCCAT
rJMSF047M17- TTCATCAATTATCCCAAATTCTTTTGCCTCCTCAGGGGTCATGAAATAATCTCTATCCAT
rJMSF039A20- TTCATCAATTATCCCAAATTCTTTTGCCTCCTCAGGGGTCATGAAATAATCTCTATCCAT
JMSF039A20+ TCCTCAGGGGTCATGAAATAATCTCTATCCAT
JMSF047M17+ AGGGGTCATGAAATAATCTCTATCCAT
____________________________________________________________
consensus TTCATCAATTATCCCAAATTCTTTTGCCTCCTCAGGGGTCATGAAATAATCTCTATCCAT
. : . : . : . : . : . :
rJMFF030H22- ATTTTTCTGAATTATATCTACTGATTGACCGGTATGTTTTGAGTATAATTCATTTAGAGC
rJMSF047M17- ATTTTTCTGAATTATATCTACTGATTGCCCGGTATGTTTTGAGTATAATTCATTTAGAGC
rJMSF039A20- ATTTTTCTGAATTATATCTACTGATTGCCCGGTATGTTTTGAGTATAATTCATTTAGAGC
JMSF039A20+ ATTTTTCTGAATTATATCTACTGATTGCCCGGTATGTTTTGAGTATAATTCATTTAGAGC
JMSF047M17+ ATTTTTCTGAATTATATCTACTGATTGCCCGGTATGTTTTGAGTATAATTCATTTAGAGC
____________________________________________________________
consensus ATTTTTCTGAATTATATCTACTGATTGCCCGGTATGTTTTGAGTATAATTCATTTAGAGC
. : . : . : . : . : . :
rJMFF030H22- ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
rJMSF047M17- ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
rJMSF039A20- ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
JMSF039A20+ ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
JMSF047M17+ ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
____________________________________________________________
consensus ATCCCAAACCCGAACAATTTGTTTTGTGTGAATTGTCATATCTTTAGCCTGTCCACTGTA
. : . : . : . : . : . :
rJMFF030H22- TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
rJMSF047M17- TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
rJMSF039A20- TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
JMSF039A20+ TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
JMFF030H22+ CTT
JMSF047M17+ TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
____________________________________________________________
consensus TCCACCAGAAGGCTGATGAATCATAATTGTTGCATTAGGGAGAGAACGTCTCTGACCCTT
. : . : . : . : . : . :
rJMFF030H22- GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTANGCATATGGTGTT
rJMSF047M17- GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
rJMSF039A20- GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
JMSF039A20+ GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
JMFF030H22+ GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
JMSF047M17+ GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
____________________________________________________________
consensus GGCTCCAGCAGCTAGAAGTAGAGATCCCATTGATGCTGCCTGACCTAGGCATATGGTGTT
. : . : . : . : . : . :
rJMFF030H22- GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGA
rJMSF047M17- GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACA
rJMSF039A20- GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACAGCGCC
JMSF039A20+ GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACAGCGCC
JMFF030H22+ GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACAGCGCC
JMSF047M17+ GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACAGCGCC
____________________________________________________________
consensus GATGGGAGATCGAATGTACTGCATAGTATCATATATAGCAAGACCGGCGGTGACAGCGCC
. : . : . : . : . : . :
rJMSF039A20- GCCAGGAGAATTGAGGTACATATGGATGGGCTTGGAGGGGTTCTCGGACTCGAGA
JMSF039A20+ GCCAGGAGAATTGAGGTACATATGGATGGGCTTGGAGGGGTTCTCGGACTCGAGAAAGAG
JMFF030H22+ GCCAGGAGAATTGAGGTACATATGGATGGGCTTGGAGGGGTTCTCGGACTCGAGAAAGAG
JMSF047M17+ GCCAGGAGAATTGAGGTACATATGGATGGGCTTGGAGGGGTTCTCGGACTCGAGAAAGAG
____________________________________________________________
consensus GCCAGGAGAATTGAGGTACATATGGATGGGCTTGGAGGGGTTCTCGGACTCGAGAAAGAG
. : . : . : . : . : . :
JMSF039A20+ GAGCTGAGCGACAACGACGTGGGACGTGTCGTCATTGATGGGACCATTGATGCAGATTAT
JMFF030H22+ GAGCTGAGCGACAACGACGTGGGACGTGTCGTCATTGATGGGACCATTGATGCAGATTAT
JMSF047M17+ GAGCTGAGCGACAACGACGTGGGACGTGTCGTCATTGATGGGACCATTGATGCAGATTAT
____________________________________________________________
consensus GAGCTGAGCGACAACGACGTGGGACGTGTCGTCATTGATGGGACCATTGATGCAGATTAT
. : . : . : . : . : . :
JMSF039A20+ GCGCTCCTTGAGAAGCCTCGAGAATATGTCGTAGGCTCTCTCCCCTCGAGAGGAGTGCTC
JMFF030H22+ GCGCTCCTTGAGAAGCCTCGAGAATATGTCGTAGGCTCTCTCCCCTCGAGAGGAGTGCTC
JMSF047M17+ GCGCTCCTTGAGAAGCCTCGAGAATATGTCGTAGGCTCTCTCCCCTCGAGAGGAGTGCTC
____________________________________________________________
consensus GCGCTCCTTGAGAAGCCTCGAGAATATGTCGTAGGCTCTCTCCCCTCGAGAGGAGTGCTC
. : . : . : . : . : . :
JMSF039A20+ TATTACCATCGGAACCAGTCCATACCACCGCCGAGAACTGTAACGCGCCTGAATTTGGCC
JMFF030H22+ TATTACCATCGGAACCAGTCCATACCACCGCCGAGAACTGTAACGCGCCTGAATTTGGCC
JMSF047M17+ TATTACCATCGGAACCAGTCCATACCACCGCCGAGAACTGTAACGCGCCTGAATTTGGCC
____________________________________________________________
consensus TATTACCATCGGAACCAGTCCATACCACCGCCGAGAACTGTAACGCGCCTGAATTTGGCC
. : . : . : . : . : . :
JMSF039A20+ GCAAAGCGGTGGAGCTCTCAGAGAGGCAGCGGCAGAGAGCCCATTCCAGAGCTTGCGCGT
JMFF030H22+ GCAAAGCGGTGGAGCTCTCAGAGAGGCAGCGGCAGAGAGCCCATTCCAGAGCTTGCGCGT
JMSF047M17+ GCAAAGCGGTGGAGCTCTCAGAGAGGCAGCGGCAGAGAGCCCATTCCAGAGCTTGCGCGT
____________________________________________________________
consensus GCAAAGCGGTGGAGCTCTCAGAGAGGCAGCGGCAGAGAGCCCATTCCAGAGCTTGCGCGT
. : . : . : . : . : . :
JMSF039A20+ AATGAGGCAGCGCATGGTGGTGAAGAAAATGAAAGAGCAAAGAGGGAGATTAGCCGAT
JMFF030H22+ AATGAGGCAGCGCATGGTGGTGAAGAAAATGAAAGAGCAAAGAGGGAGATTAGCCGAT
JMSF047M17+ AATGAGGCAGCGCATGGTGGTGAAGAAAATGAAAGAGCAAAGAGGGAGATTAGCCGATCC
____________________________________________________________
consensus AATGAGGCAGCGCATGGTGGTGAAGAAAATGAAAGAGCAAAGAGGGAGATTAGCCGATCC