| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF049B07 | Sequence | 634 | 005287 (5) | ref|XP_009769784.1| | 4e-62 | PREDICTED: exocyst complex component EXO84B [Nicotiana sylvestris] | 388 | 002721 (3) | |||
| JMFF049D07 | Sequence | 627 | 005287 (5) | gb|EYU21227.1| | 1e-60 | hypothetical protein MIMGU_mgv1a001664mg [Erythranthe guttata] | 411 | 002721 (3) | |||
| JMFS036C09 | Sequence | 612 | 005287 (5) | ref|XP_009622289.1| | 1e-43 | PREDICTED: exocyst complex component EXO84B [Nicotiana tomentosiformis] | |||||
| JMSF024I20 | Sequence | 684 | 005287 (5) | ref|XP_009622289.1| | 9e-70 | PREDICTED: exocyst complex component EXO84B [Nicotiana tomentosiformis] | 748 | 002721 (3) | ref|XP_006342868.1| | 256 | PREDICTED: uncharacterized protein LOC102578846 [Solanum tuberosum] |
| JMSF047K12 | Sequence | 670 | 005287 (5) | ref|XP_009622289.1| | 9e-51 | PREDICTED: exocyst complex component EXO84B [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF024I20+ GAAACTC
____________________________________________________________
consensus GAAACTC
. : . : . : . : . : . :
JMSF024I20+ AGTTTACCAGTTCTCTATATCTGAAGGTTCACTTATTTCACCATNGGAACTGCTATTGGT
____________________________________________________________
consensus AGTTTACCAGTTCTCTATATCTGAAGGTTCACTTATTTCACCATNGGAACTGCTATTGGT
. : . : . : . : . : . :
JMSF024I20+ GGCAGAATCAGGAAGAGAATCAGATAAAGAATCAATATGAACACCTTCAGCTAAACTATG
JMFF049B07+ GCAGAATCAGGAAGAGAATCAGATAAAGAATCAATATGAACACCTTCAGCTAAACTATG
JMFF049D07+ TCAGATAAAGAATCAATATGAACACCTTCAGCTAAACTATG
JMSF047K12+ CTAAACTATG
____________________________________________________________
consensus GGCAGAATCAGGAAGAGAATCAGATAAAGAATCAATATGAACACCTTCAGCTAAACTATG
. : . : . : . : . : . :
JMSF024I20+ GACTAAAGTGGCCTGAGTGGATAACAAGCTTCTAATCGATGAAAGCTCACCCTCCAAATC
JMFF049B07+ GACTAAAGTGGCCTGAGTGGATAACAAGCTTCTAATCGATGAAAGCTCACCCTCCAAATC
JMFF049D07+ GACTAAAGTGGCCTGAGTGGATAACAAGCTTCTAATCGATGAAAGCTCACCCTCCAAATC
JMFS036C09+ AATCGATGAAAGCTCACCCTCCAAATC
JMSF047K12+ GACTAAAGTGGCCTGAGTGGATACCAAGCTTCTAATCGATGAAAGCTCACCCTCCAAATC
____________________________________________________________
consensus GACTAAAGTGGCCTGAGTGGATAACAAGCTTCTAATCGATGAAAGCTCACCCTCCAAATC
. : . : . : . : . : . :
JMSF024I20+ CGAAATTTCTTTTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
JMFF049B07+ CGAAATTTCTTTTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
JMFF049D07+ CGAAATTTCTTNTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
JMFS036C09+ CGAAATTTCTTTTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
JMSF047K12+ CGAAATTTCTTTTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
____________________________________________________________
consensus CGAAATTTCTTTTGATGTCCGAATGAAAGCAGTGTAGTTAGCATAGACACTTCGGTGCAA
. : . : . : . : . : . :
JMSF024I20+ CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
JMFF049B07+ CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
JMFF049D07+ CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
JMFS036C09+ CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
JMSF047K12+ CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
____________________________________________________________
consensus CTCCTCAGCAGAGGCTTTTTTCAGATCCATAAGATTCGAACATAATTGCCTAATCTCCTT
. : . : . : . : . : . :
JMSF024I20+ TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
JMFF049B07+ TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
JMFF049D07+ TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
JMFS036C09+ TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
JMSF047K12+ TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
____________________________________________________________
consensus TTCATTCAACGAGTGACACTTGGACTGCACATAAACATCGGCGTCGAAACTATCGGATTT
. : . : . : . : . : . :
JMSF024I20+ GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
JMFF049B07+ GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
JMFF049D07+ GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
JMFS036C09+ GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
JMSF047K12+ GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
____________________________________________________________
consensus GAAGATGTTGAGATTCTCCTCGAGGTTGGTTCCAGCATCCCTACTGCTCCCTTTTGCCGG
. : . : . : . : . : . :
JMSF024I20+ CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
JMFF049B07+ CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
JMFF049D07+ CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
JMFS036C09+ CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
JMSF047K12+ CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
____________________________________________________________
consensus CATCCCCGACGCGTGTGTCCTTGACCGAGAAGACTTCAAGGTGGTGTTAGCCATGAACGC
. : . : . : . : . : . :
JMSF024I20+ CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
JMFF049B07+ CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
JMFF049D07+ CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
JMFS036C09+ CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
JMSF047K12+ CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
____________________________________________________________
consensus CAAATCAGTGAATCGGCAACTGATTTGCTAATGCGGCGAAGTACTAGGGCTGAATGCGCG
. : . : . : . : . : . :
JMSF024I20+ ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
JMFF049B07+ ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
JMFF049D07+ ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
JMFS036C09+ ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
JMSF047K12+ ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
____________________________________________________________
consensus ATTGACGACGACAGAATGCTGCTGCAATCGAATGGGTTAGATCTGCGGCGCGAGAGGAGG
. : . : . : . : . : . :
JMSF024I20+ CTGCGGAGGTGAGACTGAGAGAGGAATTGCAGCCATTAATGATTGGAGCAGGAGAAGAAG
JMFF049B07+ CTGCGGAGGTGAGACTGAGAGAGGAATTGCAGCCATTAATGATTGGAGCAGGAGAAGAAG
JMFF049D07+ CTGCGGAGGTGAGACTGAGAGAGGAATTGCAGCCATTAATGATTGGAGCAGGAGAAGAAG
JMFS036C09+ CTGCGGAGGTGAGACTGAGAGAGGAATTGCAGCCATTAATGATTGGAGCAGGAGAAGAAG
JMSF047K12+ CTGCGGAGGTGAGACTGAGAGAGGAATTGCANCCATTAATGATTGGAGCAGGAGAAGAAG
____________________________________________________________
consensus CTGCGGAGGTGAGACTGAGAGAGGAATTGCAGCCATTAATGATTGGAGCAGGAGAAGAAG
. : . : . : . : . : . :
JMSF024I20+ AAAGGTAGACGATCCC
JMFF049B07+ AAAGGTAGACGATCCCGAATTAGT
JMFF049D07+ AAAGGTAGACGATCCCGAATTAGT
JMFS036C09+ AAAGGTAGACGATCCCGAATTAGTTGGCGGGTTGATTGAACAAACAAATATACAGATATA
JMSF047K12+ AAAGGTAGACGATCCCGAATTAGTTGGCGGGTTGATTGAACAAACAAATATACAGATATA
____________________________________________________________
consensus AAAGGTAGACGATCCCGAATTAGTTGGCGGGTTGATTGAACAAACAAATATACAGATATA
. : . : . : . : . : . :
JMFS036C09+ GAGATAGAGAGAGAGAGAGAGGGAAAGAGAGTGGGGTTGTTGGGT
JMSF047K12+ GAGATAGAGAGAGAGAGAGAGGGAAAGAGAGTGGGGTTGTTGGGTTGGCCAACCCAGCTC
____________________________________________________________
consensus GAGATAGAGAGAGAGAGAGAGGGAAAGAGAGTGGGGTTGTTGGGTTGGCCAACCCAGCTC