Contig 005284:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048J01+                           GCTAATTGTGTTAAGCCATATACTGGTCCAGGTCCAGCAGGTTG
                      ____________________________________________________________
consensus                             GCTAATTGTGTTAAGCCATATACTGGTCCAGGTCCAGCAGGTTG
 
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JMSF048J01+           GGTACTTGGGGAGGCAACGGGATTAACAGGTCCCGGGTATGGGGTCCAACCCCCTGGAAC
                      ____________________________________________________________
consensus             GGTACTTGGGGAGGCAACGGGATTAACAGGTCCCGGGTATGGGGTCCAACCCCCTGGAAC
 
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JMSF048J01+           TGCAACCATCCCGGGGGGAATCAGCATAGGACTATATGTTCCCGGGATATATGACCCGGG
                      ____________________________________________________________
consensus             TGCAACCATCCCGGGGGGAATCAGCATAGGACTATATGTTCCCGGGATATATGACCCGGG
 
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JMSF048J01+           GGGAAGCAGCCCAGGCCTTGAAATCGGCCAGTTGCCAGGCATTACACCGTACTGCTGAGA
                      ____________________________________________________________
consensus             GGGAAGCAGCCCAGGCCTTGAAATCGGCCAGTTGCCAGGCATTACACCGTACTGCTGAGA
 
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JMSF048J01+           GGATTGAACAGAGGGAGACTGCACGGTTGGAAAAATCCCAGGTGCAGCAACAGGTGTTGG
                      ____________________________________________________________
consensus             GGATTGAACAGAGGGAGACTGCACGGTTGGAAAAATCCCAGGTGCAGCAACAGGTGTTGG
 
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JMSF048J01+           TGGAAGCAAAGGTCCCGGTCCAGCAGTTGGTAATGGCATTTGTTCACCAACCGGTGGAGG
                      ____________________________________________________________
consensus             TGGAAGCAAAGGTCCCGGTCCAGCAGTTGGTAATGGCATTTGTTCACCAACCGGTGGAGG
 
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JMSF048J01+           ATGATGAAATTTACAGGTGACCCCAAACTTGCAATGCCCTGTTTTTACATAGTATGAACA
JMSF014C16+                                                       TTACATAGTATGAACA
                      ____________________________________________________________
consensus             ATGATGAAATTTACAGGTGACCCCAAACTTGCAATGCCCTGTTTTTACATAGTATGAACA
 
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JMSF048J01+           TTCCTTTTCACCCGGCCGCAATGGGTATCCATAAACATTCAATGCCACCGGGGCTTGAGA
JMSF014C16+           TTCCTTTTCACCCGGACGTAATGGGCATCCATAAATATTCAGAGCTACTGGAGCAGGAGA
                      ____________________________________________________________
consensus             TTCCTTTTCACCCGGCCGTAATGGGTATCCATAAATATTCAGTGCTACTGGGGCTTGAGA
 
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JMSF048J01+           TCCACCTCCCTGTCTTGGGTGGTGATACTTGCAAGAAGCACCAAATTTACACGTCCCCGT
JMSF014C16+           TCCACCTCCCTGTCTTGGATGGTGATACTTGCAAGAAGCACCAAATTTACACATTCCCGT
JMSF046L24+                                         GCAAGAAGCACCAAATTTACACATTCCCGT
                      ____________________________________________________________
consensus             TCCACCTCCCTGTCTTGGGTGGTGATACTTGCAAGAAGCACCAAATTTACACATTCCCGT
 
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JMSF048J01+           CCTCATATAGTACTGGCAAACAGGTTGACCCACTCTTTCTGGGTACTCCCCTCCAGTAGG
JMSF014C16+           CCTCATATAGTACTGGCAAACTGGTTGACCCACTCTTTCTGGGTACTCTGCCCCACTAGA
JMSF046L24+           CCTCATATAGTACTGGCAAACTGGTTGACCCACTCTTTNTGGGTANTNTGCCCCACTAGA
                      ____________________________________________________________
consensus             CCTCATATAGTACTGGCAAACTGGTTGACCCACTCTTTCTGGGTACTCTGCCCCACTAGA
 
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JMSF048J01+           CCTCATAGCTCTCACAG                                           
JMSF014C16+           CCTCATAGCTCCCACAGTCAAACTACGGTCTCGGGGATGGTTGAACCGACAGCGATCGCC
JMSF046L24+           CCTCATAGNTCCCACAGTCAAANTACGGTCTCGGGGATGGTTGAACCGACAGCGATCGCC
                      ____________________________________________________________
consensus             CCTCATAGCTCCCACAGTCAAACTACGGTCTCGGGGATGGTTGAACCGACAGCGATCGCC
 
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JMSF014C16+           ATAGCCACAGAAACCTGTCCTCAAGTAATAAATACAATCGGCCTCGTTGGGGCGTTCCGG
JMSF046L24+           ATAGCCACAGAAACCTGTCCTCAAGTAATAAATACAATCGGCCTCGTTGGGGCGTTCCGG
                      ____________________________________________________________
consensus             ATAGCCACAGAAACCTGTCCTCAAGTAATAAATACAATCGGCCTCGTTGGGGCGTTCCGG
 
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JMSF014C16+           GTAGGATTCGGACCCACCGCCGAGTGTCAACTGCCACATAGGCTCTTCGAGCCCCGTCTC
JMSF046L24+           GTAGGATTCGGACCCACCGCCGAGTGTCAANTGCCACATAGGCTCTTCGAGCCCCGTCTC
                      ____________________________________________________________
consensus             GTAGGATTCGGACCCACCGCCGAGTGTCAACTGCCACATAGGCTCTTCGAGCCCCGTCTC
 
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JMSF014C16+           GCCGCCCGGCGCCATCCACTCCGCCACCGGATCCACCGATGTCCCCTCCATTGCTTGGGT
JMSF046L24+           GCCGCCCGGCGCCATCCACTCCGCCACCGGATCCACCGATGTCCCCTCCATTGCTTGGGT
                      ____________________________________________________________
consensus             GCCGCCCGGCGCCATCCACTCCGCCACCGGATCCACCGATGTCCCCTCCATTGCTTGGGT
 
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JMSF014C16+           CCCACTAGACCTCTCCAT                                          
JMSF046L24+           CCCACTAGACCTCTCCATTCTCCTCCCACTCCTCCCTCCCTCTCTCTCTTTCTCTCTCTA
                      ____________________________________________________________
consensus             CCCACTAGACCTCTCCATTCTCCTCCCACTCCTCCCTCCCTCTCTCTCTTTCTCTCTCTA
 
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JMSF046L24+           TAAATATATATATATACCAACACCTATGCACAATACAGAACGAACGAAAGAGAGAGAGAG
                      ____________________________________________________________
consensus             TAAATATATATATATACCAACACCTATGCACAATACAGAACGAACGAAAGAGAGAGAGAG
 
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JMSF046L24+           AGAGAGAGAGAGCGAACGAGAGATGTATATATGTACGGATTATATATCTTGTATACGTAT
                      ____________________________________________________________
consensus             AGAGAGAGAGAGCGAACGAGAGATGTATATATGTACGGATTATATATCTTGTATACGTAT
 
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JMSF046L24+           CTACAGACAGTGTGTGTGCGAGACAGAGAGAGTGTGTGTGCGTGGGGGATGGTGTTTGTC
                      ____________________________________________________________
consensus             CTACAGACAGTGTGTGTGCGAGACAGAGAGAGTGTGTGTGCGTGGGGGATGGTGTTTGTC