| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002O17 | Sequence | 214 | 005280 (5) | 713 | 014059 (7) | ref|XP_009802392.1| | 6e-114 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri | |||
| JMSF020K14 | Sequence | 562 | 005280 (5) | ref|XP_010319211.1| | 1e-24 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Solanum lycopersicu | 617 | 014059 (7) | ref|XP_009802396.1| | 9e-80 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
| JMSF029L02 | Sequence | 614 | 005280 (5) | ref|XP_011095865.1| | 134 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 632 | 014059 (7) | ref|XP_009802396.1| | 5e-85 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
| JMSF039L05 | Sequence | 633 | 005280 (5) | ref|XP_011095865.1| | 144 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 898 | 014059 (7) | ref|XP_009802396.1| | 4e-141 | PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Nicotiana sylvestri |
| JMSF046F19 | Sequence | 131 | 005280 (5) | ||||||||
This contig is upended
. : . : . : . : . : . :
JMSF029L02+ CCTGACGCCCCTCAAGAGT
JMSF039L05+ ACTAAAACATTTTCATTCTCCTGACGCCCCTCAAGAGT
____________________________________________________________
consensus ACTAAAACATTTTCATTCTCCTGACGCCCCTCAAGAGT
. : . : . : . : . : . :
JMSF029L02+ TACTTGCCTTATGGGATNNTCAACATTTCCTTTTTCAGATCNCCGGGTAGATGTGTTGGC
JMSF039L05+ TACTTGCCTTATGGGATTTTCAACATTTCCTTTTTCAGATCCCCGGGTAGATGTGTTGGC
____________________________________________________________
consensus TACTTGCCTTATGGGATTTTCAACATTTCCTTTTTCAGATCCCCGGGTAGATGTGTTGGC
. : . : . : . : . : . :
JMSF029L02+ TGTTTCATTTTCTAGTAAATCTTCAGCAAGCTGTCTGGCTTTACGAGCATTTTCATTGCT
JMSF039L05+ TGTTTCATTTTCTAGTAAATCTTCAGCAAGCTGTCTGGCTTTACGAGCATTTTCATTGCT
JMSF020K14+ CATTTTCTAGTAAATCTTCAGCAAGCNGTCTGGCTTTACGAGCATNTTCATTGCT
____________________________________________________________
consensus TGTTTCATTTTCTAGTAAATCTTCAGCAAGCTGTCTGGCTTTACGAGCATTTTCATTGCT
. : . : . : . : . : . :
JMSF029L02+ TTTACCATNTGAGCCATTCAAAAGGGATAGGCTTGAATTTTCTGAATACACAATACCTAA
JMSF039L05+ TTTACCATCTGAGCCATTCAAAAGGGATAGGCTTGAATTTTCTGAATACACAATACCTAA
JMSF020K14+ TTTACCATNTGAGCCATTCAAAAGGGATAGGCNNGAATTTTNTGAATACACANTACCTAA
____________________________________________________________
consensus TTTACCATCTGAGCCATTCAAAAGGGATAGGCTTGAATTTTCTGAATACACAATACCTAA
. : . : . : . : . : . :
JMSF029L02+ TGGTTCTTTCAGAATAGTATCAGACTCCTGAGGCAGCACATTTAAAGGTCTGATTTCACC
JMSF039L05+ TGGTTCTTTCAGAATAGTATCAGACTCCTGAGGCAGCACATTTAAAGGTCTGATTTCACC
JMSF020K14+ TGGTTCTTTCAGAATAGTATCNGACTCCNGAGGCAGCACANNTAAAGGTCTGATTTCNCC
____________________________________________________________
consensus TGGTTCTTTCAGAATAGTATCAGACTCCTGAGGCAGCACATTTAAAGGTCTGATTTCACC
. : . : . : . : . : . :
JMSF029L02+ ACCCAATGTAAAAGTGGAGACTTCTTCAACGAATTCATTTCTAGAAGAAGAGGAAGCGAA
JMSF039L05+ ACCCAATGTAAAAGTGGAGACTTCTTCAACGAATTCATTTCTAGAAGAAGAGGAAGCGAA
JMSF020K14+ NCCCAATGTAAAAGTGGAGANTTNTTCAANGAATTCATTTCTAGAAGAAGAGGAAGCGAA
____________________________________________________________
consensus ACCCAATGTAAAAGTGGAGACTTCTTCAACGAATTCATTTCTAGAAGAAGAGGAAGCGAA
. : . : . : . : . : . :
JMSF029L02+ ATAAGTGGCGAGAGTGTGAGTATAGAGAACGATTGGGGAAAGAACCGTCACCAGAAGCAA
JMSF039L05+ ATAAGTGGCGAGAGTGTGAGTATAGAGAACGATTGGGGAAAGAACCGTCACCAGAAGCAA
JMSF020K14+ ATAAGTGGCGAGAGTGTGAGTATAGAGANCGATTGGGGAAAGAACCGTCACCNGAAGCAA
____________________________________________________________
consensus ATAAGTGGCGAGAGTGTGAGTATAGAGAACGATTGGGGAAAGAACCGTCACCAGAAGCAA
. : . : . : . : . : . :
JMSF029L02+ GAACAGCACCGGCTTCCTTAGTCTCATCTTTCTCCTTCCCCTCAACCACTAAAGCTTAAA
JMSF039L05+ GAACAGCACCGGCTTCCTTAGTCTCATCTTTCTCCTTCCCCTCAACCACTAAAGCTTAAA
JMSF020K14+ GAACAGCNCCGGCTTCCTTAGTNTCATCTTTCTCNTTCCCCTCANCCACTAAAGCNTAAA
____________________________________________________________
consensus GAACAGCACCGGCTTCCTTAGTCTCATCTTTCTCCTTCCCCTCAACCACTAAAGCTTAAA
. : . : . : . : . : . :
JMSF029L02+ GCTTTTTTAACCTTTTCTCCGATCTCCTTCCACACTGAAGATTAGTAGTCAGTTCCAACC
JMSF039L05+ GCTTTTTTAACCTTTTCTCCGATCTCCTTCCACACTGAAGATTAGTAGTCAGTTCCAACC
JMSF020K14+ GCTTTTTTAACCTTTTNTCCGATCTCCTTCCACACNGAAGATTAGTAGTCAGTTCCANCC
JMSF002O17+ TCCACACTGAAGATTAGTAGTCAGTTCCAACC
____________________________________________________________
consensus GCTTTTTTAACCTTTTCTCCGATCTCCTTCCACACTGAAGATTAGTAGTCAGTTCCAACC
. : . : . : . : . : . :
JMSF029L02+ CAAGTACTGAATATTATTCATGGAAAATGAAGGCAGCTCAGCTAGCTAGCTAGCTCAAAG
JMSF039L05+ CAAGTACTGAATATTATTCATGGAAAATGAAGGCAGCTCAGCTAGCTAGCTAGCTCAAAG
JMSF020K14+ CAAGTACTGAATATTATTCANGGAAAATGAAGGCAGCTCAGCTAGCTAGCTAGCTCAAAG
JMSF002O17+ CANGTANTGAATATTATTCATGGAAAATGAAGGCAGCTCNGCTAGCTAGCTAGCTCAAAG
____________________________________________________________
consensus CAAGTACTGAATATTATTCATGGAAAATGAAGGCAGCTCAGCTAGCTAGCTAGCTCAAAG
. : . : . : . : . : . :
JMSF029L02+ ACCACCAGGAAAATGGGTCGCCCCAGCCGCCGGAAAACCTGTTTCTTAAGATAC
JMSF039L05+ ACCACCAGGAAAATGGGTCGCCCCAGCCGCCGGAAAACCTGTTTCTTAAGATAC
JMSF020K14+ ACCNCCAGGAAAATGGGTCGCCCCANCCGCCGGAAAACCTGTTTNTTAAGATACAGGGAG
JMSF002O17+ ACCNCCAGGAAAATGGGTCGCCCCNNCCGCCGGAAAACCTGTTTNTTAAGATACANGGAG
JMSF046F19+ GATACANGGAG
____________________________________________________________
consensus ACCACCAGGAAAATGGGTCGCCCCAGCCGCCGGAAAACCTGTTTCTTAAGATACAGGGAG
. : . : . : . : . : . :
JMSF020K14+ AGAGAGAGAGAGAGAGAGAGAGAGAG
JMSF002O17+ AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGGTGTGTCGGCAAGCTGTATTA
JMSF046F19+ AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGGTGTGTCGGCAAGCTGTATTANGA
____________________________________________________________
consensus AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGGTGTGTCGGCAAGCTGTATTANGA
. : . : . : . : . : . :
JMSF046F19+ TGAAAAATTAAGAAAATGGTTTCAAAAAAAGTTAAGGATGTGGGGTTGGAAGATGCAATC
____________________________________________________________
consensus TGAAAAATTAAGAAAATGGTTTCAAAAAAAGTTAAGGATGTGGGGTTGGAAGATGCAATC