Contig 005279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010D13Sequence538005279 (3)ref|XP_007156753.1|4e-10hypothetical protein PHAVU_002G014500g [Phaseolus vulgaris] gb|ESW28747.1| hypot
JMSF046B11Sequence619005279 (3)ref|XP_007156753.1|5e-10hypothetical protein PHAVU_002G014500g [Phaseolus vulgaris] gb|ESW28747.1| hypot569005279 (3)ref|XP_007156753.1|4e-10hypothetical protein PHAVU_002G014500g [Phaseolus vulgaris] gb|ESW28747.1| hypot

Alignment

This contig is upended


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JMSF046B11+                                                    TTTGAAGAAGCTTTCAAGG
                      ____________________________________________________________
consensus                                                      TTTGAAGAAGCTTTCAAGG
 
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rJMSF046B11-                                         TCGTACAATAAATCTTGTCGGAAGAATGT
JMFN010D13+                            GGGTAGTATTTTATTCGTACAATAAATCTTGTCGGAAGAATGT
JMSF046B11+           AGCAGAGGAATATTTTTGGGTAGTATTTTATTCGTACAATAAATCTTGTCGGAAGAATGT
                      ____________________________________________________________
consensus             AGCAGAGGAATATTTTTGGGTAGTATTTTATTCGTACAATAAATCTTGTCGGAAGAATGT
 
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rJMSF046B11-          CAACTAAAAATACAGAAGGAGGAATCCCAACAACATACAGCAAATGATTCCACATATCAT
JMFN010D13+           CAACTAAAAATACAGAAGGAGGAATCCCAACAACATACAGCAAATGATTCCACATATCAT
JMSF046B11+           CAACTAAAAATACAGAAGGAGGAATCCCAACAACATACAGCAAATGATTCCACATATCAT
                      ____________________________________________________________
consensus             CAACTAAAAATACAGAAGGAGGAATCCCAACAACATACAGCAAATGATTCCACATATCAT
 
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rJMSF046B11-          CATCCAATATAAGTGAATACCAAAAAAGGAACTAAAGCTTACAGTTTTGCTAAACCAGGA
JMFN010D13+           CATCCAATATAAGTGAATACCAAAAAAGGAACTAAAGCTTACAGTTTTGCTAAACCAGGA
JMSF046B11+           CATCCAATATAAGTGAATACCAAAAAAGGAACTAAAGCTTACAGTTTTGCTAAACCAGGA
                      ____________________________________________________________
consensus             CATCCAATATAAGTGAATACCAAAAAAGGAACTAAAGCTTACAGTTTTGCTAAACCAGGA
 
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rJMSF046B11-          CAAAATGGTATATTATCTTCCACTGTTTGACTGCTTCTTTACTGCAACGTTTGCTTGCTA
JMFN010D13+           CAAAATGGTATATTATCTTCCACTGTTTGACTGCTTCTTTACTGCAACGTTTGCTTGCTA
JMSF046B11+           CAAAATGGTATATTATCTTCCACTGTTTGACTGCTTCTTTACTGCAACGTTTGCTTGCTA
                      ____________________________________________________________
consensus             CAAAATGGTATATTATCTTCCACTGTTTGACTGCTTCTTTACTGCAACGTTTGCTTGCTA
 
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rJMSF046B11-          ACATCTACTGCTATAAATTTCAAGTACCCTGAGACAATTCGCAGCAAGAGCGCGCCTCCA
JMFN010D13+           ACATCTACTGCTATAAATTTCAAGTACCCTGAGACAATTCGCAGCAAGAGCGCGCCTCCA
JMSF046B11+           ACATCTACTGCTATAAATTTCAAGTACCCTGAGACAATTCGCAGCAAGAGCGCGCCTCCA
                      ____________________________________________________________
consensus             ACATCTACTGCTATAAATTTCAAGTACCCTGAGACAATTCGCAGCAAGAGCGCGCCTCCA
 
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rJMSF046B11-          CTTCGATGTGCGAAGTCAAGCGAGCCGCCGCCAGCGCGCTGTGCAGCGGCAGTAGCGATT
JMFN010D13+           CTTCGATGTGCGAAGTCAAGCGAGCCGCCGCCAGCGCGCTGTGCAGCGGCAGTAGCGATT
JMSF046B11+           CTTCGATGTGCGAAGTCAAGCGAGCCGCCGCCAGCGCGCTGTGCAGCGGCAGTAGCGATT
                      ____________________________________________________________
consensus             CTTCGATGTGCGAAGTCAAGCGAGCCGCCGCCAGCGCGCTGTGCAGCGGCAGTAGCGATT
 
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rJMSF046B11-          GAGTACAACCTAATATTCCATTAGTCCTGGGTAGAATGCCGGAAAGAAGACGGCGAGATT
JMFN010D13+           GAGTACAACCTAATATTCCATTAGTCCTGGGTAGAATGCCGGAAAGAAGACGGCGAGATT
JMSF046B11+           GAGTACAACCTAATATTCCATTAGTCCTGGGTAGAATGCCGGAAAGAAGACGGCGAGATT
                      ____________________________________________________________
consensus             GAGTACAACCTAATATTCCATTAGTCCTGGGTAGAATGCCGGAAAGAAGACGGCGAGATT
 
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rJMSF046B11-          GAAGGCGCTGGCCGAGAAGCGTTGGTGAGCGGAGGAGGGAAATGGATGGCGTCGACCGGA
JMFN010D13+           GAAGGCGCTGGCCGAGAAGCGTTGGTGAGCGGAGGAGGGAAATGGATGGCGTCGACCGGA
JMSF046B11+           GAAGGCGCTGGCCGAGAAGCGTTGGTGAGCGGAGGAGGGAAATGGATGGCGTCGACCGGA
                      ____________________________________________________________
consensus             GAAGGCGCTGGCCGAGAAGCGTTGGTGAGCGGAGGAGGGAAATGGATGGCGTCGACCGGA
 
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rJMSF046B11-          GACTAGCCGTCCTTGCTGTAGACAGAAGAGCCCGGGAGAGCGATCCGTAGCGCCCAGCCA
JMFN010D13+           GACTAGCCGTCCTTGCTGTAGACAGAAGAGCCCGGGAGAGCGATCCGTAGCGCCCAGCCA
JMSF046B11+           GACTAGCCGTCCTTGCTGTAGACAGAAGAGCCCGGGAGAGCGATCCGTAGCGCCCAGCCA
                      ____________________________________________________________
consensus             GACTAGCCGTCCTTGCTGTAGACAGAAGAGCCCGGGAGAGCGATCCGTAGCGCCCAGCCA
 
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rJMSF046B11-          TTGCTATTCCAAGGTTTTAGACGCTCCAACTTCCAACTGAATCAGGGTTTTAGCTCTACC
JMFN010D13+           TTGCTATTCCAAGGT                                             
JMSF046B11+           TTGCTATTCCAAGGTTTTAGACGCTCCAACTTCCAACTGAATCAGGGTTTTAGCTCTACC
                      ____________________________________________________________
consensus             TTGCTATTCCAAGGTTTTAGACGCTCCAACTTCCAACTGAATCAGGGTTTTAGCTCTACC