Contig 005276:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009M23Sequence588005276 (4)gb|AAS79591.1|1e-107putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica749013640 (4)gb|KJB09011.1|5e-100hypothetical protein B456_001G118900 [Gossypium raimondii]
JMSF024C14Sequence686005276 (4)gb|AAS79591.1|7e-134putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica738013640 (4)gb|KJB09011.1|4e-108hypothetical protein B456_001G118900 [Gossypium raimondii]
JMSF037A11Sequence666005276 (4)gb|AAS79591.1|5e-109putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica727013640 (4)gb|KJB09011.1|7e-105hypothetical protein B456_001G118900 [Gossypium raimondii]
JMSF045K20Sequence788005276 (4)gb|AAS79591.1|3e-134putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica739013640 (4)gb|KJB09011.1|8e-93hypothetical protein B456_001G118900 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF024C14+                                                                 TCAGCA
JMSF045K20+                                                               CCTCAGCA
                      ____________________________________________________________
consensus                                                                 CCTCAGCA
 
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JMSF024C14+           TAGACCAATCTCTCAATCAATTGCTTTGCACATGCATAGGACCACCTCTGCTTCTCAATG
JMSF045K20+           TAGACCAATCTCTCAATCAATTGCTTTGCACATGCATAGGACCACCTCTGCTTCTCAATG
                      ____________________________________________________________
consensus             TAGACCAATCTCTCAATCAATTGCTTTGCACATGCATAGGACCACCTCTGCTTCTCAATG
 
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JMSF024C14+           GGGCCAAAAATGCAAGGAGAGTCATCTTCCTTAAGAACATAGTACGCAGGATCCTGCCGC
JMSF037A11+                                      TCCTTAAGAACATAGTACGCAGGATCCTGCCGC
JMFF009M23+                                            AGAACATAGTACGCAGGATCCTGCCGC
JMSF045K20+           GGGCCAAAAATGCAAGGAGAGTCATCTTCCTTAAGAACATAGTACGCAGGATCCTGCCGC
                      ____________________________________________________________
consensus             GGGCCAAAAATGCAAGGAGAGTCATCTTCCTTAAGAACATAGTACGCAGGATCCTGCCGC
 
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JMSF024C14+           AAAGGACTATCTTTGGGTAAGAAGCAGCCTATGGTTTTCCCATAAACTTCACAGGTAGAA
JMSF037A11+           AAAGGACTATCTTTGGGTAAGAAGCAGCCTATGGTTTTCCCATAAACTTCACAGGTAGAA
JMFF009M23+           AAAGGACTATCTTTGGGTAAGAAGCAGCCTATGGTTTTCCCATAAACTTCACAGGTAGAA
JMSF045K20+           AAAGGACTATCTTTGGGTAAGAAGCAGCCTATGGTTTTCCCATAAACTTCACAGGTAGAA
                      ____________________________________________________________
consensus             AAAGGACTATCTTTGGGTAAGAAGCAGCCTATGGTTTTCCCATAAACTTCACAGGTAGAA
 
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JMSF024C14+           AAGTGAATAAGACGCTTACTATTCTCTGAACAGTACTTGACCACAGGCAGAGCATCAATG
JMSF037A11+           AAGTGAATAAGACGCTTACTATTCTCTGAACAGTACTTGACCACAGGCAGAGCATCAATG
JMFF009M23+           AAGTGAATAAGACGCTTACTATTCTCTGAACAGTACTTGACCACAGGCAGAGCATCAATG
JMSF045K20+           AAGTGAATAAGACGCTTACTATTCTCTGAACAGTACTTGACCACAGGCAGAGCATCAATG
                      ____________________________________________________________
consensus             AAGTGAATAAGACGCTTACTATTCTCTGAACAGTACTTGACCACAGGCAGAGCATCAATG
 
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JMSF024C14+           AAATTGCTGTAAATTGTGTCAAGAGGACGGGTGTTGTAATCAGCAGGAGTGCAGATCGCA
JMSF037A11+           AAATTGCTGTAAATTGTGTCAAGAGGACGGGTGTTGTAATCAGCAGGAGTGCAGATCGCA
JMFF009M23+           AAATTGCTGTAAATTGTGTCAAGAGGACGGGTGTTGTAATCAGCAGGAGTGCAGATCGCA
JMSF045K20+           AAATTGCTGTAAATTGTGTCAAGAGGACGGGTGTTGTAATCAGCAGGAGTGCAGATCGCA
                      ____________________________________________________________
consensus             AAATTGCTGTAAATTGTGTCAAGAGGACGGGTGTTGTAATCAGCAGGAGTGCAGATCGCA
 
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JMSF024C14+           GCAAGATTTATGGTCAGATCTGCCATCTTGATGAGGCCTTCAAGGCGAGAGTCGTTCTTG
JMSF037A11+           GCAAGATTTATGGTCAGATCTGCCATCTTGATGAGGCCTTCAAGGCGAGAGTCGTTCTTG
JMFF009M23+           GCAAGATTTATGGTCAGATCTGCCATCTTGATGAGGCCTTCAAGGCGAGAGTCGTTCTTG
JMSF045K20+           GCAAGATTTATGGTCAGATCTGCCATCTTGATGAGGCCTTCAAGGCGAGAGTCGTTCTTG
                      ____________________________________________________________
consensus             GCAAGATTTATGGTCAGATCTGCCATCTTGATGAGGCCTTCAAGGCGAGAGTCGTTCTTG
 
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JMSF024C14+           ATGTTGAGGCGGTGAAACTGGATGCGATCGGCCCAGGGGTGGGAGGAGGCGGGCTCGAGT
JMSF037A11+           ATGTTGAGGCGGTGAAACTGGATGCGATCGGCCCAGGGGTGGGAGGAGGCGGGCTCGAGT
JMFF009M23+           ATGTTGAGGCGGTGAAACTGGATGCGATCGGCCCAGGGGTGGGAGGAGGCGGGCTCGAGT
JMSF045K20+           ATGTTGAGGCGGTGAAACTGGATGCGATCGGCCCAGGGGTGGGAGGAGGCGGGCTCGAGT
                      ____________________________________________________________
consensus             ATGTTGAGGCGGTGAAACTGGATGCGATCGGCCCAGGGGTGGGAGGAGGCGGGCTCGAGT
 
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JMSF024C14+           AGGTGCTTGATCTTGTCATTGTACACGTCCACCGCGAGAACCGTGTGCTGCGTCTCCGAC
JMSF037A11+           AGGTGCTTGATCTTGTCATTGTACACGTCCACCGCGAGAACCGTGTGCTGCGTCTCCGAC
JMFF009M23+           AGGTGCTTGATCTTGTCACTGTACACGTCCACCGCGAGAACCGTGTGCTGCGTCTCCGAC
JMSF045K20+           AGGTGCTTGATCTTGTCATTGTACACGTCCACCGCGAGAACCGTGTGCTGCGTCTCCGAC
                      ____________________________________________________________
consensus             AGGTGCTTGATCTTGTCATTGTACACGTCCACCGCGAGAACCGTGTGCTGCGTCTCCGAC
 
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JMSF024C14+           ATCAGCTTCTCGCAGAGGTGGGACCCTATGAACCCTCCGGCGCCAATCATACATATCTTA
JMSF037A11+           ATCAGCTTCTCGCAGAGGTGGGACCCTATGAACCCTCCGGCGCCAATCATACATATCTTA
JMFF009M23+           ATCAGCTTCTCGCAGAGGTGGGACCCTATGAACCCTCCGGCGCCAATCATACATATCTTA
JMSF045K20+           ATCAGCTTCTCGCAGAGGTGGGACCCTATGAACCCTCCGGCGCCAATCATACATATCTTA
                      ____________________________________________________________
consensus             ATCAGCTTCTCGCAGAGGTGGGACCCTATGAACCCTCCGGCGCCAATCATACATATCTTA
 
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JMSF024C14+           ATCGGCTTTATCGGATTCCCGTCGAGATCTACTCTCCCTGCCATTTCCGCTGAAATTCGC
JMSF037A11+           ATCGGCTTTATCGGATTCCCGTCGAGATCTACTCTCCCTGCCATTTCCGCTGAAATTCGC
JMFF009M23+           ATCGGCTTTATCGGATTCCCGTCGAGATCTACTCTCCCTGCCATTTCCGCTGAAATTCGC
JMSF045K20+           ATCGGCTTTATCGGATTCCCGTCGAGATCTACTCTCCCTGCCATTTCCGCTGAAATTCGC
                      ____________________________________________________________
consensus             ATCGGCTTTATCGGATTCCCGTCGAGATCTACTCTCCCTGCCATTTCCGCTGAAATTCGC
 
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JMSF024C14+           ACTCTCTTCTTCTCCTTCCTCGGCTTTCAGTTTCTCCCAGCTTTCTCTATACACAAATGG
JMSF037A11+           ACTCTCTTCTTCTCCTTCCTCGGCTTTCAGTTTCTCCCAGCTTTCTCTATACACAAATGG
JMFF009M23+           ACTCTCTTCTTCTCCTTCCTCGGCTTTCAGTTTCTCCCAGCTTTCTCTATACACAAATGG
JMSF045K20+           ACTCTCTTCTTCTCCTTCCTCGGCTTTCAGTTTCTCCCAGCTTTCTCTATACACAAATGG
                      ____________________________________________________________
consensus             ACTCTCTTCTTCTCCTTCCTCGGCTTTCAGTTTCTCCCAGCTTTCTCTATACACAAATGG
 
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JMSF024C14+           CGATATTTCTCTGGATTTC                                         
JMSF037A11+           CGATATTTCTCTGGATTTCACGGTGGTGGAGGGGAGGCTTTGGGCATTTAAAGGAGGAAA
JMFF009M23+           CGATATTTCTCTGGATTTC                                         
JMSF045K20+           CGATATTTCTCTGGATTTCACGGTGGTGGAGGGGAGGCTTTGGGCATTTAAAGGAGGAAA
                      ____________________________________________________________
consensus             CGATATTTCTCTGGATTTCACGGTGGTGGAGGGGAGGCTTTGGGCATTTAAAGGAGGAAA
 
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JMSF037A11+           AAGGAGGGAGGGGAGAGATGCCCGGAGTCTGT                            
JMSF045K20+           AAGGAGGGAGGGGAGAGATGCCCGGAGTCTGTGGCCCGGCTCATTTCCTAGTATACGCCC
                      ____________________________________________________________
consensus             AAGGAGGGAGGGGAGAGATGCCCGGAGTCTGTGGCCCGGCTCATTTCCTAGTATACGCCC