Contig 005261:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013G11Sequence527005261 (3)ref|XP_011098318.1|1e-06PREDICTED: probable ubiquitin-conjugating enzyme E2 26 [Sesamum indicum]748002546 (2)ref|XP_009626762.1|4e-75PREDICTED: probable ubiquitin-conjugating enzyme E2 25 [Nicotiana tomentosiform
JMFS101E08Sequence590005261 (3)ref|XP_009759971.1|2e-09PREDICTED: probable ubiquitin-conjugating enzyme E2 26 [Nicotiana sylvestris]
JMSF043L11Sequence808005261 (3)ref|XP_009775370.1|112PREDICTED: uncharacterized protein LOC104225299 [Nicotiana sylvestris]762002546 (2)ref|XP_009626762.1|1e-91PREDICTED: probable ubiquitin-conjugating enzyme E2 25 [Nicotiana tomentosiform

Alignment

This contig is upended


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JMSF043L11+                                          AGGAGCAGGCCACCAGGGAATTGATGCCT
                      ____________________________________________________________
consensus                                            AGGAGCAGGCCACCAGGGAATTGATGCCT
 
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JMSF043L11+           CAATTCCTGGAGGAACATCCATTCTATCAAGGTACACTTGCAAATTTTTGTACTGATCAA
                      ____________________________________________________________
consensus             CAATTCCTGGAGGAACATCCATTCTATCAAGGTACACTTGCAAATTTTTGTACTGATCAA
 
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JMSF043L11+           GCGCTGACTCATCATAAAACATGTCCATATGCTCATTATCTCCATATAAGTCATCAGGGT
                      ____________________________________________________________
consensus             GCGCTGACTCATCATAAAACATGTCCATATGCTCATTATCTCCATATAAGTCATCAGGGT
 
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JMFS101E08+                                                      ATTTTTAGTCAGAAACC
JMSF043L11+           CCTCCAAGTTTATTACATTTTGTGGTTCAGAAGTGAAATTCTTATTTTTAGTCAGAAACC
                      ____________________________________________________________
consensus             CCTCCAAGTTTATTACATTTTGTGGTTCAGAAGTGAAATTCTTATTTTTAGTCAGAAACC
 
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JMFS101E08+           CCTTGACTGTTGCAGTATTTTCTGAACCACCACCGGTACCAAGTGAAAGATCGACAAATA
JMSF043L11+           CCTTGACTGTTGCAGTATTTTCTGAACCACCACCGGTACCAAGTGAAAGATCGACAAATA
                      ____________________________________________________________
consensus             CCTTGACTGTTGCAGTATTTTCTGAACCACCACCGGTACCAAGTGAAAGATCGACAAATA
 
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JMFS101E08+           TCTCCTTCCCTTTGCCATTTGGTATAAAACTCCCTTCTCCAAGCCGAGCATCATTACAAT
JMFF013G11+                       TGCCATTTGGTATAAAACTCCCTTCTCCAAGCCGAGCATCATTACAAT
JMSF043L11+           TCTCCTTCCCTTTGCCATTTGGTATAAAACTCCCTTCTCCAAGCCGAGCATCATTACAAT
                      ____________________________________________________________
consensus             TCTCCTTCCCTTTGCCATTTGGTATAAAACTCCCTTCTCCAAGCCGAGCATCATTACAAT
 
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JMFS101E08+           CTTCTTCGATGTCAACATCAATTATATCATAAATCTCCTTCCGTTTAAGAGAGTTGGAAG
JMFF013G11+           CTTCTTCGATGTCAACATCAATTATATCATAAATCTCCTTCCGTTTAAGAGAGTTGGAAG
JMSF043L11+           CTTCTTCGATGTCAACATCAATTATATCATAAATCTCCTTCCGTTTAAGAGAGTTGGAAG
                      ____________________________________________________________
consensus             CTTCTTCGATGTCAACATCAATTATATCATAAATCTCCTTCCGTTTAAGAGAGTTGGAAG
 
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JMFS101E08+           TCCGATTAATCGGCGGCGCAATCTCAACGACTTCCTCTTCCATTGAGCTTCCGCCGGGGA
JMFF013G11+           TCCGATTAATCGGCGGCGCAATCTCAACGACTTCCTCTTCCATTGAGCTTCCGCCGGGGA
JMSF043L11+           TCCGATTAATCGGCGGCGCAATCTCAACGACTTCCTCTTCCATTGAGCTTCCGCCGGGGA
                      ____________________________________________________________
consensus             TCCGATTAATCGGCGGCGCAATCTCAACGACTTCCTCTTCCATTGAGCTTCCGCCGGGGA
 
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JMFS101E08+           ACACTCTTTTCTTAGAACTGTGGGGAACGTATCGAGCGAGCGGCGGCGGAGATTCCATGG
JMFF013G11+           ACACTCTTTTCTTAGAACTGTGGGGAACGTATCGAGCGAGCGGCGGCGGAGATTCCATGG
JMSF043L11+           ACACTCTTTTCTTAGAACTGTGGGGAACGTATCGAGCGAGCGGCGGCGGAGATTCCATGG
                      ____________________________________________________________
consensus             ACACTCTTTTCTTAGAACTGTGGGGAACGTATCGAGCGAGCGGCGGCGGAGATTCCATGG
 
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JMFS101E08+           GTGGATTTCTAGAAAACAAAAAGAAGACTTCCCAATATAGAAGAGGCAGTTAGGGCAAGG
JMFF013G11+           GTGGATTTCTAGAAAACAAAAAGAAGACTTCCCAATATAGAAGAGGCAGTTAGGGCAAGG
JMSF043L11+           GTGGATTTCTAGAAAACAAAAAGAAGACTTCCCAATATAGAAGAGGCAGTTAGGGCAAGG
                      ____________________________________________________________
consensus             GTGGATTTCTAGAAAACAAAAAGAAGACTTCCCAATATAGAAGAGGCAGTTAGGGCAAGG
 
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JMFS101E08+           AGAGTTTTGGGCTGTGTCAATCTCTTCACTTTTCAGATAATCATCAG-AAAAAATAAAAT
JMFF013G11+           AGAGTTTTGGGCTGTGTCAATCTCTTCACTTTTCAGATAATCATCAGAAAAAAATAAAAT
JMSF043L11+           AGAGTTTTGGGCTGTGTCAATCTCTTCACTTTTCAGATAATCATCAG-AAAAAATAAAAT
                      ____________________________________________________________
consensus             AGAGTTTTGGGCTGTGTCAATCTCTTCACTTTTCAGATAATCATCAG-AAAAAATAAAAT
 
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JMFS101E08+           TCCCGAGGATCCCTACATACATAAAAACAACCCACAAAAAGAGAACCCCGTAAATTTCTC
JMFF013G11+           TCCCGAGGATCCCTACATACATAAAAACAACCCACAAAAAGAGAACCCCGTAAATTTCTC
JMSF043L11+           TCCCGAGGATCCCTACATACATAAAAACAACCCACAAAAAGAGAACCCCGTAAATTTCTC
                      ____________________________________________________________
consensus             TCCCGAGGATCCCTACATACATAAAAACAACCCACAAAAAGAGAACCCCGTAAATTTCTC
 
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JMFS101E08+           ACTTCATCCCTACCCTTTCCTTCTCGGGAGAATCTTGATTTTCCGACAGTGGCTTTGGCG
JMFF013G11+           ACTTCATCCCTACCCTTTCCTTCTCGGGAGAATCTTGATTTTCCGACAGTGGCTTTGGCG
JMSF043L11+           ACTTCATCCCTACCCTTTCCTTCTCGGGAGAATCTTGATTTTCCGACAGTGGCTTTGGCG
                      ____________________________________________________________
consensus             ACTTCATCCCTACCCTTTCCTTCTCGGGAGAATCTTGATTTTCCGACAGTGGCTTTGGCG
 
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JMFS101E08+           CCTGCTAAGTAGAGGCGGTCGAACTCCAAGGTGG                          
JMFF013G11+           CCTGCTAAGTAGAGGCGGTCGAACTCCAAGGTGGCTTATTCAGAGTGCGTTTGAAGGG  
JMSF043L11+           CCTGCTAAGTAGAGGCGGTCGAACTCCAAGGTGGCTTATTCAGAGTGCGTTTGAAGGGCC
                      ____________________________________________________________
consensus             CCTGCTAAGTAGAGGCGGTCGAACTCCAAGGTGGCTTATTCAGAGTGCGTTTGAAGGGCC