| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF044L07 | Sequence | 655 | 005259 (7) | ref|XP_009629715.1| | 4e-56 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | |||||
| JMFS115C02 | Sequence | 549 | 005259 (7) | ref|XP_009629715.1| | 5e-55 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | |||||
| JMSF014A16 | Sequence | 316 | 005259 (7) | ref|XP_009629715.1| | 1e-08 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | 780 | 006864 (6) | ref|XP_009784948.1| | 3e-101 | PREDICTED: ABC transporter A family member 11-like [Nicotiana sylvestris] |
| JMSF014F12 | Sequence | 526 | 005259 (7) | ref|XP_009629715.1| | 1e-35 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | 784 | 006864 (6) | ref|XP_009784948.1| | 2e-101 | PREDICTED: ABC transporter A family member 11-like [Nicotiana sylvestris] |
| JMSF016B21 | Sequence | 473 | 005259 (7) | ref|XP_009629715.1| | 4e-36 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | 389 | 006864 (6) | ref|XP_010322562.1| | 5e-33 | PREDICTED: ABC transporter A family member 11-like [Solanum lycopersicum] |
| JMSF025L17 | Sequence | 624 | 005259 (7) | ref|XP_009629715.1| | 1e-72 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | 640 | 007098 (12) | ref|XP_009804707.1| | 8e-106 | PREDICTED: heme-binding-like protein At3g10130, chloroplastic isoform X2 [Nicot |
| JMSF043F10 | Sequence | 854 | 005259 (7) | ref|XP_009629715.1| | 4e-79 | PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis] | 801 | 006864 (6) | ref|XP_009784948.1| | 4e-102 | PREDICTED: ABC transporter A family member 11-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF043F10+ GTTAAGTCATATTT
____________________________________________________________
consensus GTTAAGTCATATTT
. : . : . : . : . : . :
JMSF043F10+ TTACTATAAGGTCCATTATTACAAAAAATGAAAAATATGATCATGTTTATTAATTAATTT
____________________________________________________________
consensus TTACTATAAGGTCCATTATTACAAAAAATGAAAAATATGATCATGTTTATTAATTAATTT
. : . : . : . : . : . :
JMSF043F10+ ATAATGTACCCTTAATTAATATACTTAATTACCTCCAATTAAAGATCTAGCAATTTCTCT
____________________________________________________________
consensus ATAATGTACCCTTAATTAATATACTTAATTACCTCCAATTAAAGATCTAGCAATTTCTCT
. : . : . : . : . : . :
JMSF025L17+ TGATGCAGCAAGTTGGAGAGGAATTCTGAACTTGAAAGTGGGATCTTCAATCTGCCTTGG
JMFF044L07+ G
JMSF043F10+ TGATGCAGCAAGTTGGAGAGGAATTCTGAACTTGAAAGTGGGATCTTCAATCTGCCTTGG
____________________________________________________________
consensus TGATGCAGCAAGTTGGAGAGGAATTCTGAACTTGAAAGTGGGATCTTCAATCTGCCTTGG
. : . : . : . : . : . :
JMSF025L17+ GACTTCAATATAAGTTGATGAATTTGTTAGAACACCATAGCTTATCACTGTTGCATTCTT
JMFF044L07+ GACTTCAATATAAGTTGATGAATTTG-TAGAACACCATAGCTTATCACTGTGCCATTCTN
JMFS115C02+ AGCTTATCACTGTTGCATTCTT
JMSF043F10+ GACTTCAATATAAGTTGATGAATTTGTTAGAACACCATAGCTTATCACTGTTGCATTCTT
____________________________________________________________
consensus GACTTCAATATAAGTTGATGAATTTGTTAGAACACCATAGCTTATCACTGTTGCATTCTT
. : . : . : . : . : . :
JMSF025L17+ TTCCTCAAAATGAAGAGCTCCCGGGGTACGCATTGGCTCTTGTAGAAGCCAATTAATCAA
JMFF044L07+ TTCCTCAAAATGAAGAGCTCCCGGGGTACGCATTGGCTCTTGTAGAAGCCAATTAATCAA
JMFS115C02+ TTCCTCAAAATGAAGAGCTCCCGGGGTACGCATTGGCTCTTGTAGAAGCCAATTAATCAA
JMSF043F10+ TTCCTCAAAATGAAGAGCTCCCGGGGTACGCATTGGCTCTTGTAGAAGCCAATTAATCAA
____________________________________________________________
consensus TTCCTCAAAATGAAGAGCTCCCGGGGTACGCATTGGCTCTTGTAGAAGCCAATTAATCAA
. : . : . : . : . : . :
JMSF025L17+ CTCATCTTTGCTTGCAAATGATATAACCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
JMFF044L07+ CTCATCTTTGCTTGCAAATGATATAACCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
JMFS115C02+ CTCATCTTTGCTTGCAAATGATATAACCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
JMSF014F12+ CAAATGATATACCCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
JMSF016B21+ CAAATGATATANCCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
JMSF043F10+ CTCATCTTTGCTTGCAAATGATATAACCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
____________________________________________________________
consensus CTCATCTTTGCTTGCAAATGATATAACCTTACTCGCCGGAATTGGGCGGCCGGGATTGTT
. : . : . : . : . : . :
JMSF025L17+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
JMFF044L07+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
JMFS115C02+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
JMSF014F12+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
JMSF016B21+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
JMSF043F10+ TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
____________________________________________________________
consensus TGCAAGGATTCCGGCGACGATGGCCTGAATCCTGGAACTGCTGCTGCCGCTCCAGGCGAA
. : . : . : . : . : . :
JMSF025L17+ ATNGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
JMFF044L07+ ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
JMFS115C02+ ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
JMSF014F12+ ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
JMSF016B21+ ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
JMSF043F10+ ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
____________________________________________________________
consensus ATCGAAACACGGGCGTTTGATGAAGAGCTTGTGCTCGCAGGCGGGAATAGAAGGGTCGGT
. : . : . : . : . : . :
JMSF025L17+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
JMFF044L07+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
JMFS115C02+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
JMSF014F12+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
JMSF016B21+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
JMSF014A16+ TGGAACGGTAATCGGT
JMSF043F10+ GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
____________________________________________________________
consensus GGCGGCTTGAGGATCGGCGACGGCGGCGACGGCGGAGGGGTGCCTGGAACGGTAATCGGT
. : . : . : . : . : . :
JMSF025L17+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMFF044L07+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMFS115C02+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMSF014F12+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMSF016B21+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMSF014A16+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
JMSF043F10+ GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
____________________________________________________________
consensus GGCCTTTTGGATTCCGAACAAGAGAGCAATGAAGAAGAGGGAGGAGAAGAGGTGAAGGAA
. : . : . : . : . : . :
JMSF025L17+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTN
JMFF044L07+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
JMFS115C02+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
JMSF014F12+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
JMSF016B21+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
JMSF014A16+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
JMSF043F10+ GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
____________________________________________________________
consensus GGTAGTCCTCTTGTTTCTCAAGGATAGAAGGATGTTCTTCTTCAGCAGGGCTGTGGTTTG
. : . : . : . : . : . :
JMSF025L17+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMFF044L07+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMFS115C02+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMSF014F12+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMSF016B21+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMSF014A16+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
JMSF043F10+ CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
____________________________________________________________
consensus CTGTCTCAGAAGAGGAAACCCTCTCTGCAACTCCGTCGCCATCTCCGTCAGTCTCGCCAG
. : . : . : . : . : . :
JMSF025L17+ CCAGTACTGAGTACTATGTTTCT
JMFF044L07+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
JMFS115C02+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGT
JMSF014F12+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
JMSF016B21+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
JMSF014A16+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
JMSF043F10+ CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
____________________________________________________________
consensus CCAGTACTGAGTACTATGTTTCTGTGTGGTTGTCGAAGACTTTCGGTATTATATCTCCGA
. : . : . : . : . : . :
JMFF044L07+ CTCCGCGTGGTAAAACTAGGAATAAT
JMSF014F12+ CTCCGCGTGGTAAAACTAGGAATAATGCTATTTTATTTCTCCTCCAATCTTCTCAACT
JMSF016B21+ CTCCGC
JMSF014A16+ CTCCGCGTGGTAAAACTAGGAATAATGCTATTTTATTTCTCCTCCAATCTTCTCAACT
JMSF043F10+ CTCCGCGTGGTAAAACTAGGAATAATGCTATTTTATTTCTCCTCCAATCTTCTCAACTCC
____________________________________________________________
consensus CTCCGCGTGGTAAAACTAGGAATAATGCTATTTTATTTCTCCTCCAATCTTCTCAACTCC