| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012K05 | Sequence | 603 | 005254 (5) | ref|XP_006364261.1| | 132 | PREDICTED: uncharacterized protein LOC102591205 [Solanum tuberosum] | 743 | 012469 (4) | gb|KDO67099.1| | 3e-106 | hypothetical protein CISIN_1g0075872mg, partial [Citrus sinensis] gb|KDO67100.1| |
| JMFF049F22 | Sequence | 610 | 005254 (5) | ref|XP_006364261.1| | 139 | PREDICTED: uncharacterized protein LOC102591205 [Solanum tuberosum] | 542 | 012469 (4) | ref|XP_006364261.1| | 179 | PREDICTED: uncharacterized protein LOC102591205 [Solanum tuberosum] |
| JMFS132D07 | Sequence | 632 | 005254 (5) | ref|XP_006364261.1| | 158 | PREDICTED: uncharacterized protein LOC102591205 [Solanum tuberosum] | |||||
| JMSF029B08 | Sequence | 647 | 005254 (5) | ref|XP_006364261.1| | 129 | PREDICTED: uncharacterized protein LOC102591205 [Solanum tuberosum] | 699 | 012469 (4) | gb|KDO67099.1| | 3e-105 | hypothetical protein CISIN_1g0075872mg, partial [Citrus sinensis] gb|KDO67100.1| |
| JMSF042C21 | Sequence | 771 | 005254 (5) | ref|XP_009627832.1| | 197 | PREDICTED: uncharacterized protein LOC104118315 [Nicotiana tomentosiformis] | 746 | 012469 (4) | gb|KDO67099.1| | 1e-111 | hypothetical protein CISIN_1g0075872mg, partial [Citrus sinensis] gb|KDO67100.1| |
This contig is upended
. : . : . : . : . : . :
JMSF042C21+ TGATCGGCACTCCTTACCAGAGCCTTGACTGTGTAACCCCTAAGCATGAGC
____________________________________________________________
consensus TGATCGGCACTCCTTACCAGAGCCTTGACTGTGTAACCCCTAAGCATGAGC
. : . : . : . : . : . :
JMFS132D07+ GCCGACGCGGCTGGTAGCCCCGACGACGAGGACGGTGGTGTTC
JMFF049F22+ TGGTGTTC
JMSF042C21+ TTCCGGACAACGATGCGGCCGACGCGGCTGGTAGCCCCGACGACGAGGACGGTGGTGTTN
____________________________________________________________
consensus TTCCGGACAACGATGCGGCCGACGCGGCTGGTAGCCCCGACGACGAGGACGGTGGTGTTC
. : . : . : . : . : . :
JMSF029B08+ CCAGGGATGGCGAATTCGCACATTGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
JMFS132D07+ TGCGCCCCAGGGATGGCGAATTCGCACATTGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
JMFF012K05+ TGCGCCCCAGGGATGGCGAATTCGCACATTGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
JMFF049F22+ TGCGCCCCAGGGATGGCGAATTCGCACATGGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
JMSF042C21+ TGCGCCCCAGGGATGGCGAATTCGCACATTGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
____________________________________________________________
consensus TGCGCCCCAGGGATGGCGAATTCGCACATTGGGCCCCCCTCGCGGATAAGAAGGCTCGCC
. : . : . : . : . : . :
JMSF029B08+ TCATCGTCGGTGCGGTTGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
JMFS132D07+ TCATCGTCGGTGCGGTTGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
JMFF012K05+ TCATCGTCGGTGCGGTTGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
JMFF049F22+ TCATCGTCGGTGCGGTGGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
JMSF042C21+ TCATCGTCGGTGCGGTTGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
____________________________________________________________
consensus TCATCGTCGGTGCGGTTGGTCCTGGAAATCTGCCCTAATCCGGAGAATTTCCGCCACACT
. : . : . : . : . : . :
JMSF029B08+ TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTCATCGAGTCTC
JMFS132D07+ TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTAATCGAGTCTC
JMFF012K05+ TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTCATCGAGTCTC
JMFF049F22+ TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTCATCGAGTCTC
JMSF042C21+ TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTCATCGAGTCTC
____________________________________________________________
consensus TCGTCGAAAATTTGACGCGAACGTCGCCCCAACCCCACTGGATTCACTTCATCGAGTCTC
. : . : . : . : . : . :
JMSF029B08+ TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
JMFS132D07+ TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
JMFF012K05+ TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
JMFF049F22+ TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
JMSF042C21+ TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
____________________________________________________________
consensus TTTATGACGGACACTGAAGACGACGATTGATCCTCGCCGTTGAACGAGCTAGTAATTTCT
. : . : . : . : . : . :
JMSF029B08+ CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
JMFS132D07+ CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
JMFF012K05+ CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
JMFF049F22+ CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
JMSF042C21+ CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
____________________________________________________________
consensus CCGGCGTCATTCTCCTTGTTCTCCTCCTCCTCGCCGTCGTCATTCTGAAGCTCCGTCTTC
. : . : . : . : . : . :
JMSF029B08+ TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
JMFS132D07+ TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
JMFF012K05+ TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
JMFF049F22+ TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
JMSF042C21+ TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
____________________________________________________________
consensus TTCTTCCTCCTCCTCCTCTTCTTCTTGTCCTTGCCAACGGCGTCGGGAGTAGAAGAAGAA
. : . : . : . : . : . :
JMSF029B08+ ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
JMFS132D07+ ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
JMFF012K05+ ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
JMFF049F22+ ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
JMSF042C21+ ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
____________________________________________________________
consensus ACAGTCGCCCTCGAAACAACAAACCCGCTCCAACCCCCACTCCCACCCGCCGTCGCGATA
. : . : . : . : . : . :
JMSF029B08+ CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
JMFS132D07+ CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
JMFF012K05+ CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
JMFF049F22+ CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
JMSF042C21+ CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
____________________________________________________________
consensus CGGATTGTTCCGGCCGACACGGAATCAAACGGAGACGGCTTCGATCTCCATATTCGCTGA
. : . : . : . : . : . :
JMSF029B08+ TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
JMFS132D07+ TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
JMFF012K05+ TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
JMFF049F22+ TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
JMSF042C21+ TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
____________________________________________________________
consensus TTACCGTTGAACCCGACGGCCGTAGCAGCTGTGAAAGCACTGCTCATCTCTTCAAAAAAA
. : . : . : . : . : . :
JMSF029B08+ TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGCCCCCGCTCTCT
JMFS132D07+ TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGC
JMFF012K05+ TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGCCCCCGCTCTCT
JMFF049F22+ TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGCCCCCGCTCTCT
JMSF042C21+ TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGCCCCCGCTCTCT
____________________________________________________________
consensus TCAAACACCCTGAGAAATCTCTCCCGCTTCAATCAAATCTCCGCCGAGCCCCCGCTCTCT
. : . : . : . : . : . :
JMSF029B08+ CTCGGGTTTCTCCAAAATGGCGTCGATCGGAGAGTAATGCTGGTGGCTAGTC
JMFF012K05+ CT
JMFF049F22+ CT
JMSF042C21+ CTCGGGTTTCTCCAAAATGGCGTCGATCGGAGAGTAATGCTGGTGGCTAGTCAGGCACCC
____________________________________________________________
consensus CTCGGGTTTCTCCAAAATGGCGTCGATCGGAGAGTAATGCTGGTGGCTAGTCAGGCACCC