Contig 005252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032I14Sequence646005252 (3)ref|XP_004230190.1|249PREDICTED: uncharacterized protein LOC101264675 [Solanum lycopersicum]744005252 (3)emb|CDP15516.1|1e-117unnamed protein product [Coffea canephora]
JMSF041M01Sequence738005252 (3)ref|XP_004230190.1|307PREDICTED: uncharacterized protein LOC101264675 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF032I14-                                          ATTTCATTCATGTGGAATTGCAATTCCC
                      ____________________________________________________________
consensus                                             ATTTCATTCATGTGGAATTGCAATTCCC
 
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rJMSF032I14-          TCCCACCAAACAATGTAATTGAGGTATTCATTGAATTGCATTTCAACTAAAACGAAATTA
                      ____________________________________________________________
consensus             TCCCACCAAACAATGTAATTGAGGTATTCATTGAATTGCATTTCAACTAAAACGAAATTA
 
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rJMSF032I14-          CAGTGAACCAAACGCCCTGAAAGGTATGCCTCTCTTGTATATAGAGAGAGAAGAAATAGG
                      ____________________________________________________________
consensus             CAGTGAACCAAACGCCCTGAAAGGTATGCCTCTCTTGTATATAGAGAGAGAAGAAATAGG
 
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rJMSF032I14-          ATTTGATGAAACAACTAATTATCTTGAAATTACTTTCATGAAACGATTGATGGAAGAGAA
                      ____________________________________________________________
consensus             ATTTGATGAAACAACTAATTATCTTGAAATTACTTTCATGAAACGATTGATGGAAGAGAA
 
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rJMSF032I14-          GATTCCAGCTGCTTGGTCAAACAGAGATGCTCCCTTCTCTTGCTTCTCATCTACTTCTCC
                      ____________________________________________________________
consensus             GATTCCAGCTGCTTGGTCAAACAGAGATGCTCCCTTCTCTTGCTTCTCATCTACTTCTCC
 
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rJMSF032I14-          AAATATTATCTCCAGTTCTTCTGCAGTGGGGCGGCTAATCTGCTCCTTGGCTAGGAGATA
                      ____________________________________________________________
consensus             AAATATTATCTCCAGTTCTTCTGCAGTGGGGCGGCTAATCTGCTCCTTGGCTAGGAGATA
 
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rJMSF032I14-          ACGGCCAAGCCGATCCTTATTATCATAGAACACCTTCCACAATCCGGGATAACATCTAAA
                      ____________________________________________________________
consensus             ACGGCCAAGCCGATCCTTATTATCATAGAACACCTTCCACAATCCGGGATAACATCTAAA
 
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rJMSF032I14-          AACAGCACCTGATGGAAAAGGTCTCATTGAGTAAACCACTGAGAAAGTGCTTAAGAAGTT
                      ____________________________________________________________
consensus             AACAGCACCTGATGGAAAAGGTCTCATTGAGTAAACCACTGAGAAAGTGCTTAAGAAGTT
 
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rJMSF032I14-          GCGCCTTAATCTGCGCACATTGATCCCAACACCGACATCTTCACTAACAAGGCGTGGATT
JMSF041M01+                                                     ACTAACAAGGCGTGGATT
                      ____________________________________________________________
consensus             GCGCCTTAATCTGCGCACATTGATCCCAACACCGACATCTTCACTAACAAGGCGTGGATT
 
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rJMSF032I14-          CCACATGATTAGAGGCCTAGGCGGATCATCAGAGAGATTAGAGGCAATTCTTTCTACGTA
JMSF041M01+           CCACATGATTAGAGGCCTAGGCGGATCATCAGAGAGATTAGAGGCAATTCTTTNTACGTA
                      ____________________________________________________________
consensus             CCACATGATTAGAGGCCTAGGCGGATCATCAGAGAGATTAGAGGCAATTCTTTCTACGTA
 
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rJMSF032I14-          TTCCAGCATCTGATAATCAGGAACGACCATGACAACAATTTCATCTTCATTGTCCACTGG
JMSF032I14+                         AATCAGGAACGACCATGACAACAATTTCATCTTCATTGTCCACTGG
JMSF041M01+           TTCCAGCATCTGATAATCAGGAACGACCATGACAACAATTTCATCTTCATTGTCCACTGG
                      ____________________________________________________________
consensus             TTCCAGCATCTGATAATCAGGAACGACCATGACAACAATTTCATCTTCATTGTCCACTGG
 
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rJMSF032I14-          CTTCCGGTCACCAAGACTCGAGAAACCAAAAGCAGCATCTTTCCATTGATATTTCAAAAG
JMSF032I14+           CTTCCGGTCACCAAGACTCGAGAAACCAAAAGCAGCATCTTTCCATTGATATTTCAAAAG
JMSF041M01+           CTTCCGGTCACCAAGACTCGAGAAACCAAAAGCAGCATCTTTCCATTGATATTTCAAAAG
                      ____________________________________________________________
consensus             CTTCCGGTCACCAAGACTCGAGAAACCAAAAGCAGCATCTTTCCATTGATATTTCAAAAG
 
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rJMSF032I14-          TGCAGCTGCACCAGCATCCGGAAATATAGCTTTAACTCTCTGGCATCCTGNTTCTT    
JMSF032I14+           TGCAGCTGCACCAGCATCCGGAAATATAGCTTTAACTCTCTGGCATCCTGTTTCTTCGAT
JMSF041M01+           TGCAGCTGCACCAGCATCCGGAAATATAGCTTTAACTCTCTGGCATCCTGTTTCTTCGAT
                      ____________________________________________________________
consensus             TGCAGCTGCACCAGCATCCGGAAATATAGCTTTAACTCTCTGGCATCCTGTTTCTTCGAT
 
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JMSF032I14+           TAATGTATTCAAAAATATCCTTGATAGTTCCCAAAGCTCGGCTTGTGCACCCTCGTCATC
JMSF041M01+           TAATGTATTCAAAAATATCCTTGATAGTTCCCAAAGCTCGGCTTGTGCACCCTCGTCATC
                      ____________________________________________________________
consensus             TAATGTATTCAAAAATATCCTTGATAGTTCCCAAAGCTCGGCTTGTGCACCCTCGTCATC
 
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JMSF032I14+           AAGAAATTGCAACTGAGGTATTAGAAGCTCAACTATGGCTCTCATTCCCCCAGAAGACAC
JMSF041M01+           AAGAAATTGCAACTGAGGTATTAGAAGCTCAACTATGGCTCTCATTCCCCCAGAAGACAC
                      ____________________________________________________________
consensus             AAGAAATTGCAACTGAGGTATTAGAAGCTCAACTATGGCTCTCATTCCCCCAGAAGACAC
 
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JMSF032I14+           AAAAGTCGCACCAGCTTGGCCTGACTGCCGAACTGCCCCCTCCAAATCATTAGGTAAGCA
JMSF041M01+           AAAAGTCGCACCAGCTTGGCCTGACTGCCGAACTGCCCCCTCCAAATCATTAGGTAAGCA
                      ____________________________________________________________
consensus             AAAAGTCGCACCAGCTTGGCCTGACTGCCGAACTGCCCCCTCCAAATCATTAGGTAAGCA
 
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JMSF032I14+           ACTGTCATCATCTTCTTCTTCTTCTGGGCTAGGCTGTGATTGTGAGTCTAAAGAAGATGG
JMSF041M01+           ACTGTCATCATCTTCTTCTTCTTCTGGGCTAGGCTGTGATTGTGAGTCTAAAGAAGATGG
                      ____________________________________________________________
consensus             ACTGTCATCATCTTCTTCTTCTTCTGGGCTAGGCTGTGATTGTGAGTCTAAAGAAGATGG
 
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JMSF032I14+           CTCTGTGAAGTCCTGCTCAAGATTCTCTTGGCCTTGGAACTTCTCAAACTTGGCCTGGAG
JMSF041M01+           CTCTGTGAAGTCCTGCTCAAGATTCTCTTGGCCTTGGAACTTCTCAAACTTGGCCTGGAG
                      ____________________________________________________________
consensus             CTCTGTGAAGTCCTGCTCAAGATTCTCTTGGCCTTGGAACTTCTCAAACTTGGCCTGGAG
 
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JMSF032I14+           CCTTGTACTACTGGACAGTGAAATTCCCGTAAGCCCGCGAACGTTCACGGGATATAGAGA
JMSF041M01+           CCTTGTACTACTGGACAGTGAAATTCCCGTAAGCCCGCGAACGTTCACGGGATATAGAGA
                      ____________________________________________________________
consensus             CCTTGTACTACTGGACAGTGAAATTCCCGTAAGCCCGCGAACGTTCACGGGATATAGAGA
 
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JMSF032I14+           CAAAGATGGTGGAGAGGTGGAGGATGATTTGGGAATAGATGCGGAGCACCATGAGAGGGT
JMSF041M01+           CAAAGATGGTGGAGAGGTGGAGGATGATTTGGGAATAGATGCGGAGCACCATGAGAGGGT
                      ____________________________________________________________
consensus             CAAAGATGGTGGAGAGGTGGAGGATGATTTGGGAATAGATGCGGAGCACCATGAGAGGGT
 
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JMSF032I14+           TGAATATGAACAAGCGGCCATGGAAGGAACAGAGTACAGTAGCAGTTATGGAGCACCACC
JMSF041M01+           TGAATATGAACAAGCGGCCATGGAAGGAACAGAGTACAGTAGCAGTTATGGAGCACCACC
                      ____________________________________________________________
consensus             TGAATATGAACAAGCGGCCATGGAAGGAACAGAGTACAGTAGCAGTTATGGAGCACCACC