| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025E21 | Sequence | 558 | 005251 (6) | emb|CDP02510.1| | 1e-82 | unnamed protein product [Coffea canephora] | 740 | 001207 (6) | emb|CDP02510.1| | 3e-74 | unnamed protein product [Coffea canephora] |
| JMFF025P15 | Sequence | 527 | 005251 (6) | emb|CDP02510.1| | 1e-73 | unnamed protein product [Coffea canephora] | 786 | 001207 (6) | emb|CDP02510.1| | 6e-85 | unnamed protein product [Coffea canephora] |
| JMFF035B16 | Sequence | 572 | 005251 (6) | emb|CDP02510.1| | 8e-85 | unnamed protein product [Coffea canephora] | 789 | 001207 (6) | emb|CDP02510.1| | 1e-86 | unnamed protein product [Coffea canephora] |
| JMFF045K01 | Sequence | 557 | 005251 (6) | emb|CDP02510.1| | 6e-82 | unnamed protein product [Coffea canephora] | 648 | 001207 (6) | emb|CDP02510.1| | 4e-43 | unnamed protein product [Coffea canephora] |
| JMSF033F20 | Sequence | 725 | 005251 (6) | emb|CDP02510.1| | 1e-122 | unnamed protein product [Coffea canephora] | 750 | 001207 (6) | emb|CDP02510.1| | 9e-77 | unnamed protein product [Coffea canephora] |
| JMSF041K24 | Sequence | 796 | 005251 (6) | emb|CDP02510.1| | 1e-83 | unnamed protein product [Coffea canephora] | 623 | 001207 (6) | emb|CDP02510.1| | 1e-33 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF033F20+ TTCGCCCTTTTTTGGCATCTTAGACACTGGAAACCAATACTTGTCCAATCCAGCA
____________________________________________________________
consensus TTCGCCCTTTTTTGGCATCTTAGACACTGGAAACCAATACTTGTCCAATCCAGCA
. : . : . : . : . : . :
JMSF033F20+ CCACTGAACACTCTCGTCAAACCTTTAGGGCTATGTACATAATCCTCAATTATAATCGTG
____________________________________________________________
consensus CCACTGAACACTCTCGTCAAACCTTTAGGGCTATGTACATAATCCTCAATTATAATCGTG
. : . : . : . : . : . :
JMSF033F20+ ACTATCTCAGAAGGGTTGGCAGACAAAAAAGCTTCTATTTCTTTAAGCGTGTTAATCGCT
JMFF025E21+ CGCT
JMFF045K01+ GCT
JMFF035B16+ AAGCGTGTTAATCGCT
JMSF041K24+ AAGCGTGTTAATCGCT
____________________________________________________________
consensus ACTATCTCAGAAGGGTTGGCAGACAAAAAAGCTTCTATTTCTTTAAGCGTGTTAATCGCT
. : . : . : . : . : . :
JMSF033F20+ GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
JMFF025E21+ GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
JMFF045K01+ GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
JMFF025P15+ TGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
JMFF035B16+ GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
JMSF041K24+ GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
____________________________________________________________
consensus GGCTCAAAAGCTGTGAAGTTGTAACATTGGCCGCGGAGCGAGTGGCAGAGCCAGATATCA
. : . : . : . : . : . :
JMSF033F20+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
JMFF025E21+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
JMFF045K01+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
JMFF025P15+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
JMFF035B16+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
JMSF041K24+ TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
____________________________________________________________
consensus TTCTCGAAATCATACATATCCAGCATGAATCCCCTCACTCCATTCCTTAACTGGTTAGTA
. : . : . : . : . : . :
JMSF033F20+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
JMFF025E21+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
JMFF045K01+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
JMFF025P15+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
JMFF035B16+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
JMSF041K24+ ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
____________________________________________________________
consensus ACAGTGTCTTCTTGATTACAGAAAGTAAGTCTCTGAGCTCCTGTCAGTAATGGAGCATCA
. : . : . : . : . : . :
JMSF033F20+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
JMFF025E21+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
JMFF045K01+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
JMFF025P15+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
JMFF035B16+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
JMSF041K24+ ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
____________________________________________________________
consensus ACTATAGAAAAGGCATTATGGGTCACCAGCCATGAGTACTTGTTGAAGGGTAACCCACTG
. : . : . : . : . : . :
JMSF033F20+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
JMFF025E21+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
JMFF045K01+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
JMFF025P15+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
JMFF035B16+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
JMSF041K24+ ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
____________________________________________________________
consensus ATAATGGAAGTGGGTACAGTGGCTTGTCCTCTTATGCAAAAAGGTTGATTCTTTCCCATT
. : . : . : . : . : . :
JMSF033F20+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
JMFF025E21+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
JMFF045K01+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
JMFF025P15+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
JMFF035B16+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
JMSF041K24+ ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
____________________________________________________________
consensus ACCGGGCAATTCCCGCAGTAAAGCCCAGCCCCACAGTCCGTGGCCGAAGCACACGAATCA
. : . : . : . : . : . :
JMSF033F20+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
JMFF025E21+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
JMFF045K01+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
JMFF025P15+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
JMFF035B16+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
JMSF041K24+ AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
____________________________________________________________
consensus AGAAGCTGGCAATTGCCGTTAAAGCAGGCGGCAGATGGGGCGATGAAGAAGACATCTGAG
. : . : . : . : . : . :
JMSF033F20+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
JMFF025E21+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
JMFF045K01+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
JMFF025P15+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
JMFF035B16+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
JMSF041K24+ AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
____________________________________________________________
consensus AGGATAAATGATAGGAGAAGAAGGTACCCTTTTGAAGAGGGACCTTGAGCTCCTCCGCAG
. : . : . : . : . : . :
JMSF033F20+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCC
JMFF025E21+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
JMFF045K01+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
JMFF025P15+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
JMFF035B16+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
JMSF041K24+ TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
____________________________________________________________
consensus TTGATTCTCCGGCGATTCTTCATGCTGAGAATGCGCTCCGCCGCGAAACCCCGACACAGA
. : . : . : . : . : . :
JMFF025E21+ TTAAATCACAAAAT
JMFF045K01+ TTAAATCACAAAAT
JMFF025P15+ TTAAATCACAAAAT
JMFF035B16+ TTAAATCACAAAAT
JMSF041K24+ TTAAATCACAAAATGAGAAAAGATTCTACGACATAGTCATAGTATTTATAGGAGCAGCCT
____________________________________________________________
consensus TTAAATCACAAAATGAGAAAAGATTCTACGACATAGTCATAGTATTTATAGGAGCAGCCT
. : . : . : . : . : . :
JMSF041K24+ TAAATCCCTTAATTATTAAGTTTATAAGTAAAAGAAGTGTCGCATGATGAAGCAGATAGG
____________________________________________________________
consensus TAAATCCCTTAATTATTAAGTTTATAAGTAAAAGAAGTGTCGCATGATGAAGCAGATAGG
. : . : . : . : . : . :
JMSF041K24+ GAAAGCAAAAGATGAGTGTAACTGAGAAAGAGAGAGAGAGAGAGATAGAGGGAGCAGAAG
____________________________________________________________
consensus GAAAGCAAAAGATGAGTGTAACTGAGAAAGAGAGAGAGAGAGAGATAGAGGGAGCAGAAG
. : . : . : . : . : . :
JMSF041K24+ ATGCCAATTTTCGTGTTCCTTTACCTCTCCCAGCAACTACTTTACTTTTTTACGCCATTC
____________________________________________________________
consensus ATGCCAATTTTCGTGTTCCTTTACCTCTCCCAGCAACTACTTTACTTTTTTACGCCATTC