Contig 005244:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041A02+                                                      GAAAAGCTCTTCACTC
JMSF041A02-                                                       GAAAAGCTCTTCACTC
                      ____________________________________________________________
consensus                                                         GAAAAGCTCTTCACTC
 
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rJMSF041A02+          CGTCTTCTTCTCCCTCTGCGCGCCTGTCGAAAATCGAGATGGCGTCAACGAGTGCTCTCA
JMSF041A02-           CGTCTTCTTCTCCCTCTGCGCGCCTGTCGAAAATCGAGATGGCGTCAACGAGTGCTCTCA
                      ____________________________________________________________
consensus             CGTCTTCTTCTCCCTCTGCGCGCCTGTCGAAAATCGAGATGGCGTCAACGAGTGCTCTCA
 
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rJMSF041A02+          CCGCTGGGATTTCAAATCTCCAACGCTCTTCACTCTCATTCTACAAACCTATTCCCAACA
JMSF041A02-           CCGCTGGGATTTCAAATCTCCAACGCTCTTCACTCTCATTCTACAAACCTATTCCCAACA
                      ____________________________________________________________
consensus             CCGCTGGGATTTCAAATCTCCAACGCTCTTCACTCTCATTCTACAAACCTATTCCCAACA
 
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rJMSF041A02+          CAAATCAAGTAGGTGTCCTGACGCAATCACAAGTTGGTTTTACAAAGGTTGTAGACAAGC
JMSF041A02-           CAAATCAAGTAGGTGTCCTGACGCAATCACAAGTTGGTTTTACAAAGGTTGTAGACAAGC
                      ____________________________________________________________
consensus             CAAATCAAGTAGGTGTCCTGACGCAATCACAAGTTGGTTTTACAAAGGTTGTAGACAAGC
 
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rJMSF041A02+          ATAGACCTCTTAGAATCTATGCACTATTTGGAGGAAAGAAGGATAATAATGACAAGAGCA
JMSF041A02-           ATAGACCTCTTAGAATCTATGCACTATTTGGAGGAAAGAAGGATAATAATGACAAGAGCA
                      ____________________________________________________________
consensus             ATAGACCTCTTAGAATCTATGCACTATTTGGAGGAAAGAAGGATAATAATGACAAGAGCA
 
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rJMSF041A02+          ATGATGCTTCTTCTAAGGCAGGTATTTTGGGGAACATGCAAAATTTATACGAGACCGTGA
JMSF041A02-           ATGATGCTTCTTCTAAGGCAGGTATTTTGGGGAACATGCAAAATTTATACGAGACCGTGA
                      ____________________________________________________________
consensus             ATGATGCTTCTTCTAAGGCAGGTATTTTGGGGAACATGCAAAATTTATACGAGACCGTGA
 
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rJMSF041A02+          AGAAAGCACAAATGGTTGTCCAAGTTGAAGCTGTTAAAGTACAAAAAGAACTTGCTGCAG
JMSF041A02-           AGAAAGCACAAATGGTTGTCCAAGTTGAAGCTGTTAAAGTACAAAAAGAACTTGCTGCAG
                      ____________________________________________________________
consensus             AGAAAGCACAAATGGTTGTCCAAGTTGAAGCTGTTAAAGTACAAAAAGAACTTGCTGCAG
 
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rJMSF041A02+          CAGAGTTTGATGGTTACTGTGAAGGCGAGCTAATCAAGGTAACATTATCCGGTAATCAAC
JMSF041A02-           CAGAGTTTGATGGTTACTGTGAAGGCGAGCTAATCAAGGTAACATTATCCGGTAATCAAC
                      ____________________________________________________________
consensus             CAGAGTTTGATGGTTACTGTGAAGGCGAGCTAATCAAGGTAACATTATCCGGTAATCAAC
 
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rJMSF041A02+          AACCCATACGCACTGAGATAACAGAAGCTGCTATGGAATTGGGAGCAGAAAAACTCTCGC
JMSF041A02-           AACCCATACGCACTGAGATAACAGAAGCTGCTATGGAATTGGGAGCAGAAAAACTCTCGC
                      ____________________________________________________________
consensus             AACCCATACGCACTGAGATAACAGAAGCTGCTATGGAATTGGGAGCAGAAAAACTCTCGC
 
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rJMSF041A02+          TTCTGATTAATGAGGCATACAAGGATGCACATCAAAAGAGTGTCCAAGCCATGAAAGAGA
JMSF041A02-           TTCTGATTAATGAGGCATACAAGGATGCACATCAAAAGAGTGTCCAAGCCATGAAAGAGA
                      ____________________________________________________________
consensus             TTCTGATTAATGAGGCATACAAGGATGCACATCAAAAGAGTGTCCAAGCCATGAAAGAGA
 
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rJMSF041A02+          GGATGAGTGATCTTGCCCAAAGCTTGGGGATGCCACAGGGTCTAGGTGAAGGATTCAAGC
JMSF041A02-           GGATGAGTGATCTTGCCCAAAGCTTGGGGATGCCACAGGGTCTAGGTGAAGGATTCAAGC
                      ____________________________________________________________
consensus             GGATGAGTGATCTTGCCCAAAGCTTGGGGATGCCACAGGGTCTAGGTGAAGGATTCAAGC
 
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rJMSF041A02+          AATGATATCTCTCTAGTTCTTTAGAATGTTTGAGGCAAAATGTACTGTGATGGTCTTGTG
JMSF041A02-           AATGATATCTCTCTAGTTCTTTAGAATGTTTGAGGCAAAATGTACTGTGATGGTCTTGTG
                      ____________________________________________________________
consensus             AATGATATCTCTCTAGTTCTTTAGAATGTTTGAGGCAAAATGTACTGTGATGGTCTTGTG
 
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rJMSF041A02+          AAC                                                         
JMSF041A02-           AACATGTTTTTGTTCAATCTTTAATTTCTGTTATAAATACCAGTGTGATATTCTTTTTCC
                      ____________________________________________________________
consensus             AACATGTTTTTGTTCAATCTTTAATTTCTGTTATAAATACCAGTGTGATATTCTTTTTCC