Contig 005239:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040G13+                                   GACTTTGTTTTAGTAGATAGGGTGGGGATTCCATG
JMSF040G13-                                    GACTTTGTTTTAGTAGATAGGGTGGGGATTCCATG
                      ____________________________________________________________
consensus                                      GACTTTGTTTTAGTAGATAGGGTGGGGATTCCATG
 
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rJMSF040G13+          GCTGCTATTTCAGCTACCTGTTTCAGACTCCAAACTTCAGTAAAACAGCCTTCCAAGACT
JMSF040G13-           GCTGCTATTTCAGCTACCTGTTTCAGACTCCAAACTTCAGTAAAACAGCCTTCCAAGACT
                      ____________________________________________________________
consensus             GCTGCTATTTCAGCTACCTGTTTCAGACTCCAAACTTCAGTAAAACAGCCTTCCAAGACT
 
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rJMSF040G13+          ATCCAGATAGAGGGAAGAAGTACTGCAAGGTTGAATTTGGTATGTGTAGGTAAAACAAGG
JMSF040G13-           ATCCAGATAGAGGGAAGAAGTACTGCAAGGTTGAATTTGGTATGTGTAGGTAAAACAAGG
                      ____________________________________________________________
consensus             ATCCAGATAGAGGGAAGAAGTACTGCAAGGTTGAATTTGGTATGTGTAGGTAAAACAAGG
 
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rJMSF040G13+          ACTGGTTTCCCTTCCTTGACAACAACCCGCCGCTTCCACGTCTGTTGTGCGGCCAAAACA
JMSF040G13-           ACTGGTTTCCCTTCCTTGACAACAACCCGCCGCTTCCACGTCTGTTGTGCGGCCAAAACA
                      ____________________________________________________________
consensus             ACTGGTTTCCCTTCCTTGACAACAACCCGCCGCTTCCACGTCTGTTGTGCGGCCAAAACA
 
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rJMSF040G13+          GAGACAGTGCAGAAAGTGTGTGACATTGTGAGGAAGCAACTAGCATTGCCTGCCGAGACT
JMSF040G13-           GAGACAGTGCAGAAAGTGTGTGACATTGTGAGGAAGCAACTAGCATTGCCTGCCGAGACT
                      ____________________________________________________________
consensus             GAGACAGTGCAGAAAGTGTGTGACATTGTGAGGAAGCAACTAGCATTGCCTGCCGAGACT
 
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rJMSF040G13+          GATGTCACGCCTCAAACCAAGTTTGCAGAGCTCGGTGCCGATTCCTTAGACACAGTGGAG
JMSF040G13-           GATGTCACGCCTCAAACCAAGTTTGCAGAGCTCGGTGCCGATTCCTTAGACACAGTGGAG
                      ____________________________________________________________
consensus             GATGTCACGCCTCAAACCAAGTTTGCAGAGCTCGGTGCCGATTCCTTAGACACAGTGGAG
 
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rJMSF040G13+          ATTGTGATGTGTATTGAGGAAGAGTTCGGGATAAGCGTGGAAGAACAGAACGCGGAGAGC
JMSF040G13-           ATTGTGATGTGTATTGAGGAAGAGTTCGGGATAAGCGTGGAAGAACAGAACGCGGAGAGC
                      ____________________________________________________________
consensus             ATTGTGATGTGTATTGAGGAAGAGTTCGGGATAAGCGTGGAAGAACAGAACGCGGAGAGC
 
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rJMSF040G13+          ATAACCTCTGTCCAGGAAGCTGCAGAGCTGATAGACAAACTTGTGAACAAACCGGAAGCT
JMSF040G13-           ATAACCTCTGTCCAGGAAGCTGCAGAGCTGATAGACAAACTTGTGAACAAACCGGAAGCT
                      ____________________________________________________________
consensus             ATAACCTCTGTCCAGGAAGCTGCAGAGCTGATAGACAAACTTGTGAACAAACCGGAAGCT
 
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rJMSF040G13+          TAGAAATTAAGATAAGATGCCATAAGTTATGTGTTTGGGTTTAATTTAGTAATGTGAGGT
JMSF040G13-           TAGAAATTAAGATAAGATGCCATAAGTTATGTGTTTGGGTTTAATTTAGTAATGTGAGGT
                      ____________________________________________________________
consensus             TAGAAATTAAGATAAGATGCCATAAGTTATGTGTTTGGGTTTAATTTAGTAATGTGAGGT
 
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rJMSF040G13+          AGGATCATTTGTTTGGTTGTGTCTCCATGAATTGTGTAATGCGGATTTTGAGTTTTTTGA
JMSF040G13-           AGGATCATTTGTTTGGTTGTGTCTCCATGAATTGTGTAATGCGGATTTTGAGTTTTTTGA
                      ____________________________________________________________
consensus             AGGATCATTTGTTTGGTTGTGTCTCCATGAATTGTGTAATGCGGATTTTGAGTTTTTTGA
 
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rJMSF040G13+          AAAATT                                                      
JMSF040G13-           AAAATTGAATTCATTTCATGATTGATGATATCTGTCTAGAGTTATTCTTCAAAAAAAAAA
                      ____________________________________________________________
consensus             AAAATTGAATTCATTTCATGATTGATGATATCTGTCTAGAGTTATTCTTCAAAAAAAAAA