Contig 005238:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023A10Sequence717005238 (2)ref|XP_009618887.1|2e-24PREDICTED: uncharacterized protein LOC104111001 isoform X2 [Nicotiana tomentosi751012615 (2)ref|XP_009618887.1|5e-27PREDICTED: uncharacterized protein LOC104111001 isoform X2 [Nicotiana tomentosi
JMSF040F24Sequence659005238 (2)ref|XP_009618882.1|6e-24PREDICTED: uncharacterized protein LOC104111001 isoform X1 [Nicotiana tomentosi794012615 (2)ref|XP_009618887.1|3e-27PREDICTED: uncharacterized protein LOC104111001 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF023A10+             TTCAGCATTNGGCGACTGTTTGNAGCCTCATCAGTTAANTGGGGGCTCGTTGTTGTCC
                      ____________________________________________________________
consensus               TTCAGCATTNGGCGACTGTTTGNAGCCTCATCAGTTAANTGGGGGCTCGTTGTTGTCC
 
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JMSF023A10+           TAATCTCTGTTCCCATTTCCAAAACATTAATTGAAGGCACAGAACTCTCTACTTCAGGTG
JMSF040F24+            AATCTCTGTTCCCATTTCCAAAACATTAATTGAAGGCACAGAACTCTCTACTTCAGGTG
                      ____________________________________________________________
consensus             TAATCTCTGTTCCCATTTCCAAAACATTAATTGAAGGCACAGAACTCTCTACTTCAGGTG
 
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JMSF023A10+           ATGGCAATGATTTTCC-TTCTGGCAGTTCATTATTGCATCCAGTTTTACATACACTTGTG
JMSF040F24+           ATGGCAATGATTTTCCTTTCTGGCAGTTCATTATTGCATCCAGTTTTACATACACTTGTG
                      ____________________________________________________________
consensus             ATGGCAATGATTTTCCTTTCTGGCAGTTCATTATTGCATCCAGTTTTACATACACTTGTG
 
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JMSF023A10+           TCTGGAAGCATAGCAGCCAGAGCATACAAAGTTTCAGCCACTTCTTGCTCATCTTCGGTG
JMSF040F24+           TCTGGAAGCATAGCAGCCAGAGCATACAAAGTTTCAGCCACTTCTTGCTCATCTTCGGTG
                      ____________________________________________________________
consensus             TCTGGAAGCATAGCAGCCAGAGCATACAAAGTTTCAGCCACTTCTTGCTCATCTTCGGTG
 
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JMSF023A10+           ATTGATCCCAAAACCTCCTTATTTATACACCTATCTAGGACATCCTGAGTTGTATCCAAA
JMSF040F24+           ATTGATCCCAAAACCTCCTTATTTATACACCTATCTAGGACATCCTGAGTTGTATCCAAA
                      ____________________________________________________________
consensus             ATTGATCCCAAAACCTCCTTATTTATACACCTATCTAGGACATCCTGAGTTGTATCCAAA
 
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JMSF023A10+           TTCATTTTGGATTTCTTCGCATCTTTCTTAAGCCTTCCAACTCCATTAGACACTTGGTTC
JMSF040F24+           TTCATTTTGGATTTCTTCGCATCTTTCTTAAGCCTTCCAACTCCATTAGACACTTGGTTC
                      ____________________________________________________________
consensus             TTCATTTTGGATTTCTTCGCATCTTTCTTAAGCCTTCCAACTCCATTAGACACTTGGTTC
 
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JMSF023A10+           AACTTCGGGTTCCCAAGAAAAGGCGACACTTGGTTCAACTTCGGGTTCCCAAAAGAAGGT
JMSF040F24+           AACTTCGGGTTCCCAAGAAAAGGCGACACTTGGTTCAACTTCGGGTTCCCAAAAGAAGGT
                      ____________________________________________________________
consensus             AACTTCGGGTTCCCAAGAAAAGGCGACACTTGGTTCAACTTCGGGTTCCCAAAAGAAGGT
 
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JMSF023A10+           GATGAAATGGATTCGTGATTTCTCTTCTTAATGGCTGAACGCAATTTTCGAGGAACAGGG
JMSF040F24+           GATGAAATGGATTCGTGATTTCTCTTCTTAATGGCTGAACGCAATTTTCGAGGAACAGGG
                      ____________________________________________________________
consensus             GATGAAATGGATTCGTGATTTCTCTTCTTAATGGCTGAACGCAATTTTCGAGGAACAGGG
 
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JMSF023A10+           GCATGGTTTACTGTATTACATCCTCCAGAAAACTTTCTGGGAAGCTTCAATCTCTTACTA
JMSF040F24+           GCATGGTTTACTGTATTACATCCTCCAGAAAACTTTCTGGGAAGCTTCAATCTCTTACTA
                      ____________________________________________________________
consensus             GCATGGTTTACTGTATTACATCCTCCAGAAAACTTTCTGGGAAGCTTCAATCTCTTACTA
 
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JMSF023A10+           TGATTACCATCTCCAGGCTGAAGCTCATCTTCACCTCCAGACTCAAAGCAGCCCATTTTG
JMSF040F24+           TGATTACCATCTCCAGGCTGAAGCTCATCTTCACCTCCAGACTCAAAGCAGCCCATTTTG
                      ____________________________________________________________
consensus             TGATTACCATCTCCAGGCTGAAGCTCATCTTCACCTCCAGACTCAAAGCAGCCCATTTTG
 
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JMSF023A10+           CTCACTCAAACTCAACTCCTCAACAACAGTCACTATTCATTCTTCCATTTTTCTACTCTA
JMSF040F24+           CTCACTCAAACTCAACTCCTCAACAACAGTCACTATTCATTCTTCCATTTTTCTACTCTA
                      ____________________________________________________________
consensus             CTCACTCAAACTCAACTCCTCAACAACAGTCACTATTCATTCTTCCATTTTTCTACTCTA
 
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JMSF023A10+           AGAAAACCACTCCAGAAGTACTTTCTTCAAAAAAAATTCCCAGAAGTCACTTAATGTA  
JMSF040F24+           AGAAAACCACTCCAGAAGTACTTTCTTCAAAAAAAATTCCCAGAAGTCACTTAATGTATC
                      ____________________________________________________________
consensus             AGAAAACCACTCCAGAAGTACTTTCTTCAAAAAAAATTCCCAGAAGTCACTTAATGTATC