Contig 005235:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F19Sequence531005235 (6)ref|XP_008379228.1|2e-24PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso702005235 (6)ref|XP_008379229.1|3e-89PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso
JMSF039P20Sequence669005235 (6)ref|XP_008379228.1|4e-40PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso805005235 (6)ref|XP_008379229.1|2e-121PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso
JMSF046L13Sequence857005235 (6)ref|XP_008379228.1|9e-96PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso781005235 (6)ref|XP_008379229.1|3e-107PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like iso

Alignment

This contig is upended


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rJMFF025F19-                                                     GAGTATTTGGATAGTAA
                      ____________________________________________________________
consensus                                                        GAGTATTTGGATAGTAA
 
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rJMFF025F19-          TAATTGAGTTCAATCATAGAATAAAAATAGTAACATGAACTATAAGTCCTACGCAAAATT
rJMSF046L13-                  TTCAATCATAGAATAAAAATAGTAACATGAACTATAAGTCCTACGCAAAATT
rJMSF039P20-                                          ACATGAACTATAAGTCCTACGCAAAATT
                      ____________________________________________________________
consensus             TAATTGAGTTCAATCATAGAATAAAAATAGTAACATGAACTATAAGTCCTACGCAAAATT
 
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rJMFF025F19-          TTTTCAATCTACAGTCTCTTGAATTGCAATAACTTTGTCACTAGATGGAGAGTTAATTAC
rJMSF046L13-          TTTTCAATCTACAGTCTCTTGAATTGCAATAACTTTGTCACTAGATGGAGAGTTAATTAC
rJMSF039P20-          TTTTCAATCTACAGTCTCTTGAATTGCAATAACTTTGTCACTAGATGGAGAGTTAATTAC
                      ____________________________________________________________
consensus             TTTTCAATCTACAGTCTCTTGAATTGCAATAACTTTGTCACTAGATGGAGAGTTAATTAC
 
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rJMFF025F19-          AACCCAACTTGCTGACTTGTCTATCACGCGATTTTTGGCTTTAGTCTCTTCGCTCTTGAA
rJMSF046L13-          AACCCAACTTGCTGACTTGTCTATCACGCGATTTTTGGCTTTAGTCTCTTCGCTCTTGAA
rJMSF039P20-          AACCCAACTTGCTGACTTGTCTATCACGCGATTTTTGGCTTTAGTCTCTTCGCTCTTGAA
                      ____________________________________________________________
consensus             AACCCAACTTGCTGACTTGTCTATCACGCGATTTTTGGCTTTAGTCTCTTCGCTCTTGAA
 
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rJMFF025F19-          TAAAGGAATACTCCAACAAGAGCAATGGTTGTTCCCAGAGAGTTTATTGGTGAAACAGGA
rJMSF046L13-          TAAAGGAATACTCCAACAAGAGCAATGGTTGTTCCCAGAGAGTTTATTGGTGAAACAGGA
rJMSF039P20-          TAAAGGAATACTCCAACAAGAGCAATGGTTGTTCCCAGAGAGTTTATTGGTGAAACAGGA
                      ____________________________________________________________
consensus             TAAAGGAATACTCCAACAAGAGCAATGGTTGTTCCCAGAGAGTTTATTGGTGAAACAGGA
 
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rJMFF025F19-          GTGTGGAAGAATATGACTGATGATACAATGACCACCACTCTCTTAACACAGTTCCCCACT
rJMSF046L13-          GTGTGGAAGAATATGACTGATGATACAATGACCACCACTCTCTTAACACAGTTCCCCACT
rJMSF039P20-          GTGTGGAAGAATATGACTGATGATACAATGACCACCACTCTCTTAACACAGTTCCCCACT
                      ____________________________________________________________
consensus             GTGTGGAAGAATATGACTGATGATACAATGACCACCACTCTCTTAACACAGTTCCCCACT
 
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rJMFF025F19-          GCATGGCTCACTGGGGAAACCATTTGTAGTATCATGTATGAAACCTGTTGGTAAGAGTGG
rJMSF046L13-          GCATGGCTCACTGGGGAAACCATTTGTAGTATCATGTATGAAACCTGTTGGTAAGAGTGG
rJMSF039P20-          GCATGGCTCACTGGGGAAACCATTTGTAGTATCATGTATGAAACCTGTTGGTAAGAGTGG
                      ____________________________________________________________
consensus             GCATGGCTCACTGGGGAAACCATTTGTAGTATCATGTATGAAACCTGTTGGTAAGAGTGG
 
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rJMFF025F19-          AAGCAGAAACCAGCTAAGAGGGATCTCACCCACAAGTCCCTACCACTGAATCCTTGGCTT
rJMSF046L13-          AAGCAGAAACCAGCTAAGAGGGATCTCACCCACAAGTCCCTACCACTGAATCCTTGGCTT
rJMSF039P20-          AAGCAGAAACCAGCTAAGAGGGATCTCACCCACAAGTCCCTACCACTGAATCCTTGGCTT
                      ____________________________________________________________
consensus             AAGCAGAAACCAGCTAAGAGGGATCTCACCCACAAGTCCCTACCACTGAATCCTTGGCTT
 
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rJMFF025F19-          GCAGCATATTGTAGATTGGATGGAGTGAATCTGGCACCTTCCATCAAAACTGCAAAGCTT
rJMSF046L13-          GCAGCATATTGTAGATTGGATGGAGTGAATCTGGCACCTTCCATCAAAACTGCAAAGCTT
rJMSF039P20-          GCAGCATATTGTAGATTGGATGGAGTGAATCTGGCACCTTCCATCAAAACTGCAAAGCTT
                      ____________________________________________________________
consensus             GCAGCATATTGTAGATTGGATGGAGTGAATCTGGCACCTTCCATCAAAACTGCAAAGCTT
 
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rJMFF025F19-          GTCAAAAGGATGAATGAAATGATGGTCATGACTGAGAAGAGGTTTATATTGTCAAGAGCT
rJMSF046L13-          GTCAAAAGGATGAATGAAATGATGGTCATGACTGAGAAGAGGTTTATATTGTCAAGAGCT
rJMSF039P20-          GTCAAAAGGATGAATGAAATGATGGTCATGACTGAGAAGAGGTTTATATTGTCAAGAGCT
                      ____________________________________________________________
consensus             GTCAAAAGGATGAATGAAATGATGGTCATGACTGAGAAGAGGTTTATATTGTCAAGAGCT
 
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rJMFF025F19-          TCCTCCTCCTTAAGCATGAAGGTTTTGCTAAACACGTTACGAGATTGGTTAGTGAGATTG
rJMSF046L13-          TCCTCCTCCTTAAGCATGAAGGTTTTGCTAAACACGTTACGAGATTGGTTAGTGAGATTG
rJMSF039P20-          TCCTCCTCCTTAAGCATGAAGGTTTTGCTAAACACGTTACGAGATTGGTTAGTGAGATTG
JMSF046L13+                                             CGTTACGAGATTGGTTAGTGAGATTG
                      ____________________________________________________________
consensus             TCCTCCTCCTTAAGCATGAAGGTTTTGCTAAACACGTTACGAGATTGGTTAGTGAGATTG
 
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rJMFF025F19-          GATGCCATTGCGCTGCCAAAGCCTATCCAGTTAAAAGAAGCCTCAGAGAATGAAGCCAAG
rJMSF046L13-          GATGCCATTGCGCTGCCAAAGCCTATCCAGTTAAAAGAAGCCTCAGAGAATGAAGCCAAG
rJMSF039P20-          GATGCCATTGCGCTGCCAAAGCCTATCCAGTTAAAAGAAGCCTCAGAGAATGAAGCCAAG
JMSF046L13+           GATGCCATTGCGCTGCCAAAGCCTATCCAGTTAAAAGAAGCCTCAGAGAATGAAGCCAAG
                      ____________________________________________________________
consensus             GATGCCATTGCGCTGCCAAAGCCTATCCAGTTAAAAGAAGCCTCAGAGAATGAAGCCAAG
 
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rJMFF025F19-          GCCACTCCACCAACAATGGGAACTA                                   
rJMSF046L13-          GCCACTCCACCAACAATGGGAACTAGGGACAATACCACCCACAGAGATGGCCACTGACCA
rJMSF039P20-          GCCACTCCACCAACAATGGGAACTAGGGACAATACCACCCACAGAGATGGCCACTGACCA
JMSF046L13+           GCCACTCCACCAACAATGGGAACTAGGGACAATACCACCCACAGAGATGGCCACTGACCA
                      ____________________________________________________________
consensus             GCCACTCCACCAACAATGGGAACTAGGGACAATACCACCCACAGAGATGGCCACTGACCA
 
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rJMSF046L13-          AGAAGTGCAGCAGAGAGAAGAACAGTAAAGAAAGGTTCCATTGCTTTAATTGTGTGAGT 
rJMSF039P20-          AGAAGTGCAGCAGAGAGAAGAACAGTAAAGAAAGGTTCCATTGCTTTAATTGTGTGAGTG
JMSF046L13+           AGAAGTGCAGCAGAGAGAAGAACAGTAAAGAAAGGTTCCATTGCTTTAATTGTGTGAGTG
                      ____________________________________________________________
consensus             AGAAGTGCAGCAGAGAGAAGAACAGTAAAGAAAGGTTCCATTGCTTTAATTGTGTGAGTG
 
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rJMSF039P20-          AAGGAGACTGCAACTTTACCAAGACTGATGTTTGTTAGAAGGTTGCCCATTGTATGC   
JMSF046L13+           AAGGAGACTGCAACTTTACCAAGACTGATGTTTGTTAGAAGGTTGCCCATTGTATGCAAA
JMSF039P20+                                                              GTATGCAAA
                      ____________________________________________________________
consensus             AAGGAGACTGCAACTTTACCAAGACTGATGTTTGTTAGAAGGTTGCCCATTGTATGCAAA
 
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JMSF046L13+           GCTGCCAGTGAAAAGATTGCTGCAAACTGAGATCTACGGATATTTGGTTTAGGGTGGAGA
JMSF039P20+           GCTGCCAGTGAAAAGATTGCTGCAAACTGAGATCTACGGATATTTGGTTTAGGGTGGAGA
                      ____________________________________________________________
consensus             GCTGCCAGTGAAAAGATTGCTGCAAACTGAGATCTACGGATATTTGGTTTAGGGTGGAGA
 
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JMSF046L13+           TTGAAAGCCCACATGAGGAAAACCATCAGCGTCCCACACCCAAATTGGAAAGCTGTAATG
JMFF025F19+                                         GTCCCACACCCAAATTGGAAAGCTGTAATG
JMSF039P20+           TTGAAAGCCCACATGAGGAAAACCATCAGCGTCCCACACCCAAATTGGAAAGCTGTAATG
                      ____________________________________________________________
consensus             TTGAAAGCCCACATGAGGAAAACCATCAGCGTCCCACACCCAAATTGGAAAGCTGTAATG
 
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JMSF046L13+           GTTGCTGGGAATGGGTACGCCTTCAAAACCTGTTTGTTGAGAATGTTGTAGTAGATATTC
JMFF025F19+           GTTGCTGGGAATGGGTACGCCTTCAAAACCTGTTTGTTGAGAATGTTGTAGTAGATATTC
JMSF039P20+           GTTGCTGGGAATGGGTACGCCTTCAAAACCTGTTTGTTGAGAATGTTGTAGTAGATATTC
                      ____________________________________________________________
consensus             GTTGCTGGGAATGGGTACGCCTTCAAAACCTGTTTGTTGAGAATGTTGTAGTAGATATTC
 
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JMSF046L13+           AAGAGATACCAGATTCCAAACATGGCGCCCAGCTGCAGAGTCTTAATAAATTCACTCGCC
JMFF025F19+           AAGAGATACCAGATTCCAAACATGGCGCCCAGCTGCAGAGTCTTAATAAATTCACTCGCC
JMSF039P20+           AAGAGATACCAGATTCCAAACATGGCGCCCAGCTGCAGAGTCTTAATAAATTCACTCGCC
                      ____________________________________________________________
consensus             AAGAGATACCAGATTCCAAACATGGCGCCCAGCTGCAGAGTCTTAATAAATTCACTCGCC
 
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JMSF046L13+           GCCGGCTTCTCTGCCCTAAACCCTTCCGCATTTTCCGGAACTGCGGCGGCGCCGCCACCG
JMFF025F19+           GCCGGCTTCTCTGCCCTAAACCCTTCCGCATTTTCCGGAACTGCGGCGGCGCCGCCACCG
JMSF039P20+           GCCGGCTTCTCTGCCCTAAACCCTTCCGCATTTTCCGGAACTGCGGCGGCGCCGCCACCG
                      ____________________________________________________________
consensus             GCCGGCTTCTCTGCCCTAAACCCTTCCGCATTTTCCGGAACTGCGGCGGCGCCGCCACCG
 
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JMSF046L13+           CCGCCCTTCAAGTGCAGTAGAGAATGTGGTTTTGCGTTGCCGGTGGTGAAGCCATTGAAG
JMFF025F19+           CCGCCCTTCAAGTGCAGTAGAGAATGTGGTTTTGCGTTGCCGGTGGTGAAGCCATTGAAG
JMSF039P20+           CCGCCCTTCAAGTGCAGTAGAGAATGTGGTTTTGCGTTGCCGGTGGTGAAGCCATTGAAG
                      ____________________________________________________________
consensus             CCGCCCTTCAAGTGCAGTAGAGAATGTGGTTTTGCGTTGCCGGTGGTGAAGCCATTGAAG
 
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JMSF046L13+           CTGGAGAATAAACGCAGGCATGTGGGTTTGTGTAGCCAGTGAATTGATGATTTCTGAAAA
JMFF025F19+           CTGGAGAATAAACGCAGGCATGTGGGTTTGTGTAGCCAGTGAATTGATGATTTCTGAAAA
JMSF039P20+           CTGGAGAATAAACGCAGGCATGTGGGTTTGTGTAGCCAGTGAATTGATGATTTCTGAAAA
                      ____________________________________________________________
consensus             CTGGAGAATAAACGCAGGCATGTGGGTTTGTGTAGCCAGTGAATTGATGATTTCTGAAAA
 
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JMSF046L13+           GCCTCCTGCTTCAAACCTAATATACTGAACCTACAAGATTGGTTTTTGAAGAGGTGAGGA
JMFF025F19+           GCCTCCTGCTTCAAACCTAATATACTGAACCTACAAGATTGGTTTTTGAAGAGGTGAGGA
JMSF039P20+           GCCTCCTGCTTCAAACCTAATATACTGAACCTACAAGATTGGTTTTTGAAGAGGTGAGGA
                      ____________________________________________________________
consensus             GCCTCCTGCTTCAAACCTAATATACTGAACCTACAAGATTGGTTTTTGAAGAGGTGAGGA
 
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JMSF046L13+           GACCTCTGAAACTGTGTAGACAAGGGAGATAGAGCCAATGCATAACTTTCCATGTTTTAG
JMFF025F19+           GACCTCTGAAACTGTGTAGACAAGGGAGATAGAGCCAATGCATAACTTTCCATGTTTTAG
JMSF039P20+           GACCTCTGAAACTGTGTAGACAAGGGAGATAGAGCCAATGCATAACTTTCCATGTTTTAG
                      ____________________________________________________________
consensus             GACCTCTGAAACTGTGTAGACAAGGGAGATAGAGCCAATGCATAACTTTCCATGTTTTAG
 
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JMSF046L13+           GCTGCAGCGACCATGTTTTGGGCAGAGGAGAACTGAGAAGAATGAATTA           
JMFF025F19+           GCTGCAGCGACCATGTTTTGGGCAGAGGAGAACTGAGAAGAATGAATTACAACAAATCAG
JMSF039P20+           GCTGCAGCGACCATGTTTTGGGCAGAGGAGAACTGAGAAGAATGAATTACAACAAATCAG
                      ____________________________________________________________
consensus             GCTGCAGCGACCATGTTTTGGGCAGAGGAGAACTGAGAAGAATGAATTACAACAAATCAG
 
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JMFF025F19+           TGGATGCCATTCACTATTGAT                                       
JMSF039P20+           TGGATGCCATTCACTACTGATAGGCAAGTTTTGTGGGGAGTTGAGAGTTGAGAGTTGGCC
                      ____________________________________________________________
consensus             TGGATGCCATTCACTATTGATAGGCAAGTTTTGTGGGGAGTTGAGAGTTGAGAGTTGGCC