| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026H06 | Sequence | 552 | 005234 (5) | ref|XP_002275990.1| | 6e-111 | PREDICTED: cysteine synthase [Vitis vinifera] ref|XP_002275940.1| PREDICTED: cys | |||||
| JMFN010M12 | Sequence | 627 | 005234 (5) | ref|XP_010024285.1| | 2e-121 | PREDICTED: cysteine synthase [Eucalyptus grandis] ref|XP_010024286.1| PREDICTED: | |||||
| JMFN031F08 | Sequence | 639 | 005234 (5) | ref|XP_010024285.1| | 2e-75 | PREDICTED: cysteine synthase [Eucalyptus grandis] ref|XP_010024286.1| PREDICTED: | |||||
| JMSF039N01 | Sequence | 591 | 005234 (5) | ref|XP_002512253.1| | 3e-70 | cysteine synthase, putative [Ricinus communis] gb|EEF49705.1| cysteine synthase, | 854 | 005234 (5) | ref|XP_010024285.1| | 1e-133 | PREDICTED: cysteine synthase [Eucalyptus grandis] ref|XP_010024286.1| PREDICTED: |
This contig is upended
. : . : . : . : . : . :
JMFN031F08+ AAAAGCATCATCTTATTTCAGACATTCCACAATATTCAAACAGTTG
rJMSF039N01- G
____________________________________________________________
consensus AAAAGCATCATCTTATTTCAGACATTCCACAATATTCAAACAGTTG
. : . : . : . : . : . :
JMFN031F08+ ACAGAATCTTGATCTGGAAAAGCACAATTTCTGTGATGTTTAATATAGTTAACCAACAAT
rJMSF039N01- ACAGAATCTTGATCTGGAAAAGCACAATTTCTGTGATGTTTAATATAGTTAACCAACAAT
____________________________________________________________
consensus ACAGAATCTTGATCTGGAAAAGCACAATTTCTGTGATGTTTAATATAGTTAACCAACAAT
. : . : . : . : . : . :
JMFN031F08+ TTGACTTGAATCCCCAGAAGAACTTCAAGACTCAAAGGTCATATTCTCAGCTTCATGCCT
rJMSF039N01- TTGACTTGAATCCCCAGAAGAACTTCAAGACTCAAAGGTCATATTCTCAGCTTCATGCCT
____________________________________________________________
consensus TTGACTTGAATCCCCAGAAGAACTTCAAGACTCAAAGGTCATATTCTCAGCTTCATGCCT
. : . : . : . : . : . :
JMFN031F08+ AATGGATTCAAAGAGCACAGAAGAAAGATAACGCTCTCCAAAGCTCGGGAAAACAACCAC
rJMSF039N01- AATGGATTCAAAGAGCACAGAAGAAAGATAACGCTCTCCAAAGCTCGGGAAAACAACCAC
____________________________________________________________
consensus AATGGATTCAAAGAGCACAGAAGAAAGATAACGCTCTCCAAAGCTCGGGAAAACAACCAC
. : . : . : . : . : . :
JMFN031F08+ AATGAGTTTCCCCGCATTCTCTGCCCGCTTTGCGAGTCTGATTGCAGCTGCTGCTGCTGC
rJMSF039N01- AATGAGTTTCCCCGCATTCTCTGCCCGCTTTGCGAGTCTGATTGCAGCTGCTGCTGCTGC
____________________________________________________________
consensus AATGAGTTTCCCCGCATTCTCTGCCCGCTTTGCGAGTCTGATTGCAGCTGCTGCTGCTGC
. : . : . : . : . : . :
JMFN031F08+ ACCAGATGATATTCCCGCAAGCAATCCCTCTTTCACTGCAAGCAGCTTTGCAGTTTCAAT
rJMSF039N01- ACCAGATGATATTCCCGCAAGCAATCCCTCTTTCACTGCAAGCAGCTTTGCAGTTTCAAT
JMFN010M12+ TTTCACTGCAAGCAGCTTTGCAGTTTCAAT
____________________________________________________________
consensus ACCAGATGATATTCCCGCAAGCAATCCCTCTTTCACTGCAAGCAGCTTTGCAGTTTCAAT
. : . : . : . : . : . :
JMFN031F08+ GGCTTCATCACTAGAGATTTGAATTACTTCATCCAGAAGATCAACTTCCAGCACTCCAGG
rJMSF039N01- GGCTTCATCACTAGAGATTTGAATTACTTCATCCAGAAGATCAACTTCCAGCACTCCAGG
JMFN010M12+ GGCTTCATCACTAGAGATNTGAATTACTTCATCCAGAAGATCAACTTCCAGCACTCCAGG
____________________________________________________________
consensus GGCTTCATCACTAGAGATTTGAATTACTTCATCCAGAAGATCAACTTCCAGCACTCCAGG
. : . : . : . : . : . :
JMFN031F08+ GATGAAACCGGCCCCGATTCCCTGGATCTTGTGTGGACCTGGCTTTCCTCCATTGAGAAT
rJMSF039N01- GATGAAACCGGCCCCGATTCCCTGGATCTTGTGTGGACCTGGCTTTCCTCCATTGAGAAT
JMFN010M12+ GATGAAACCGGCCCCGATTCCCTGGATCTTGTGTGGACCTGGCTTTCCTCCATTGAGAAT
____________________________________________________________
consensus GATGAAACCGGCCCCGATTCCCTGGATCTTGTGTGGACCTGGCTTTCCTCCATTGAGAAT
. : . : . : . : . : . :
JMFN031F08+ AGGACTCTCAACAGGTTCCACTCCATACAGCTTTATGTTGGCATTCTGTTCCCTAAGGAA
rJMSF039N01- AGGACTCTCAACAGGTTCCACTCCATACAGCTTTATGTTGGCATTCTGTTCCCTAAGGAA
JMFN010M12+ AGGACTCTCAACAGGTTCCACTCCATACAGCTTTATGTTGGCATTCTGTTCCCTAAGGAA
____________________________________________________________
consensus AGGACTCTCAACAGGTTCCACTCCATACAGCTTTATGTTGGCATTCTGTTCCCTAAGGAA
. : . : . : . : . : . :
JMFN031F08+ TCTGCCTGCACCAGTAACTGTGCCACCAGTGCCAATCCCAGAGACCAAAGCATCTATTTT
rJMSF039N01- TCTGCCTGCACCAGTAACTGTGCCACCAGTGCCAATCCCAGAGACCAAAGCATCTATTTT
JMFN010M12+ TCTGCCTGCACCAGTAACTGTGCCACCAGTGCCAATCCCAGAGACCAAAGCATCTATTTT
____________________________________________________________
consensus TCTGCCTGCACCAGTAACTGTGCCACCAGTGCCAATCCCAGAGACCAAAGCATCTATTTT
. : . : . : . : . : . :
JMFN031F08+ ACCATTTGAACCTTTCCAGATTTCAGGCCCAGTGGTTTCATAATGTATCTTTG
rJMSF039N01- ACCATTTGAACCTTTCCAGATTTCAGGCCCAGTGGTTTCATAATGTATCTTTGGGTTTGC
JMFN010M12+ ACCATTTGAACCTTTCCAGATTTCAGGCCCAGTGGTTTCATAATGTATCTTTGGGTTTGC
JMFF026H06+ CCAGTGGTTTCATAATGTATCTTTGGGTTTGC
____________________________________________________________
consensus ACCATTTGAACCTTTCCAGATTTCAGGCCCAGTGGTTTCATAATGTATCTTTGGGTTTGC
. : . : . : . : . : . :
rJMSF039N01- AGGGTTTTCGAATTGCTGAAGAATGTAGGCATTGGGTGTTTTGGCCAGAATCTCTTCAGC
JMFN010M12+ AGGGTTTTCGAATTGCTGAAGAATGTAGGCATTGGGTGTTTTGGCCAGAATCTCTTCAGC
JMFF026H06+ AGGGTTTTCGAATTGCTGAAGAATGTAGGCATTGGGTGTTTTGGCCAGAATCTCTTCAGC
JMSF039N01+ TCGAATTGCTGAAGAATGTAGGCATTGGGTGTTTTGGCCAGAATCTCTTCAGC
____________________________________________________________
consensus AGGGTTTTCGAATTGCTGAAGAATGTAGGCATTGGGTGTTTTGGCCAGAATCTCTTCAGC
. : . : . : . : . : . :
rJMSF039N01- CTTTTGTATGGCACCTTTCATTCCCTTTGCAGGGTCAGTGAGCACCAACTCAGCCCCGAA
JMFN010M12+ CTTTTGTATGGCACCTTTCATTCCCTTTGCAGGGTCAGTGAGCACCAACTCAGCCCCGAA
JMFF026H06+ CTTTTGTATGGCACCTTTCATTCCCTTTGCAGGGTCAGTGAGCACCAACTCAGCCCCGAA
JMSF039N01+ CTTTTGTATGGCACCTTTCATTCCCTTTGCAGGGTCAGTGAGCACCAACTCAGCCCCGAA
____________________________________________________________
consensus CTTTTGTATGGCACCTTTCATTCCCTTTGCAGGGTCAGTGAGCACCAACTCAGCCCCGAA
. : . : . : . : . : . :
rJMSF039N01- GGCACGGAGAAGAATCCTTCTTTCCAGACTCATGGAAGCAGGCATGGTGATGATAAGCTT
JMFN010M12+ GGCACGGAGAAGAATCCTTCTTTCCAGACTCATGGAAGCAGGCATGGTGATGATAAGCTT
JMFF026H06+ GGCACGGAGAAGAATCCTTCTTTCCAGACTCATGGAAGCAGGCATGGTGATGATAAGCTT
JMSF039N01+ GGCACGGAGAAGAATCCTTCTTTCCAGACTCATGGAAGCAGGCATGGTGATGATAAGCTT
____________________________________________________________
consensus GGCACGGAGAAGAATCCTTCTTTCCAGACTCATGGAAGCAGGCATGGTGATGATAAGCTT
. : . : . : . : . : . :
rJMSF039N01- GTAGCCCTTTGCAGCAGCCATGAATGCCAACCCAATCCCAGTGTTT
JMFN010M12+ GTAGCCCTTTGCAGCAGCCATGAATGCCAACCCAATCCCAGTGTTTCCACTTGTAGGTTC
JMFF026H06+ GTAGCCCTTTGCAGCAGCCATGAATGCCAACCCAATCCCAGTGTTTCCACTTGTAGGTTC
JMSF039N01+ GTAGCCCTTTGCAGCAGCCATGAATGCCAACCCAATCCCAGTGTTTCCACTTGTAGGTTC
____________________________________________________________
consensus GTAGCCCTTTGCAGCAGCCATGAATGCCAACCCAATCCCAGTGTTTCCACTTGTAGGTTC
. : . : . : . : . : . :
JMFN010M12+ AATGAGAACACTCTCTCCTGGTTTAATGAGTCCTTTCTCCTCAGCATC
JMFF026H06+ AATGAGAACACTCTCTCCTGGTTTAATGAGTCCTTTCTCCTCAGCATCTGTAATCATACT
JMSF039N01+ AATGAGAACACTCTCTCCTGGTTTAATGAGTCCTTT--CCTCAGCATCTGTAATCATACT
____________________________________________________________
consensus AATGAGAACACTCTCTCCTGGTTTAATGAGTCCTTTCTCCTCAGCATCTGTAATCATACT
. : . : . : . : . : . :
JMFF026H06+ ATAACCAATCCTATCCTTAACACTGGAGCATGGCTCCATCATTTCCAGCTTCGCTGTAAC
JMSF039N01+ ATAACCAATCCTATCCTTAACACTGGAGCATGGCTCCATCATTTCCAGCTTCGCTGCAAC
____________________________________________________________
consensus ATAACCAATCCTATCCTTAACACTGGAGCATGGCTCCATCATTTCCAGCTTCGCTGTAAC
. : . : . : . : . : . :
JMFF026H06+ TCGAGCAACACATCCATCAACAATATTGTTCAGGTATACCAATGGAGTTTTACCAATCAA
JMSF039N01+ TCGAGCAACACATCCATCAACAATATTGTTCAGGTATACCAATGGAGTTTTACCAATCAA
____________________________________________________________
consensus TCGAGCAACACATCCATCAACAATATTGTTCAGGTATACCAATGGAGTTTTACCAATCAA
. : . : . : . : . : . :
JMFF026H06+ TTCAGTAACATCCTTGGCAAT
JMSF039N01+ TTCAGTAACATCCTTGGCAATCCCAGTCCTTTCCTCTGCCATCTTTTCAGATCAAGTCTT
____________________________________________________________
consensus TTCAGTAACATCCTTGGCAATCCCAGTCCTTTCCTCTGCCATCTTTTCAGATCAAGTCTT
. : . : . : . : . : . :
JMSF039N01+ CTACTTTTGAGCTTTGACAATGATGAGAAGATAAATGAGATATTTGGGAATAATTAGATG
____________________________________________________________
consensus CTACTTTTGAGCTTTGACAATGATGAGAAGATAAATGAGATATTTGGGAATAATTAGATG
. : . : . : . : . : . :
JMSF039N01+ GGGGAGAAAATTTTGTATTATATAGGAAAAAGATTCCATAAAAGGATGATATCTACTATC
____________________________________________________________
consensus GGGGAGAAAATTTTGTATTATATAGGAAAAAGATTCCATAAAAGGATGATATCTACTATC