Contig 005231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026L13Sequence690005231 (2)ref|XP_010106391.1|2e-11hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p729008548 (3)ref|XP_002512268.1|7e-29S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] g
JMSF039C19Sequence720005231 (2)ref|XP_010106391.1|2e-11hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p800008548 (3)gb|AFK42953.1|8e-48unknown [Lotus japonicus]

Alignment

This contig is upended


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JMSF026L13+                                         AAGGAAGCCACCAATACAATGATCTAGATG
JMSF039C19+           CTGAGAGAAAANTTAGAATTCTCCTATAATAAGGAAGCCACCAATACAATGATCTAGATG
                      ____________________________________________________________
consensus             CTGAGAGAAAANTTAGAATTCTCCTATAATAAGGAAGCCACCAATACAATGATCTAGATG
 
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JMSF026L13+           AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
JMSF039C19+           AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
                      ____________________________________________________________
consensus             AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
 
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JMSF026L13+           ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
JMSF039C19+           ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
                      ____________________________________________________________
consensus             ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
 
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JMSF026L13+           TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
JMSF039C19+           TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
                      ____________________________________________________________
consensus             TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
 
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JMSF026L13+           ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
JMSF039C19+           ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
                      ____________________________________________________________
consensus             ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
 
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JMSF026L13+           TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
JMSF039C19+           TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
                      ____________________________________________________________
consensus             TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
 
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JMSF026L13+           ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGTA
JMSF039C19+           ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGCA
                      ____________________________________________________________
consensus             ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGTA
 
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JMSF026L13+           CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
JMSF039C19+           CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
                      ____________________________________________________________
consensus             CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
 
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JMSF026L13+           CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
JMSF039C19+           CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
                      ____________________________________________________________
consensus             CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
 
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JMSF026L13+           GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
JMSF039C19+           GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
                      ____________________________________________________________
consensus             GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
 
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JMSF026L13+           AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
JMSF039C19+           AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
                      ____________________________________________________________
consensus             AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
 
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JMSF026L13+           CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATC  
JMSF039C19+           CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATCTC
                      ____________________________________________________________
consensus             CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATCTC