Contig 005231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026L13Sequence690005231 (2)ref|XP_010106391.1|2e-11hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p729008548 (3)ref|XP_002512268.1|7e-29S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] g
JMSF039C19Sequence720005231 (2)ref|XP_010106391.1|2e-11hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p800008548 (3)gb|AFK42953.1|8e-48unknown [Lotus japonicus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026L13+ AAGGAAGCCACCAATACAATGATCTAGATG
JMSF039C19+ CTGAGAGAAAANTTAGAATTCTCCTATAATAAGGAAGCCACCAATACAATGATCTAGATG
                      ____________________________________________________________
consensus CTGAGAGAAAANTTAGAATTCTCCTATAATAAGGAAGCCACCAATACAATGATCTAGATG
 
. : . : . : . : . : . :
JMSF026L13+ AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
JMSF039C19+ AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
                      ____________________________________________________________
consensus AACTTACTGACCTATTAGCATATACTTAAGCATTTATAACTTGTTAATTAGCCACCAGAT
 
. : . : . : . : . : . :
JMSF026L13+ ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
JMSF039C19+ ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
                      ____________________________________________________________
consensus ATTCCCTAATTGATTCATTTACATAAAAATTAAAAGGCACTCTAAAATACTTCCTGTTTG
 
. : . : . : . : . : . :
JMSF026L13+ TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
JMSF039C19+ TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
                      ____________________________________________________________
consensus TGTGGCGTTAAAGATACTTACATATATGATGCTCAACAGTTCCGTAAATGATAAAATAGC
 
. : . : . : . : . : . :
JMSF026L13+ ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
JMSF039C19+ ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
                      ____________________________________________________________
consensus ACTTCATCTTTCAACAAAAATTATTCACTTTGCGAATAAGAAGATCAAACCTAACCAAAT
 
. : . : . : . : . : . :
JMSF026L13+ TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
JMSF039C19+ TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
                      ____________________________________________________________
consensus TATAACCTCACTCGTGTACTCAAATAAGCATAATATACGGACAGAAGGTTAAAGGGGCAT
 
. : . : . : . : . : . :
JMSF026L13+ ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGTA
JMSF039C19+ ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGCA
                      ____________________________________________________________
consensus ACTGAAGCAGATCCTGGAGCTGTTGTTGGCGTGTACGAGGGTTAATCCCTTTTCGGAGTA
 
. : . : . : . : . : . :
JMSF026L13+ CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
JMSF039C19+ CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
                      ____________________________________________________________
consensus CATTTTCTTTCATATGGAGCCCATTGGCCTCGATCTGCTCCCTCGCCCACTCAACATCCT
 
. : . : . : . : . : . :
JMSF026L13+ CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
JMSF039C19+ CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
                      ____________________________________________________________
consensus CCGCCGACGCCGAGATCCGCTCCCCCGGTCTGACAGCGCTAGAGGCGGCAGTGCGGTCAG
 
. : . : . : . : . : . :
JMSF026L13+ GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
JMSF039C19+ GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
                      ____________________________________________________________
consensus GCGCGGAAGGGCAAGAGCAATTCGAGGTAGATGAAGGTGAAGAAAGGGAGGAGAGGAGCA
 
. : . : . : . : . : . :
JMSF026L13+ AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
JMSF039C19+ AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
                      ____________________________________________________________
consensus AGAAGAAGAAGACGGCGGCTGCCGCGGCGGAGAGAACAAGCACCGGCACTGATATCACCA
 
. : . : . : . : . : . :
JMSF026L13+ CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATC
JMSF039C19+ CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATCTC
                      ____________________________________________________________
consensus CTCTCTTGGATGATGCCAGCAGAGCCATAGTCCATAGACCATAGTAGTGCTGATGATCTC