Contig 005230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038B17Sequence498005230 (3)gb|EYU19975.1|4e-26hypothetical protein MIMGU_mgv1a010541mg [Erythranthe guttata]
JMFF041C13Sequence659005230 (3)gb|EYU19975.1|1e-73hypothetical protein MIMGU_mgv1a010541mg [Erythranthe guttata]643004088 (3)emb|CAC93946.1|1e-04lacZ alpha peptide [Cloning vector pSET152] gb|ADB65775.1| lacZ alpha peptide [C
JMSF039A13Sequence653005230 (3)gb|EYU19975.1|3e-63hypothetical protein MIMGU_mgv1a010541mg [Erythranthe guttata]801002547 (3)ref|XP_011084966.1|2e-85PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 isoform X2

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+                                                 GTGACGTAAGTCAACCAAGCCT
                      ____________________________________________________________
consensus                                                   GTGACGTAAGTCAACCAAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           CTCTTTTGAAAGTCATCAAATACGCAAAGACGGCAGTGAAGAAGGGCGTGGTGGCGCCAA
                      ____________________________________________________________
consensus             CTCTTTTGAAAGTCATCAAATACGCAAAGACGGCAGTGAAGAAGGGCGTGGTGGCGCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           TGGCCTGGTTGAAGGAAACGGGCAAGTAGCGGAGCGAGATGTTGCCGCTGACGACGGAGG
JMSF039A13+                  GTTGAAGGAAACGGNCAAGTAGCGGAGCGAGATGTTGCCGCTGACGACGGAGG
                      ____________________________________________________________
consensus             TGGCCTGGTTGAAGGAAACGGGCAAGTAGCGGAGCGAGATGTTGCCGCTGACGACGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           CGCAAAACACGAGGCTCAACGCGGAGATCTTCATGAACTGAACCCTAGATCTTATAGTCT
JMSF039A13+           CGCAAAACACGAGGCTCAACGCGGAGATCTTCATGAACTGAACCCTAGATCTTATAGTCT
                      ____________________________________________________________
consensus             CGCAAAACACGAGGCTCAACGCGGAGATCTTCATGAACTGAACCCTAGATCTTATAGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           GCATAGGCACCATCTTCATCCAGGCAACGGCGATGTAGCTGAGCAGGGAGCAAGCCGTCA
JMFF038B17+                                                  TGAGCAGGGAGCAANCCNTCA
JMSF039A13+           GCATAGGCACCATCTTCATCCAGGCAATGGCGATGTAGCTGAGCAGGGAGCAAGCCGTCA
                      ____________________________________________________________
consensus             GCATAGGCACCATCTTCATCCAGGCAATGGCGATGTAGCTGAGCAGGGAGCAAGCCGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           TGTGGCACATCGTGAGAAAGATCGGGTATTTAAATCAGTAATTGCTCAGCAAGTACTTGT
JMFF038B17+           TGTGGCACATNGTGAGAAAGATCGGGTATTTAAATCCGTAATTGCTCAGCAAGTACTTGT
JMSF039A13+           TGTGGCACATCGTGAGAAAGATCGGGTATTTAAATCCGTAATTGCTCAGCAAGTACTTGT
                      ____________________________________________________________
consensus             TGTGGCACATCGTGAGAAAGATCGGGTATTTAAATCCGTAATTGCTCAGCAAGTACTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           TCAGCAGCAAAACCCCAATGTTGGAGGAGTACCACGACGCCACCAGCCCGATCGTGAAAA
JMFF038B17+           TCAGCAGCAAAACCCCAATGTTGGAGGAGTACCACGACGCCACCAGCCCGATCGTGAAAA
JMSF039A13+           TCAGCAGCAAAACCCCAATGTTGGAGGAGTACCACGACGCCACCAGCCCGATCGTGAAAA
                      ____________________________________________________________
consensus             TCAGCAGCAAAACCCCAATGTTGGAGGAGTACCACGACGCCACCAGCCCGATCGTGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           ACCGGCCCGTCGCCTTCATTGCCGACATTGGTCGATCTATCCGGAACCCCCAATTCCTCA
JMFF038B17+           ACCGGCCCGTCGCCTTCATTGCCGACATTGGTCGATCTATCCGGAACCCCCAATTCCTCA
JMSF039A13+           ACCGGCCCGTCGCCTTCATTGCCGACATTGGTCGATCTATCCGGAACCCCCAATTCCTCA
                      ____________________________________________________________
consensus             ACCGGCCCGTCGCCTTCATTGCCGACATTGGTCGATCTATCCGGAACCCCCAATTCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           AAATCCCCCCCAAAGAAACTACTAAATAAAACAACAACAACTACAACAACAACAACAACA
JMFF038B17+           AAATCCCCCCCAAAGAAACTACTAAATAAAACAACAACAACTACAACAACAACAACAACA
JMSF039A13+           AAATCCCCCCCAAAGAAACTACTAAATAAAACAACAACAACTACAACAACAACAACAACA
                      ____________________________________________________________
consensus             AAATCCCCCCCAAAGAAACTACTAAATAAAACAACAACAACTACAACAACAACAACAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           ACAACAACAACAACAAACGACGGACAATTCACAATGGATCTGCAGCTAGGGTTGGACGAA
JMFF038B17+           ACAACAACAACAACAAACGACGGACAATTCACAATGGATCTGCAGCTAGGGCTGGACGAA
JMSF039A13+           ACAACAACAACAACAAACGACGGACAATTCACAATGGATCTGCAGCTAGGGTTGGACGAA
                      ____________________________________________________________
consensus             ACAACAACAACAACAAACGACGGACAATTCACAATGGATCTGCAGCTAGGGTTGGACGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF041C13+           GGCGTGAAGCAGCAGAGAA                                         
JMFF038B17+           GGCGTGAAGCAGCAGAGAAAATCTCTGCTATATCTCCCACGATATAAATATGTAGTGTAC
JMSF039A13+           GGCGTGAAGCAGCAGAGAAAATCTCTGCTATATCTCCCACGATATAAATATGTAGTGTAC
                      ____________________________________________________________
consensus             GGCGTGAAGCAGCAGAGAAAATCTCTGCTATATCTCCCACGATATAAATATGTAGTGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038B17+           GTATATATAACAGCAAATGAGGAGGAGAAACGGTGGTTGGCGGAGGTTGAAGGCGACGGG
JMSF039A13+           GTATATATAACAGCAAATGAGGAGGAGAAACGGTGGTTGGCGGAGGTTGAAGGCGACGGG
                      ____________________________________________________________
consensus             GTATATATAACAGCAAATGAGGAGGAGAAACGGTGGTTGGCGGAGGTTGAAGGCGACGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038B17+           AGGAGGAAGAGGGGGTCGAGGACGACCGACGGAGAAATAGCAGACGCGGAAA        
JMSF039A13+           AGGAGGAAGAGGGGGTCGAGGACGACCGACGGAGAAATAGCAGACGCGGAAATGAAGACC
                      ____________________________________________________________
consensus             AGGAGGAAGAGGGGGTCGAGGACGACCGACGGAGAAATAGCAGACGCGGAAATGAAGACC