Contig 005229:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038P03Sequence667005229 (2)ref|XP_009614246.1|196PREDICTED: uncharacterized protein LOC104107212 [Nicotiana tomentosiformis]786005229 (2)ref|XP_009765447.1|127PREDICTED: uncharacterized protein LOC104216993 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF038P03-           CAGCTTTTGTTAAATTTATTAGTTTTTNTTTCATGTATACTGCTCAGAATTCCGTTCGG
                      ____________________________________________________________
consensus              CAGCTTTTGTTAAATTTATTAGTTTTTNTTTCATGTATACTGCTCAGAATTCCGTTCGG
 
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rJMSF038P03-          AGATCCAACCGAACCGAANGATTAAATTACATTTAAGTTTAAAACATAATTATGTTTAAA
                      ____________________________________________________________
consensus             AGATCCAACCGAACCGAANGATTAAATTACATTTAAGTTTAAAACATAATTATGTTTAAA
 
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rJMSF038P03-          TAATCAAATCTANTATCCGAGCGGTTTGAGCCTCCGACCATCAGAACCGATCCGGCCGCT
                      ____________________________________________________________
consensus             TAATCAAATCTANTATCCGAGCGGTTTGAGCCTCCGACCATCAGAACCGATCCGGCCGCT
 
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rJMSF038P03-          GCACTCCCCTAGACTACTANGAACACTATTGATCACCGCCTGTACAAAATTCAATCTATA
                      ____________________________________________________________
consensus             GCACTCCCCTAGACTACTANGAACACTATTGATCACCGCCTGTACAAAATTCAATCTATA
 
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rJMSF038P03-          NAAAGTTCTTTGGCGAACATGTAATGGACTTTAACCTAGAGTANACTACATTCTACACAA
                      ____________________________________________________________
consensus             NAAAGTTCTTTGGCGAACATGTAATGGACTTTAACCTAGAGTANACTACATTCTACACAA
 
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rJMSF038P03-          CTCAAAATGAAAATGAAAGAGGGTGATCAACATGGGGAATAAAAATCTTTGCCGCGAAAA
JMSF038P03+                                                                GCGAAAA
                      ____________________________________________________________
consensus             CTCAAAATGAAAATGAAAGAGGGTGATCAACATGGGGAATAAAAATCTTTGCCGCGAAAA
 
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rJMSF038P03-          TTTACATGAGAGAACCTATATAGCCGAGGAAAAACAATGCTAAATAAATGTCTAGTCCTC
JMSF038P03+           TTTACATGAGAGAACCTATATAGCCAAGGAAAAACAATGCTAAATAAATGTCTAGTCCTC
                      ____________________________________________________________
consensus             TTTACATGAGAGAACCTATATAGCCGAGGAAAAACAATGCTAAATAAATGTCTAGTCCTC
 
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rJMSF038P03-          TATACGCNGTATCTCACCCATCATTATGCGATTGCTGGTGACCTTGAATCCGAGAAGAGC
JMSF038P03+           TATACGCTGTATCTCACCCATCATTATGCGATTGCTGGTGACCTTGAATCCAAGAAGAGC
                      ____________________________________________________________
consensus             TATACGCTGTATCTCACCCATCATTATGCGATTGCTGGTGACCTTGAATCCGAGAAGAGC
 
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rJMSF038P03-          CGGGTCAATCTGCCTCCCTTTCTTCCCTTTCTTTTTGTTGCTTCGACCACCCTGGGCNGC
JMSF038P03+           CGGGTCAATCTGCCTCCCTTTCTTCCCTTTCTTTTTGTTGCTTCGACCACCCTGGGCTGC
                      ____________________________________________________________
consensus             CGGGTCAATCTGCCTCCCTTTCTTCCCTTTCTTTTTGTTGCTTCGACCACCCTGGGCTGC
 
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rJMSF038P03-          ATCTGATGACTNAGAAGCAGCTGTTGAAGAATGAACCTCCGGGGAGGCCTTCTTTGCAGT
JMSF038P03+           ATCTGATGACTCAGAAGCAGCTGTTGAAGAATGAACCTCCAGGGAGGCCTTCTTTGCAGT
                      ____________________________________________________________
consensus             ATCTGATGACTCAGAAGCAGCTGTTGAAGAATGAACCTCCGGGGAGGCCTTCTTTGCAGT
 
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rJMSF038P03-          NCTCTTAAGCATGNCACTGAATGTTGTCTCNGTAACTTCTCCATCACCACAAGATGCAGT
JMSF038P03+           ACTCTTAAGCATGTCACTGAATGTTGTCTCTGTAACTTCTCCATCACCACAAGATGCAGT
                      ____________________________________________________________
consensus             ACTCTTAAGCATGTCACTGAATGTTGTCTCTGTAACTTCTCCATCACCACAAGATGCAGT
 
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rJMSF038P03-          TCGGCGGAAACTTGTGTCCTTTTTCCCAGATGCANAAGTACCCGAGACTTGATTTGATGC
JMSF038P03+           TCGGCGGAAACTTGTGTCCTTTTTCCCAGATGCAGAAGTACCCGAGACTTGATTTGATGC
                      ____________________________________________________________
consensus             TCGGCGGAAACTTGTGTCCTTTTTCCCAGATGCAGAAGTACCCGAGACTTGATTTGATGC
 
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rJMSF038P03-          ATTAGCTACTCCATCCCGTTTTTCCACTTCACAAGTTACTGCATTGGAAGGACTTCTCCC
JMSF038P03+           ATTAGCTACTCCATCCCGTTTTTCCACTTCACAAGTTACTGCATTGGAAGGACTTCTCCC
                      ____________________________________________________________
consensus             ATTAGCTACTCCATCCCGTTTTTCCACTTCACAAGTTACTGCATTGGAAGGACTTCTCCC
 
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rJMSF038P03-          TCTGACA                                                     
JMSF038P03+           TCTGACAAGCCGATCAACGTTCATCTCAGACAAACCTTCTTGATTTGATAAAACTCGCAA
                      ____________________________________________________________
consensus             TCTGACAAGCCGATCAACGTTCATCTCAGACAAACCTTCTTGATTTGATAAAACTCGCAA
 
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JMSF038P03+           AACAGGCGGACGTTTTAGCAAAATGTTTTCTGGACCTCTTGATGTAGCAGCAGCAGATGT
                      ____________________________________________________________
consensus             AACAGGCGGACGTTTTAGCAAAATGTTTTCTGGACCTCTTGATGTAGCAGCAGCAGATGT
 
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JMSF038P03+           ACGATCCTTATTTACATCCTCTGCCAGGGCACCACCAGCACGAATGTCATCGCTGTACAA
                      ____________________________________________________________
consensus             ACGATCCTTATTTACATCCTCTGCCAGGGCACCACCAGCACGAATGTCATCGCTGTACAA
 
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JMSF038P03+           GCCTCCAGTGCTGAGCGAAGTGTTCCTTCTCAGAACACTAACTGGGCCTTCCCCTTGATC
                      ____________________________________________________________
consensus             GCCTCCAGTGCTGAGCGAAGTGTTCCTTCTCAGAACACTAACTGGGCCTTCCCCTTGATC