| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018H12 | Sequence | 493 | 005227 (4) | ref|XP_011094954.1| | 9e-05 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Sesamum | 799 | 004023 (4) | ref|XP_009759025.1| | 4e-72 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Nicotia |
| JMFF023H11 | Sequence | 507 | 005227 (4) | ref|XP_011094954.1| | 3e-22 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Sesamum | 719 | 004023 (4) | ref|XP_009759025.1| | 2e-48 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Nicotia |
| JMFF029D10 | Sequence | 486 | 005227 (4) | ref|XP_011094954.1| | 5e-11 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Sesamum | 790 | 004023 (4) | ref|XP_009759025.1| | 4e-69 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Nicotia |
| JMSF038K06 | Sequence | 683 | 005227 (4) | ref|XP_011094954.1| | 1e-26 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Sesamum | 901 | 004023 (4) | ref|XP_009759025.1| | 3e-92 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Nicotia |
This contig is upended
. : . : . : . : . : . :
JMSF038K06+ GGTAACATAACAAATGCAAGCCCA
____________________________________________________________
consensus GGTAACATAACAAATGCAAGCCCA
. : . : . : . : . : . :
JMSF038K06+ TCCCCACTTAGCCTTGACAAAGAAAACGCAAAATAAGTGGAAAAAGACACCANTTTCCTG
____________________________________________________________
consensus TCCCCACTTAGCCTTGACAAAGAAAACGCAAAATAAGTGGAAAAAGACACCANTTTCCTG
. : . : . : . : . : . :
JMFF023H11+ TTTCCCTCAACAAGCTTAATGGGTTTCTTGCTCATGATTCTTCCAGCCCCAGGACTC
JMSF038K06+ GGTTTTCCCTCAACAAGCTTAATGGGTTTCTTGCTCATGATTCTTCCAGCCCCAGGACTC
____________________________________________________________
consensus GGTTTTCCCTCAACAAGCTTAATGGGTTTCTTGCTCATGATTCTTCCAGCCCCAGGACTC
. : . : . : . : . : . :
JMFF023H11+ ATTTCACTACCATCAATTTCTATAGACAAACTATCATTAACCACCTTAGTGTCACCATAC
JMFF029D10+ CCATAC
JMFF018H12+ CCATAC
JMSF038K06+ ATTTCACTACCATCAATTTCTATAGACAAACTATCATTAACCACCTTAGTGTCACCATAC
____________________________________________________________
consensus ATTTCACTACCATCAATTTCTATAGACAAACTATCATTAACCACCTTAGTGTCACCATAC
. : . : . : . : . : . :
JMFF023H11+ AGAGCAATCAGAGAGTCAAAGTTTGAATCTTTGCCAAAATTCTTGAAAGCAAATGACAAG
JMFF029D10+ AGAGCAATCAGAGAGTCAAAGTTTGAATCTTTGCCAAAATTCTTGAAAGCAAATGACAAG
JMFF018H12+ AGAGCAATCAGAGAGTCAAAGTTTGAATCTTTGCCAAAATTCTTGAAAGCAAATGACAAG
JMSF038K06+ AGAGCAATCAGAGAGTCAAAGTTTGAATCTTTGCCAAAATTCTTGAAAGCAAATGACAAG
____________________________________________________________
consensus AGAGCAATCAGAGAGTCAAAGTTTGAATCTTTGCCAAAATTCTTGAAAGCAAATGACAAG
. : . : . : . : . : . :
JMFF023H11+ TTTGGGTCTGCAGACATGAATTTGAAGCAGAGACTGAGGAAAAAGAATGCCAAAAAGTAC
JMFF029D10+ TTTGGGTCTGCAGACATGAATTTGAAGCAGAGACTGAGGAAAAAGAATGCCAAAAAGTAC
JMFF018H12+ TTTGGGTCTGCAGACANGAATTTGAAGCAGAGACTGAGGAAAAAGAATGCCAAAAAGTAC
JMSF038K06+ TTTGGGTCTGCAGACANGAATTTGAAGCAGAGACTGAGGAAAAAGAATGCCAAAAAGTAC
____________________________________________________________
consensus TTTGGGTCTGCAGACATGAATTTGAAGCAGAGACTGAGGAAAAAGAATGCCAAAAAGTAC
. : . : . : . : . : . :
JMFF023H11+ CTGGGCTTGGGGCATGAAACTGAGGCCATTCTTGATCTTGGTTTGAGCCTCTAGTTCACA
JMFF029D10+ CTGGGCTTGGGGCATGAAACTGAGGCCATTCTTGATCTTGGTTTGAGCCTCTAGTTCACA
JMFF018H12+ CTGGGCTTGGGGCANGAAACTGAGGCCATTCTTGATCTTGGTTTGAGCCTCTAGTTCACA
JMSF038K06+ CTGGGCTTGGGGCANGAAACTGAGGCCANTCTTGATCTTGGTTTGAGCCTCTAGTTCACA
____________________________________________________________
consensus CTGGGCTTGGGGCATGAAACTGAGGCCATTCTTGATCTTGGTTTGAGCCTCTAGTTCACA
. : . : . : . : . : . :
JMFF023H11+ GTATGT-ATTTTGTCTGCTCCTCTGGAATCACAAGAATGGATTCTTCTTCTTTATGAAGC
JMFF029D10+ GTATGTCTTTTTGTCTGCTCCTCTGGAATCACAAGAATGGATTCTTCTTCTTTATGAAGC
JMFF018H12+ GTATGT-ATTTTGTCTGCTCCTCTGGAATCACAAGAATGGATTCTTCTTCTTTATGAAGC
JMSF038K06+ GTATGT-ATTTTGTCTGCTCCTCTGGAATCACAAGAATGGATTCTTCTTCTTTATGAAGC
____________________________________________________________
consensus GTATGT-ATTTTGTCTGCTCCTCTGGAATCACAAGAATGGATTCTTCTTCTTTATGAAGC
. : . : . : . : . : . :
JMFF023H11+ CATGAAGAAGAGATAAAGCATCATTTATGTGCGTGTGATGTTTGTGTTAATGAGAAGAAT
JMFF029D10+ CATGAAGAAGAGATAAAGCATCATTTATGTGCGTGTGATGTTTGTGTTAATGAGAAGAAT
JMFF018H12+ CANGAAGAAGAGATAAAGCATCATTTATGTGCGTGTGATGTTTGTGTTAATGAGAAGAAT
JMSF038K06+ CANGAAGAAGAGATAAAGCATCATTTATGTGCGTGTGATGTTTGTGTTAATGAGAAGAAT
____________________________________________________________
consensus CATGAAGAAGAGATAAAGCATCATTTATGTGCGTGTGATGTTTGTGTTAATGAGAAGAAT
. : . : . : . : . : . :
JMFF023H11+ TAAGAATAGTAATTTCTAGGGCTTGAGAGTTGAGAGTGGAGAAAATCAGAAAAATCTTGG
JMFF029D10+ TAAGAATAGTAATTTCTAGGGCTTGAGAGTTGAGAGTGGAGAAAATCAGAAAAATCTTGG
JMFF018H12+ TAAGAATAGTAATTTCTAGGGCTTGAGAGTTGAGAGTGGAGAAAATCAGAAAAATCTTGG
JMSF038K06+ TAAGAATAGTAATTTCTAGGGCTTGAGAGTTGAGAGTGGAGAAAATCAGAAAAATCTTGG
____________________________________________________________
consensus TAAGAATAGTAATTTCTAGGGCTTGAGAGTTGAGAGTGGAGAAAATCAGAAAAATCTTGG
. : . : . : . : . : . :
JMFF023H11+ GGAAAAGAGAAGGGGTGGTGGTGGGTTGGCT
JMFF029D10+ GGAAAAGAGAAGGGGTGGTGGTGGGTTGGCTAACTTGGCTTGGATGTTGTGACAATTAAA
JMFF018H12+ GGAAAAGAGAAGGGGTGGTGGTGGGTTGGCTAACTTGGCTTGGATGTTGTGACAATTAAA
JMSF038K06+ GGAAAAGAGAAGGGGTGGTGGTGGGTTGGCTAACTTGGCTTGGATGTTGTGACAATTAAA
____________________________________________________________
consensus GGAAAAGAGAAGGGGTGGTGGTGGGTTGGCTAACTTGGCTTGGATGTTGTGACAATTAAA
. : . : . : . : . : . :
JMFF029D10+ TTCGTTTCACTTGATTTCTGCTACCACTCTCTGCATCTCTCTCTCTCTCTCTCTCTC
JMFF018H12+ TTCGTTTCACTTGATTTCTGCTACCACTCTCTGCATCTCTCTCTCTCTCTCTCTCTC
JMSF038K06+ TTCGTTTCACTTGATTTCTGCTACCACTCTCTGCATCTCTCTCTCTCTCTCTCTCTCTCC
____________________________________________________________
consensus TTCGTTTCACTTGATTTCTGCTACCACTCTCTGCATCTCTCTCTCTCTCTCTCTCTCTCC