Contig 005226:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E01Sequence478005226 (6)ref|XP_007044913.1|231TCP-1/cpn60 chaperonin family protein isoform 2 [Theobroma cacao] gb|EOY00745.1|598010103 (9)ref|XP_004239159.1|6e-107PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMFF040F17Sequence563005226 (6)ref|XP_004239159.1|4e-95PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]746010103 (9)ref|XP_004239159.1|9e-122PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF038J20Sequence685005226 (6)ref|XP_010248739.1|4e-124PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]840010103 (9)ref|XP_004239159.1|2e-151PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF039J20Sequence687005226 (6)ref|XP_010248739.1|2e-123PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]666010103 (9)ref|XP_004239159.1|2e-110PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF048K12Sequence695005226 (6)ref|XP_010248739.1|5e-124PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]760010103 (9)ref|XP_004239159.1|3e-122PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF049O05Sequence663005226 (6)ref|XP_004239159.1|3e-108PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]729010103 (9)ref|XP_004239159.1|1e-114PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039J20+ TCTGCAACAGCGAGAANTGCTTTGACA
JMSF048K12+ TGCAACAGCGAGAACTGCTTTGACA
JMSF038J20+ TGCAACAGCGAGAACTGCTTTGACA
                      ____________________________________________________________
consensus TCTGCAACAGCGAGAACTGCTTTGACA
 
. : . : . : . : . : . :
JMSF039J20+ GCAATCTCAGCTAAGTTACGCTTGCATCTATTCACAATCTTAGATGACAAGGTAGTCATG
JMSF048K12+ GCAATCTCAGCTAAGTTACGCTTGCATCTATTCACAATCTTAGATGACAAGGTAGTCATG
JMSF049O05+ GATGACAAGGTAGTCATG
JMSF038J20+ GCAATCTCAGCTAAGTTACGCTTGCATCTATTCACAATCTTAGATGACAAGGTAGTCATG
                      ____________________________________________________________
consensus GCAATCTCAGCTAAGTTACGCTTGCATCTATTCACAATCTTAGATGACAAGGTAGTCATG
 
. : . : . : . : . : . :
JMSF039J20+ CAAGTTTGAACCAAAGGCTCAATGTCATTCACACCAAATTCAAATTTATGTGCAATGCGC
JMFF040F17+ AATTCAAATTTATGTGCAATGCGC
JMSF048K12+ CAAGTTTGAACCAAAGGCTCAATGTCATTCACACCAAATTCAAATTTATGTGCAATGCGC
JMSF049O05+ CAAGTTTGAACCAAAGGCTCAATGTCATTCACACCAAATTCAAATTTATGTGCAATGCGC
JMSF038J20+ CAAGTTTGAACCAAAGGCTCAATGTCATTCACACCAAATTCAAATTTATGTGCAATGCGC
                      ____________________________________________________________
consensus CAAGTTTGAACCAAAGGCTCAATGTCATTCACACCAAATTCAAATTTATGTGCAATGCGC
 
. : . : . : . : . : . :
JMSF039J20+ TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
JMFF040F17+ TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
JMSF048K12+ TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
JMSF049O05+ TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
JMSF038J20+ TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
                      ____________________________________________________________
consensus TCCAGATGTCCAACTGCAATCCTGGATGCCATTTCATATCCCTCAGCAATTCGAATTGGA
 
. : . : . : . : . : . :
JMSF039J20+ TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
JMFF005E01+ TTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
JMFF040F17+ TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
JMSF048K12+ TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
JMSF049O05+ TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
JMSF038J20+ TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
                      ____________________________________________________________
consensus TGAATACCACGTTCTAACAACTTTTCAGCTTGTTCAAGAAGTGCTCCAGCCAGGACAACA
 
. : . : . : . : . : . :
JMSF039J20+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
JMFF005E01+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
JMFF040F17+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
JMSF048K12+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
JMSF049O05+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
JMSF038J20+ ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
                      ____________________________________________________________
consensus ACTCCAGTTGTTCCATCACCAATCTCATAATCCTGACTTCGGGACAATTCTACCATAAGC
 
. : . : . : . : . : . :
JMSF039J20+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
JMFF005E01+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
JMFF040F17+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
JMSF048K12+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
JMSF049O05+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
JMSF038J20+ TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
                      ____________________________________________________________
consensus TTTGCAATTTGATTGTCAACATCCATCTGCTCCAAGATGGTTGCACCATCATTTGTGATG
 
. : . : . : . : . : . :
JMSF039J20+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
JMFF005E01+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
JMFF040F17+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
JMSF048K12+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
JMSF049O05+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
JMSF038J20+ GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
                      ____________________________________________________________
consensus GTGACGTCGCCATCAGGGCTCTGAAGCATCTTGTCCATGCCTTTGGGGCCGAGAGAGGTG
 
. : . : . : . : . : . :
JMSF039J20+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCCT
JMFF005E01+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCC
JMFF040F17+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCCT
JMSF048K12+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCC
JMSF049O05+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCC
JMSF038J20+ CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCCT
                      ____________________________________________________________
consensus CGGAGGATGCGAGCGACTGCCTTTCCGGCAGAAATGTTGGCCTTCTGAGCATCGAGGCCT
 
. : . : . : . : . : . :
JMSF039J20+ CTGAGCCTCATCTTCTGCTCCTGCTCCTTGATTATTATGAACGGCCTTCCGAACTCATCG
JMFF040F17+ CTGAGCCTCATCTTCTGCTCCTGCTCCTTGATTATTATGAACGGCCTTCCGAACTCATCG
JMSF038J20+ CTGAGCCTCATCTTCTGCTCCTGCTCCTTGATTATTATGAACGGCCTTCCGAACTCATCG
                      ____________________________________________________________
consensus CTGAGCCTCATCTTCTGCTCCTGCTCCTTGATTATTATGAACGGCCTTCCGAACTCATCG
 
. : . : . : . : . : . :
JMSF039J20+ AAAGCCAAGGCCATTGCTACTCGCTCTCGATCTCGATCGGATTCACAACTTCTCTTCAGA
JMFF040F17+ AAAGCCAAGGCCATTGCTACTCGCTCTCGATCTCGATCGGATTCACAACTTCTCTTCAGA
JMSF038J20+ AAAGCCAAGGCCATTGCTACTCGCTCTCGATCTCGATCGGATTCACAACTTCTCTTCAGA
                      ____________________________________________________________
consensus AAAGCCAAGGCCATTGCTACTCGCTCTCGATCTCGATCGGATTCACAACTTCTCTTCAGA
 
. : . : . : . : . : . :
JMSF039J20+ GACTCCGAAAGAGAAAAGAACGATATAGTGTGACGCTCAGTGTGGCGTAGAAAGTTCCT
JMFF040F17+ GACTCCGAAAGAGAAAAGAACGATATAGTGTGACGCTCAGTGTGGCGTAGAAAGTTCCT
JMSF038J20+ GACTCCGAAAGAGAAAAGAACGATATAGTGTGACGCTCAGTGTGGCGTAGAAAGTTCCTC
                      ____________________________________________________________
consensus GACTCCGAAAGAGAAAAGAACGATATAGTGTGACGCTCAGTGTGGCGTAGAAAGTTCCTC