| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003J19 | Sequence | 322 | 005224 (4) | 693 | 014029 (6) | gb|KCW58270.1| | 2e-83 | hypothetical protein EUGRSUZ_H00962 [Eucalyptus grandis] | |||
| JMSF005B24 | Sequence | 268 | 005224 (4) | 524 | 012357 (4) | gb|ACA23472.1| | 9e-45 | chaperonin 60 alpha subunit [Arachis diogoi] | |||
| JMSF038H15 | Sequence | 659 | 005224 (4) | gb|EPS57357.1| | 2e-54 | hypothetical protein M569_17461, partial [Genlisea aurea] | 910 | 014029 (6) | ref|XP_007017848.1| | 1e-126 | Calcium-dependent lipid-binding (CaLB domain) family protein isoform 3 [Theobro |
| JMSF048B21 | Sequence | 716 | 005224 (4) | ref|XP_011083585.1| | 2e-114 | PREDICTED: synaptotagmin-2 [Sesamum indicum] | 694 | 014029 (6) | gb|KCW58270.1| | 1e-82 | hypothetical protein EUGRSUZ_H00962 [Eucalyptus grandis] |
This contig is upended
. : . : . : . : . : . :
JMSF048B21+ GACATAGCATCAGCTCCCAGCNATTTTCAGTCCAAA
____________________________________________________________
consensus GACATAGCATCAGCTCCCAGCNATTTTCAGTCCAAA
. : . : . : . : . : . :
JMSF048B21+ GTCAACATGGGGCTTCTCCATGAGAGAAACCAGTATTTTTGCGAAACATGGGAAGGTTGG
____________________________________________________________
consensus GTCAACATGGGGCTTCTCCATGAGAGAAACCAGTATTTTTGCGAAACATGGGAAGGTTGG
. : . : . : . : . : . :
JMSF048B21+ AACCAGTGGCTTCAGTGTAATACGCGGGCAAGCAAATACTTGCAGGTCAAGCACCTGAGC
____________________________________________________________
consensus AACCAGTGGCTTCAGTGTAATACGCGGGCAAGCAAATACTTGCAGGTCAAGCACCTGAGC
. : . : . : . : . : . :
JMSF048B21+ AGTGGCTTTGAGTCCAAATGCCTTGATTGCAACAAGGATGTTAGGGTTACCTGCCCACTT
____________________________________________________________
consensus AGTGGCTTTGAGTCCAAATGCCTTGATTGCAACAAGGATGTTAGGGTTACCTGCCCACTT
. : . : . : . : . : . :
JMSF048B21+ CAAGGCTAGTTCCATTATCAGTTCCTTCTCCTCAGTGGAATAAACTTTCATTCCTTGAAA
____________________________________________________________
consensus CAAGGCTAGTTCCATTATCAGTTCCTTCTCCTCAGTGGAATAAACTTTCATTCCTTGAAA
. : . : . : . : . : . :
JMSF048B21+ AGTAGGAGGCAGGCAGCCCAGAGTAAGCGCTTCAAATTCAACCGACTCAATTTTGTACTT
JMSF038H15+ GTAGGAGGCAGGCAGCCCAGAGTAAGCGCTTCAAATTCANCCGACTCAATTTTGTACTT
____________________________________________________________
consensus AGTAGGAGGCAGGCAGCCCAGAGTAAGCGCTTCAAATTCAACCGACTCAATTTTGTACTT
. : . : . : . : . : . :
JMSF048B21+ GGGTATTTGCTCAGCTATTATAGGCGTCGCTATCTGCTTCACTTGCTTGCAAATTGCCTT
JMSF038H15+ GGGTATTTGCTCAGCTATTATAGGCGTCGCTATCTGCTTCACTTGCTTGCAAATTGCCTT
____________________________________________________________
consensus GGGTATTTGCTCAGCTATTATAGGCGTCGCTATCTGCTTCACTTGCTTGCAAATTGCCTT
. : . : . : . : . : . :
JMSF048B21+ GTCCAAATAAGGCCACATCAATTCAACAAACTTATTAAGCCAATCAAGACGATCAAAATC
JMSF038H15+ GTCCAAATAAGGCCACATCAATTCAACAAACTTATTAAGCCAATCAAGACGATCAAAATC
____________________________________________________________
consensus GTCCAAATAAGGCCACATCAATTCAACAAACTTATTAAGCCAATCAAGACGATCAAAATC
. : . : . : . : . : . :
JMSF048B21+ TGGATTTTTCACCCAAAGGGGTATCTCAGGCATCAGCTTTTGAAGACTCTTAGAATCTTT
JMSF038H15+ TGGATTTTTCACCCAAAGGGGTATCTCAGGCATCAGCTTTTGAAGACTCTTAGAATCTTT
____________________________________________________________
consensus TGGATTTTTCACCCAAAGGGGTATCTCAGGCATCAGCTTTTGAAGACTCTTAGAATCTTT
. : . : . : . : . : . :
JMSF048B21+ CTCGGCCAAAGGACGAATATCAGGGTCCTTAACATCAGTAGGCTGGAAGTAGATGAACAT
JMSF003J19+ TCGGCCAAAGGACGAATATCAGGGTCCTTAACATCAGTAGGCTGGAAGTAGATGAACAT
JMSF038H15+ CTCGGCCAAAGGACGAATATCAGGGTCCTTAACATCAGTAGGCTGGAAGTAGATGAACAT
____________________________________________________________
consensus CTCGGCCAAAGGACGAATATCAGGGTCCTTAACATCAGTAGGCTGGAAGTAGATGAACAT
. : . : . : . : . : . :
JMSF048B21+ GAAGTACCCAATCGCAAGCCCAATTGAGATCCCAATTCCAAACCCAAAAAACCCCATTAC
JMSF003J19+ GAAGTACCCAATCGCAAGCCCAATTGAGATCCCAATTCCAAACCCAAAAAACCCCATTAC
JMSF005B24+ CCCATTAC
JMSF038H15+ GAAGTACCCAATCGCAAGCCCAATTGAGATCCCAATTCCAAACCCAAAAAACCCCATTAC
____________________________________________________________
consensus GAAGTACCCAATCGCAAGCCCAATTGAGATCCCAATTCCAAACCCAAAAAACCCCATTAC
. : . : . : . : . : . :
JMSF048B21+ AGTGCTTATGAAACCCATCTCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAA
JMSF003J19+ AGTGCTTATGAAACCCATCTCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAA
JMSF005B24+ AGTGCTTATGAAACCCATCTCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAA
JMSF038H15+ AGTGCTTATGAAACCCATCTCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAA
____________________________________________________________
consensus AGTGCTTATGAAACCCATCTCAGATCTTCTTCGAAATCTCCGCTACAATTCTCTGCAAAA
. : . : . : . : . : . :
JMSF048B21+ CC
JMSF003J19+ CCTTCCACAAAAAAGTGCCCTTTATTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
JMSF005B24+ CCTTCCACAAAAAAGTGCCCTTTATTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
JMSF038H15+ CCTTCCACAAAAAAGTGCCCTTTATTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
____________________________________________________________
consensus CCTTCCACAAAAAAGTGCCCTTTATTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
. : . : . : . : . : . :
JMSF003J19+ AAGAAGAAGAAGAAGAACAGAAAAGGAAAGAGAAGAGAAGACAAGACTTTTGCTGGCTTC
JMSF005B24+ AAGAAGAAGAAGAAGAACAGAAAAGGAAAGAGAAGAGAAGACAAGACTTTTGCTGGCTTC
JMSF038H15+ AAGAAGAAGAAGAAGAACAGAAAAGGAAAGAGAAGAGAAGACAAGACTTTTGCTGGCTTC
____________________________________________________________
consensus AAGAAGAAGAAGAAGAACAGAAAAGGAAAGAGAAGAGAAGACAAGACTTTTGCTGGCTTC
. : . : . : . : . : . :
JMSF003J19+ CAGAATCAAGATGCCATCACC
JMSF005B24+ CAGAATCAAGATGCCATCACCACAACACAGTTATTTTTCCGCCATGATTTTACGATCCAA
JMSF038H15+ CAGAATCAAGATGCCATCACCACAACACAGTTATTTTTCCGCCATGATTTTACGATCCAA
____________________________________________________________
consensus CAGAATCAAGATGCCATCACCACAACACAGTTATTTTTCCGCCATGATTTTACGATCCAA
. : . : . : . : . : . :
JMSF005B24+ GAAAATTTAATGCTTACCC
JMSF038H15+ GAAAATTTAATGCTTACCCTATCCTTTGCACCCACCCAAAAATCAATACACATGTATATC
____________________________________________________________
consensus GAAAATTTAATGCTTACCCTATCCTTTGCACCCACCCAAAAATCAATACACATGTATATC