Contig 005223:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022C10Sequence540005223 (2)ref|XP_006342306.1|4e-18PREDICTED: uncharacterized protein LOC102578168 isoform X1 [Solanum tuberosum] 685013707 (2)emb|CAN67532.1|2e-63hypothetical protein VITISV_019583 [Vitis vinifera]
JMSF038F22Sequence703005223 (2)ref|XP_006342306.1|5e-18PREDICTED: uncharacterized protein LOC102578168 isoform X1 [Solanum tuberosum] 856013707 (2)ref|XP_002274820.2|317PREDICTED: uncharacterized protein LOC100249037 [Vitis vinifera] emb|CBI24700.3|

Alignment

This contig is upended


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JMSF038F22+                            CTTCATTAATAGCATCAACAGCACTTGTTTTCACACCAGATAA
                      ____________________________________________________________
consensus                              CTTCATTAATAGCATCAACAGCACTTGTTTTCACACCAGATAA
 
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JMSF038F22+           GGAACTTGCATCCATAGAGAATGAATCAGATGCAGAGGTATTCTGCATAGCATCCAGTTT
                      ____________________________________________________________
consensus             GGAACTTGCATCCATAGAGAATGAATCAGATGCAGAGGTATTCTGCATAGCATCCAGTTT
 
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JMFF022C10+                 GGATTCAGGAATGACAGGTTCTGTCAAAACATCAGCAGGTGCAAAGGCGGCGGA
JMSF038F22+           TGTCGCGGATTCAGGAATGACAGGTTCTGTCAAAACATCAGCAGGTGCAAAGGCGGCGGA
                      ____________________________________________________________
consensus             TGTCGCGGATTCAGGAATGACAGGTTCTGTCAAAACATCAGCAGGTGCAAAGGCGGCGGA
 
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JMFF022C10+           ATTATCTTGGACGACATCCATTGTTATGGATTCAGGAATGGGAGGATCAGCATTTCCAAC
JMSF038F22+           ATTATCTTGGACGACATCCATTGTTATGGATTCAGGAATGGGAGGATCAGCATTTCCAAC
                      ____________________________________________________________
consensus             ATTATCTTGGACGACATCCATTGTTATGGATTCAGGAATGGGAGGATCAGCATTTCCAAC
 
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JMFF022C10+           TACTAAGTTATTGGTAAAATCAGTGAGTTCCTCTTCTCCAATGGATCCACTAGAGCTCTC
JMSF038F22+           TACTAAGTTATTGGTAAAATCAGTGAGTTCCTCTTCTCCAATGGATCCACTAGAGCTCTC
                      ____________________________________________________________
consensus             TACTAAGTTATTGGTAAAATCAGTGAGTTCCTCTTCTCCAATGGATCCACTAGAGCTCTC
 
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JMFF022C10+           AACAAATTTCAGATGTCTTGTGGCAGTAGACGGATAATCATTGACCGCTCCCACTAAATA
JMSF038F22+           AACAAATTTCAGATGTCTTGTGGCAGTAGACGGATAATCATTGACCGCTCCCACTAAATA
                      ____________________________________________________________
consensus             AACAAATTTCAGATGTCTTGTGGCAGTAGACGGATAATCATTGACCGCTCCCACTAAATA
 
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JMFF022C10+           GTTGACACCATTTAATTCAGTTTGGTCATAGAAAACATTGATGGTATCAGTGGAAGCCAA
JMSF038F22+           GTTGACACCATTTAATTCAGTTTGGTCATAGAAAACATTGATGGTATCAGTGGAAGCCAA
                      ____________________________________________________________
consensus             GTTGACACCATTTAATTCAGTTTGGTCATAGAAAACATTGATGGTATCAGTGGAAGCCAA
 
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JMFF022C10+           TCTACCACTTTTTTCTACAAAATTTGAGCATAGGGATGCATTGAGCTGTCCTCTGAAGGA
JMSF038F22+           TCTACCACTTTTTTCTACAAAATTTGAGCATAGGGATGCATTGAGCTGTCCTCTGAAGGA
                      ____________________________________________________________
consensus             TCTACCACTTTTTTCTACAAAATTTGAGCATAGGGATGCATTGAGCTGTCCTCTGAAGGA
 
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JMFF022C10+           TGAACTCTGAAGCTGAACTCCATAGGACCAATCCACTAAACTGCACTTTACATCACAGGT
JMSF038F22+           TGAACTCTGAAGCTGAACTCCATAGGACCAATCCACTAAACTGCACTTTACATCACAGGT
                      ____________________________________________________________
consensus             TGAACTCTGAAGCTGAACTCCATAGGACCAATCCACTAAACTGCACTTTACATCACAGGT
 
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JMFF022C10+           CTTCCAATAGGAGGAGAAGGATCTAAGCCCATTATTGATAGTAATCTGGGAATGGGAGGA
JMSF038F22+           CTTCCAATAGGAGGAGAAGGATCTAAGCCCATTATTGATAGTAATCTGGGAATGGGAGGA
                      ____________________________________________________________
consensus             CTTCCAATAGGAGGAGAAGGATCTAAGCCCATTATTGATAGTAATCTGGGAATGGGAGGA
 
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JMFF022C10+           GCAGCAAGCGGTTGCTGAACACACAGGAAACATTTCAAAGCAATTCTTGAAATGGGCAAA
JMSF038F22+           GCAGCAAGCGGTTGCTGAACACACAGGAAACATTTCAAAGCAATTCTTGAAATGGGCAAA
                      ____________________________________________________________
consensus             GCAGCAAGCGGTTGCTGAACACACAGGAAACATTTCAAAGCAATTCTTGAAATGGGCAAA
 
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JMFF022C10+           TAGAAT                                                      
JMSF038F22+           TAGAATAATTAACAATGCTACAGCTCTACAAAGAAACCCATCAACTTGGATGAAATAATC
                      ____________________________________________________________
consensus             TAGAATAATTAACAATGCTACAGCTCTACAAAGAAACCCATCAACTTGGATGAAATAATC