Contig 005222:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS077G07Sequence624005222 (3)gb|EYU27901.1|2e-47hypothetical protein MIMGU_mgv1a0086241mg, partial [Erythranthe guttata]
JMSF029L22Sequence214005222 (3)gb|AFK37985.1|6e-29unknown [Lotus japonicus]159006579 (32)emb|CDP15759.1|4e-06unnamed protein product [Coffea canephora]
JMSF038C17Sequence671005222 (3)gb|EYU27901.1|5e-39hypothetical protein MIMGU_mgv1a0086241mg, partial [Erythranthe guttata]855019392gb|KDP20886.1|1e-112hypothetical protein JCGZ_21357 [Jatropha curcas]

Alignment

This contig is upended


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JMSF029L22+                          ATGATAAGAAATTTTNGTCTCTATGTTTGACTTCGGAGAATTAGA
JMFS077G07+                   AACCTTGATGATAAGAAATTTTTGTCTCTATGTTTGACTTCGGAGAATTAGA
JMSF038C17+                                                            GGAGAATTAGA
                      ____________________________________________________________
consensus                     AACCTTGATGATAAGAAATTTTTGTCTCTATGTTTGACTTCGGAGAATTAGA
 
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JMSF029L22+           AGCCAAGGCCATTAGCACACCATGACTTTTGAGATGATTAATCAATCGATTGGCACCTGG
JMFS077G07+           AGCCAAGGCCATTAGCACACCATGACTTTTGAGATGATTAATCAATCGATTGGCACCTGG
JMSF038C17+           AGCCAAGGCCATTAGCACACCATGACTTTTGAGATGATTAATCAATCGATTGGCACCTGG
                      ____________________________________________________________
consensus             AGCCAAGGCCATTAGCACACCATGACTTTTGAGATGATTAATCAATCGATTGGCACCTGG
 
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JMSF029L22+           AAGAGCTTTAATATTGGACCACCGCTCAGAAAACATTGGAGTAATTTGTGTAAGAAATTC
JMFS077G07+           AAGAGCTTTAATATTGGACCACCGCTCAGAAAACATTGGAGTAATTTGTGTAAGAAATTC
JMSF038C17+           AAGAGCTTTAATATTGGACCACCGCTCAGAAAACATTGGAGTAATTTGTGTAAGAAATTC
                      ____________________________________________________________
consensus             AAGAGCTTTAATATTGGACCACCGCTCAGAAAACATTGGAGTAATTTGTGTAAGAAATTC
 
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JMSF029L22+           TTCTTTTGTTAAGGGAATCTCATAATCTTCAACAACCACAGCTGCAGCT           
JMFS077G07+           TTCTTTTGTTAAGGGAATCTCATAATCTTCAACAACCACAGCTGCAGCTTCTACAGGTGT
JMSF038C17+           TTCTTTTGTTAAGGGAATCTCATAATCTTCAACAACCACAGCTGCAGCTTCTACAGGTGT
                      ____________________________________________________________
consensus             TTCTTTTGTTAAGGGAATCTCATAATCTTCAACAACCACAGCTGCAGCTTCTACAGGTGT
 
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JMFS077G07+           CTTCCCTACTATTTTATGAGCTTCTCTGCCATCCCATTGCTTTCCATAATTAACTAGGGC
JMSF038C17+           CTTCCCTACTATTTTATGAGCTTCTCTGCCATCCCATTGCTTTCCATAATTAACTAGGGC
                      ____________________________________________________________
consensus             CTTCCCTACTATTTTATGAGCTTCTCTGCCATCCCATTGCTTTCCATAATTAACTAGGGC
 
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JMFS077G07+           AACCTTTAGAACATCACTCACAATGCCATCTGTGTTTAGAAGTGTACCATCCAAATCAAG
JMSF038C17+           AACCTTTAGAACATCACTCACAATGCCATCTGTGTTTAGAAGTGTACCATCCAAATCAAG
                      ____________________________________________________________
consensus             AACCTTTAGAACATCACTCACAATGCCATCTGTGTTTAGAAGTGTACCATCCAAATCAAG
 
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JMFS077G07+           AATAACACAAGAAACAAGCTTCTTTAAAGGTTTCACCAATGACATTGTGAAGAGTGTCAA
JMSF038C17+           AATAACACAAGAAACAAGCTTCTTTAAAGGTTTCACCAATGACATTGTGAAGAGTGTCAA
                      ____________________________________________________________
consensus             AATAACACAAGAAACAAGCTTCTTTAAAGGTTTCACCAATGACATTGTGAAGAGTGTCAA
 
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JMFS077G07+           AGAAGCCCAAATCAAGGTACTTGTGCTCTTTTAGGTAACATATATATCACCTCCTTGCAG
JMSF038C17+           AGAAGCCCAAATCAAGGTACTTGTGCTCTTTTAGGTAACATATATATCACCTCCTTGCAG
                      ____________________________________________________________
consensus             AGAAGCCCAAATCAAGGTACTTGTGCTCTTTTAGGTAACATATATATCACCTCCTTGCAG
 
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JMFS077G07+           CCAGCCACCTAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTACTCCTC
JMSF038C17+           CCAGCCACCTAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTACTCCTC
                      ____________________________________________________________
consensus             CCAGCCACCTAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTACTCCTC
 
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JMFS077G07+           GGTCGTCGAATAATCT                                            
JMSF038C17+           GGTCGTCGAATAATCTAATTGTTCAGCCAGCCAACAAAGCAATCAGCTAATCGGAAGAAT
                      ____________________________________________________________
consensus             GGTCGTCGAATAATCTAATTGTTCAGCCAGCCAACAAAGCAATCAGCTAATCGGAAGAAT
 
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JMSF038C17+           CAAATTAATCCAATCCAGCAAGGGAAATCACGTCAGAACACAGTTCCAATCGTGTTGCTT
                      ____________________________________________________________
consensus             CAAATTAATCCAATCCAGCAAGGGAAATCACGTCAGAACACAGTTCCAATCGTGTTGCTT
 
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JMSF038C17+           TGCTAATTTTGACCCGAATGAAAGAAGGCGAATCCAGTATTCTCCTCCGTATTACGACCC
                      ____________________________________________________________
consensus             TGCTAATTTTGACCCGAATGAAAGAAGGCGAATCCAGTATTCTCCTCCGTATTACGACCC