Contig 005221:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN025E14Sequence648005221 (5)emb|CDP14057.1|2e-72unnamed protein product [Coffea canephora]
JMSF015J01Sequence458005221 (5)emb|CDP14057.1|1e-70unnamed protein product [Coffea canephora]698005221 (5)emb|CDP14057.1|6e-06unnamed protein product [Coffea canephora]
JMSF038C07Sequence637005221 (5)emb|CDP14057.1|2e-72unnamed protein product [Coffea canephora]884005221 (5)emb|CDP14057.1|5e-52unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF015J01-                          GGAGCAGCTAGATTCCATTGCAATGGATTATTCATAGTTACATT
rJMSF038C07-                                                                   ATT
                      ____________________________________________________________
consensus                             GGAGCAGCTAGATTCCATTGCAATGGATTATTCATAGTTACATT
 
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rJMSF015J01-          TTTCTTGAGGGATACTAATATACAATCATGCAGATTTCTGGGCACACAACATTGATGATA
rJMSF038C07-          TTTCTTGAGGGATACTAATATACAATCATGCAGATTTCTGGGCACACAACATTGATGATA
                      ____________________________________________________________
consensus             TTTCTTGAGGGATACTAATATACAATCATGCAGATTTCTGGGCACACAACATTGATGATA
 
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rJMSF015J01-          ATCGAGTAAGGAATTAATTACTTTGAATGCTGGTATTTACCGTAATCATCCCTTGCAGCA
rJMSF038C07-          ATCGAGTAAGGAATTAATTACTTTGAATGCTGGTATTTACCGTAATCATCCCTTGCAGCA
                      ____________________________________________________________
consensus             ATCGAGTAAGGAATTAATTACTTTGAATGCTGGTATTTACCGTAATCATCCCTTGCAGCA
 
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rJMSF015J01-          ATTTCACTCTCTGTGCTCTCTGCAATCTTTTCCTCTTCATATTTTATACCTCCGTCCAAT
rJMSF038C07-          ATTTCACTCTCTGTGCTCTCTGCAATCTTTTCCTCTTCATATTTTATACCTCCGTCCAAT
                      ____________________________________________________________
consensus             ATTTCACTCTCTGTGCTCTCTGCAATCTTTTCCTCTTCATATTTTATACCTCCGTCCAAT
 
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rJMSF015J01-          GCTAGTCCTCCTAGGGCTCCGGCCACAGCTCCGGCAGCCAATCCAGCTCCCGCTCCCATC
rJMSF038C07-          GCTAGTCCTCCTAGGGCTCCGGCCACAGCTCCGGCAGCCAATCCAGCTCCCGCTCCCATC
                      ____________________________________________________________
consensus             GCTAGTCCTCCTAGGGCTCCGGCCACAGCTCCGGCAGCCAATCCAGCTCCCGCTCCCATC
 
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rJMSF015J01-          TTCCCGCTGCGTTTGTGATCATACTGTGCATAATCCACTGGGGCGCTCGGTCCTGGCGCG
rJMSF038C07-          TTCCCGCTGCGTTTGTGATCATACTGTGCATAATCCACTGGGGCGCTCGGTCCTGGCGCG
                      ____________________________________________________________
consensus             TTCCCGCTGCGTTTGTGATCATACTGTGCATAATCCACTGGGGCGCTCGGTCCTGGCGCG
 
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rJMSF015J01-          GTGGATTGCCAGGGCCGTGGAGGCGGCGGCGGTGGTTGGGAGTAGTAACAGGGGTAGCAG
rJMSF038C07-          GTGGATTGCCAGGGCCGTGGAGGCGGCGGCGGTGGTTGGGAGTAGTAACAGGGGTAGCAG
JMFN025E14+                                                                   GCAG
                      ____________________________________________________________
consensus             GTGGATTGCCAGGGCCGTGGAGGCGGCGGCGGTGGTTGGGAGTAGTAACAGGGGTAGCAG
 
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rJMSF015J01-          TTGGAGTACGGATCACCGTATCCGCCGTAGGGATAAGTGTGCGGAGGGAGAGGCGGCGGC
rJMSF038C07-          TTGGAGTACGGATCACCGTATCCGCCGTAGGGATAAGTGTGCGGAGGGAGAGGCGGCGGC
JMFN025E14+           TTGGAGTACGGATCACCGTATCCGCCGTAGGGATAAGTGTGCGGAGGGAGAGGCGGCGGC
JMSF038C07+                                  GCCGTAGGGATAAGTGTGCGGAGGGAGAGGCGGCGGC
                      ____________________________________________________________
consensus             TTGGAGTACGGATCACCGTATCCGCCGTAGGGATAAGTGTGCGGAGGGAGAGGCGGCGGC
 
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rJMSF015J01-          GGTGAGGTAGTTAGAGGTAGTGGAGGCGCGTGTGAGCTGTATGGAGCGGGATTGTATGCT
rJMSF038C07-          GGTGAGGTAGTTAGAGGTAGTGGAGGCGCGTGTGAGCTGTATGGAGCGGGATTGTATGCT
JMFN025E14+           GGTGAGGTAGTTAGAGGTAGTGGAGGCGCGTGTGAGCTGTATGGAGCGGGATTGTATGCT
JMSF038C07+           GGTGAGGTAGTTAGAGGTAGTGGAGGCGCGTGTGAGCTGTATGGAGCGGGATTGTATGCT
                      ____________________________________________________________
consensus             GGTGAGGTAGTTAGAGGTAGTGGAGGCGCGTGTGAGCTGTATGGAGCGGGATTGTATGCT
 
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rJMSF015J01-          CCGTAGTCGCGTGTAGCCGGCGGCGGAGGTGCGGATGAGTAATAGTAGCTAGCCGGAGGA
rJMSF038C07-          CCGTAGTCGCGTGTAGCCGGCGGCGGAGGTGCGGATGAGTAATAGTAGCTAGCCGGAGGA
JMFN025E14+           CCGTAGTCGCGTGTAGCCGGCGGCGGAGGTGCGGATGAGTAATAGTAGCTAGCCGGAGGA
JMSF038C07+           CCGTAGTCGCGTGTAGCCGGCGGCGGAGGTGCGGATGAGTAATAGTAGCTAGCCGGAGGA
                      ____________________________________________________________
consensus             CCGTAGTCGCGTGTAGCCGGCGGCGGAGGTGCGGATGAGTAATAGTAGCTAGCCGGAGGA
 
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rJMSF015J01-          GGAATTTGGTATTCCTGGATCTTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
rJMSF038C07-          GGAATTTGGTATTCCTGGATCTTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
JMFN025E14+           GGAATTTGGTATTCCTGGATCTTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
JMSF015J01+                                TTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
JMSF038C07+           GGAATTTGGTATTCCTGGATCTTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
                      ____________________________________________________________
consensus             GGAATTTGGTATTCCTGGATCTTCCGGACGGCGATTTTGAGTCGGATCTTACCCTGAGGA
 
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rJMSF015J01-          CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAG      
rJMSF038C07-          CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAGTCGACG
JMFN025E14+           CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAGTCGACG
JMSF015J01+           CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAGTCGACG
JMSF038C07+           CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAGTCGACG
                      ____________________________________________________________
consensus             CGACCGGAGGGGCGGCGGAGCTGGAAAGCTTTCAGTTGAGTTGAATCGCCCGAGTCGACG
 
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rJMSF038C07-          ACCAGGTCCTTGAGCGGAATCCGAAGCGTACCTACCAGCGGCTTGGGGGTTTCGGAGGGG
JMFN025E14+           ACCAGGTCCTTGAGCGGAATCCGAAGCGTACCTACCAGCGGCTTGGGGGTTTCGGAGGGG
JMSF015J01+           ACCAGGTCCTTGAGCGGAATCCGAAGCGTACCTACCAGCGGCTTGGGGGTTTCGGAGGGG
JMSF038C07+           ACCAGGTCCTTGAGCGGAATCCGAAGCGTACCTACCAGCGGCTTGGGGGTTTCGGAGGGG
                      ____________________________________________________________
consensus             ACCAGGTCCTTGAGCGGAATCCGAAGCGTACCTACCAGCGGCTTGGGGGTTTCGGAGGGG
 
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rJMSF038C07-          ACGGAGTGGAAGATCTCGACGGCGAGCAGCGATTCCTGCGGCGGCAGCGTGAGAGGGACG
JMFN025E14+           ACGGAGTGGAAGATCTCGACGGCGAGCAGCGATTCCTGCGGCGGCAGCGTGAGAGGGACG
JMSF015J01+           ACGGAGTGGAAGATCTCGACGGCGAGCAGCGATTCCTGCGGCGGCAGCGTGAGAGGGACG
JMSF038C07+           ACGGAGTGGAAGATCTCGACGGCGAGCAGCGATTCCTGCGGCGGCAGCGTGAGAGGGACG
                      ____________________________________________________________
consensus             ACGGAGTGGAAGATCTCGACGGCGAGCAGCGATTCCTGCGGCGGCAGCGTGAGAGGGACG
 
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rJMSF038C07-          ACGAAACGCTCGTTCCAGACGGGTTTGGTCGAGCCGGAATCGTCCGATTTAGTGGCGAGA
JMFN025E14+           ACGAAACGCTCGTTCCAGACGGGTTTGGTCGAGCCGGAATCGTCCGATTTAGTGGCGAGA
JMSF015J01+           ACGAAACGCTCGTTCCAGACGGGTTTGGTCGAGCCGGAATCGTCCGATTTAGTGGCGAGA
JMSF038C07+           ACGAAACGCTCGTTCCAGACGGGTTTGGTCGAGCCGGAATCGTCCGATTTAGTGGCGAGA
                      ____________________________________________________________
consensus             ACGAAACGCTCGTTCCAGACGGGTTTGGTCGAGCCGGAATCGTCCGATTTAGTGGCGAGA
 
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rJMSF038C07-          CGGCGGTCGGGGTCAATCCAGAGGATGACGTAAGGCTTGAG                   
JMFN025E14+           CGGCGGTCGGGGTCAATCCAGAGGATGACGTAAGGCTTGAGATCGCCGTGACGCCAGTTG
JMSF015J01+           CGGCGGTCGGGGTCAATCCAGAGGATGACGTAAGGCTTGAGATCGCCGTGACGCCAGTTG
JMSF038C07+           CGGCGGTCGGGGTCAATCCAGAGGATGACGTAAGGCTTGAGATCGCCGTGACGCCAGTTG
                      ____________________________________________________________
consensus             CGGCGGTCGGGGTCAATCCAGAGGATGACGTAAGGCTTGAGATCGCCGTGACGCCAGTTG
 
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JMFN025E14+           ACGTTCTTCAGGTGCTTGGCGGAGACGACGGTGACGTCTACATCGTAGGATTTCGCCGGA
JMSF015J01+           ACGTTCTTCAGGTGCTTGGCGGAGACGACGGTGACGTCTACATCGTAGGATTTCGCCGGA
JMSF038C07+           ACGTTCTTCAGGTGCTTGGCGGAGACGACGGTGACGTCTACATCGTAGGATTTCGCCGGA
                      ____________________________________________________________
consensus             ACGTTCTTCAGGTGCTTGGCGGAGACGACGGTGACGTCTACATCGTAGGATTTCGCCGGA
 
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JMFN025E14+           GGTCGAGCGCCTGCGGTGGCCATGACGGTCTAGTGACGCGAGCG                
JMSF015J01+           GGTCGAGCGCCTGCGGTGGCCATGACGGTCTAGTGACGCGAGCGTGGAGGTGTGAAGC  
JMSF038C07+           GGTCGAGCGCCTGCGGTGGCCATGACGGTCTAGTGACGCGAGCGTGGAGGTGTGAAGCGC
                      ____________________________________________________________
consensus             GGTCGAGCGCCTGCGGTGGCCATGACGGTCTAGTGACGCGAGCGTGGAGGTGTGAAGCGC