Contig 005218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005N15Sequence493005218 (7)ref|XP_009614819.1|137PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]746001393 (4)ref|XP_004230911.1|256PREDICTED: uncharacterized protein LOC101253631 [Solanum lycopersicum] ref|XP_01
JMFF012A19Sequence489005218 (7)ref|XP_009614819.1|149PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]702001393 (4)ref|XP_009765056.1|5e-29PREDICTED: flocculation protein FLO11 [Nicotiana sylvestris] ref|XP_009765062.1|
JMSF002E01Sequence393005218 (7)ref|XP_009614819.1|83.2PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]
JMSF012O01Sequence376005218 (7)ref|XP_009614819.1|67.8PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]748001548 (5)ref|XP_004229706.1|9e-91PREDICTED: ras-related protein RABH1b [Solanum lycopersicum]
JMSF028O03Sequence665005218 (7)ref|XP_009614819.1|187PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]744001393 (4)ref|XP_009765056.1|7e-32PREDICTED: flocculation protein FLO11 [Nicotiana sylvestris] ref|XP_009765062.1|
JMSF035K04Sequence681005218 (7)ref|XP_009614819.1|191PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]712001393 (4)ref|XP_004230911.1|264PREDICTED: uncharacterized protein LOC101253631 [Solanum lycopersicum] ref|XP_01
JMSF037M16Sequence692005218 (7)ref|XP_009614819.1|191PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis]725019390ref|XP_009765056.1|8e-42PREDICTED: flocculation protein FLO11 [Nicotiana sylvestris] ref|XP_009765062.1|

Alignment

This contig is upended


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JMSF035K04+                                ACAGAAGGCACTGATGAAGGCAACTTTGCAGGAGATTGA
JMSF028O03+                                                              GGAGATTGA
JMSF037M16+                                       GCACTGATGAAGGCAACTTTGCAGGAGATTGA
                      ____________________________________________________________
consensus                                  ACAGAAGGCACTGATGAAGGCAACTTTGCAGGAGATTGA
 
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JMSF035K04+           TAAGATACTGCAGGCAATCTTGTTGACTCTATTACCTCAGTAGAGTTCACAGCCGCCGAA
JMSF028O03+           TAAGATACTGCAGGCAATCTTGTTGACTCTATTACCTCAGTAGAGTTCACAGCCGCCGAA
JMSF037M16+           TAAGATACTGCAGGCAATCTTGTTGACTCTATTACCTCAGTAGAGTTCACAGCCGCCGAA
                      ____________________________________________________________
consensus             TAAGATACTGCAGGCAATCTTGTTGACTCTATTACCTCAGTAGAGTTCACAGCCGCCGAA
 
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JMSF035K04+           GGATCTGATGAAGGTTGTGCCATACTTCCACCATTTCTTTCTGAAGTAGGTGACTTCTGC
JMSF028O03+           GGATCTGATGAAGGTTGTGCCATACTTCCACCATTTCTTTCTGAAGTAGGTGACTTCTGC
JMSF037M16+           GGATCTGATGAAGGTTGTGCCATACTTCCACCATTTCTTTCTGAAGTAGGTGACTTCTGC
                      ____________________________________________________________
consensus             GGATCTGATGAAGGTTGTGCCATACTTCCACCATTTCTTTCTGAAGTAGGTGACTTCTGC
 
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JMSF035K04+           CATGCAAGTGACCTGAAGCTATCCAATGGGCTTCCCTCTTCAGAGGCATATACTGTTTCT
JMFF012A19+                              TATCCAATGGGCTTCCCTCTTCAGAGGCATATACTGTTTCT
JMFF005N15+                                                 TTCAGAGGCATATACTGTTTCT
JMSF028O03+           CATGCAAGTGACCTGAAGCTATCCAATGGGCTTCCCTCTTCAGAGGCATATACTGTTTCT
JMSF037M16+           CATGCAAGTGACCTGAAGCTATCCAATGGGCTTCCCTCTTCAGAGGCATATACTGTTTCT
                      ____________________________________________________________
consensus             CATGCAAGTGACCTGAAGCTATCCAATGGGCTTCCCTCTTCAGAGGCATATACTGTTTCT
 
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JMSF035K04+           ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
JMFF012A19+           ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
JMFF005N15+           ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
JMSF028O03+           ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
JMSF037M16+           ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
                      ____________________________________________________________
consensus             ACAGTTGTCCTAGACTTAAAATCAAATCTATCATTACCACTAATTCCATCAGAAGACCAA
 
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JMSF035K04+           TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
JMFF012A19+           TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
JMFF005N15+           TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
JMSF002E01+                                  TACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
JMSF028O03+           TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
JMSF012O01+                                                      ACCGGAAGCTCCATGAT
JMSF037M16+           TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
                      ____________________________________________________________
consensus             TTCAGTGATACGTCTTCCCCTGCTACTCGCCCTCGATTATCCCACCGGAAGCTCCATGAT
 
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JMSF035K04+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMFF012A19+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMFF005N15+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMSF002E01+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMSF028O03+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMSF012O01+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
JMSF037M16+           GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
                      ____________________________________________________________
consensus             GGTGAATATCTGACATTCCTCTGCAAAACTTCACTGGTTGATCCATTTGTTACTGTTCTA
 
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JMSF035K04+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMFF012A19+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMFF005N15+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMSF002E01+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMSF028O03+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMSF012O01+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
JMSF037M16+           TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
                      ____________________________________________________________
consensus             TCTCTTGCAGCTACAGAACAAGCAGATCCCATGCTCACATACAAAGAGTAAAATCTATTG
 
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JMSF035K04+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMFF012A19+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMFF005N15+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMSF002E01+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMSF028O03+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMSF012O01+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
JMSF037M16+           GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
                      ____________________________________________________________
consensus             GTTGCAAGCTGTCAACCAATAAACATTCCACAAAACAATAAATAGTATACCACAAATATG
 
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JMSF035K04+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMFF012A19+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMFF005N15+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMSF002E01+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMSF028O03+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMSF012O01+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
JMSF037M16+           GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
                      ____________________________________________________________
consensus             GAGTAGCGTCCGTATAGAAAGAGCAAATTGAAAGAAGGTGAACGAAGGATATGGATTCGC
 
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JMSF035K04+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMFF012A19+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMFF005N15+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMSF002E01+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMSF028O03+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMSF012O01+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
JMSF037M16+           CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
                      ____________________________________________________________
consensus             CCGCCGATCGGAGGCCGGCGAGAGACAGTCGTAGTCGGAAGCTGGGAAAGTGGGGTGGGT
 
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JMSF035K04+           GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCT                   
JMFF012A19+           GTGAAAATGTAGAAAGAGAAACTAGAGT                                
JMFF005N15+           GTGAAAATGTAGAAAGAGAAACTAGTGTGAGAAAATGTTCTGATTAT             
JMSF002E01+           GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCTGATTATTCA          
JMSF028O03+           GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCTGATTATTCA          
JMSF012O01+           GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCTGATTATTCA          
JMSF037M16+           GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCTGATTATTCAGCGGCTCATC
                      ____________________________________________________________
consensus             GTGAAAATGTAGAAAGAGAAACTAGAGTGAGAAAATGTTCTGATTATTCAGCGGCTCATC