Contig 005215:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF020A19-                                                TGGNTGGATCCCCCTTTATAAC
                      ____________________________________________________________
consensus                                                   TGGNTGGATCCCCCTTTATAAC
 
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rJMFF020A19-          TTCTTTTTGTCTCCTTTCCTCCTCTTTTGCCTTGTTATCCATGTAAACAAGCCAGCCATA
                      ____________________________________________________________
consensus             TTCTTTTTGTCTCCTTTCCTCCTCTTTTGCCTTGTTATCCATGTAAACAAGCCAGCCATA
 
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rJMFF020A19-          TCTCTTCACTCCAAATTCTTTTGCAACTGACTCCATTGCTTCATCGTTGCTATCATCACT
                      ____________________________________________________________
consensus             TCTCTTCACTCCAAATTCTTTTGCAACTGACTCCATTGCTTCATCGTTGCTATCATCACT
 
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rJMFF020A19-          ATTAAAATCCTCCTCTTCCTCCTCTTCATCATCACCATCTTCCTCAGCATCTGAATAATG
                      ____________________________________________________________
consensus             ATTAAAATCCTCCTCTTCCTCCTCTTCATCATCACCATCTTCCTCAGCATCTGAATAATG
 
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rJMFF020A19-          AGTCTCATCTTTTATTTCACCATCATAAGAGAAACCCACTTGGGAATAAGATCCCTTGCT
                      ____________________________________________________________
consensus             AGTCTCATCTTTTATTTCACCATCATAAGAGAAACCCACTTGGGAATAAGATCCCTTGCT
 
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rJMFF020A19-          TGTTGAAGGCTGTGTTACTTGAGGTCTGTCTGCGCCAAATAGAGCAGCAGTCTTAGCCTC
JMSF037G18+                                       TCTGCGCCAAATAGAGCAGCAGTCTTAGCCTC
                      ____________________________________________________________
consensus             TGTTGAAGGCTGTGTTACTTGAGGTCTGTCTGCGCCAAATAGAGCAGCAGTCTTAGCCTC
 
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rJMFF020A19-          CATCTCTTGGTTTACATGTTGCAACCCCTCTTCATCATTAACGACATCCTCTACGCCGAT
JMFS124C11+                    GTTTACATGTTGCAACCCCTCTTCATCATTAA----ATCCTNTACGCCGAT
JMSF037G18+           CATCTCTTGGTTTACATGTTGCAACCCCTCTTCATCATTAA----ATCCTCTACGCCGAT
                      ____________________________________________________________
consensus             CATCTCTTGGTTTACATGTTGCAACCCCTCTTCATCATTAA----ATCCTCTACGCCGAT
 
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rJMFF020A19-          GCTTAATTAAGTCCCGATAACGCTCAAAATTAACAAACTCTTCTAGTTCTTCTTCCTCTT
JMFS124C11+           GCTTAATTAAGTCCCGATAACGCTCAAAATTAACAAACTCTTCTAGTTCTTCTTCCTCTT
JMSF037G18+           GCTTAATTAAGTCCCGATAACGCTCAAAATTAACAAACTCTTCTAGTTCTTCTTCCTCTT
                      ____________________________________________________________
consensus             GCTTAATTAAGTCCCGATAACGCTCAAAATTAACAAACTCTTCTAGTTCTTCTTCCTCTT
 
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rJMFF020A19-          CAGTTCTTTGTGGAGCCCGAAAATGTCGGGAACTGGTATCCCGGATGAAATCAAGAAGAG
JMFF020A19+                                                    CGGATGAAATCAAGAAGAG
JMFS124C11+           CAGTTCTTTGTGGAGCCCGAAAATGTCGGGAACTGGTATCCCGGATGAAATCAAGAAGAG
JMSF037G18+           CAGTTCTTTGTGGAGCCCGAAAATGTCGGGAACTGGTATCCCGGATGAAATCAAGAAGAG
                      ____________________________________________________________
consensus             CAGTTCTTTGTGGAGCCCGAAAATGTCGGGAACTGGTATCCCGGATGAAATCAAGAAGAG
 
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rJMFF020A19-          CACGCCCATCAAATCTGTCTATCAGAATATCCTGCTTGCCATTCCAAGGTATCAGTCCTT
JMFF020A19+           CACGCCCATCAAATCTGTCTATCAGAATATCCTGCTTGCCATTCCAAGGTATCAGTCCTT
JMFS124C11+           CACGCCCATCAAATCTGTCTATCAGAATATCCTGCTTGCCATTCCAAGGTATCAGTCCTT
JMSF037G18+           CACGCCCATCAAATCTGTCTATCAGAATATCCTGCTTGCCATTCCAAGGTATCAGTCCTT
                      ____________________________________________________________
consensus             CACGCCCATCAAATCTGTCTATCAGAATATCCTGCTTGCCATTCCAAGGTATCAGTCCTT
 
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rJMFF020A19-          GCTGATCCTCCGTAGCTTGATAAATAGCATCATCGCGGTGGATGCGACAGCGGGAGCCGA
JMFF020A19+           GCTGATCCTCCGTAGCTTGATAAATAGCATCATCGCGGTGGATGCGACAGCGGGAGCCGA
JMFS124C11+           GCTGATCCTCCGTAGCTTGATAAACAGCATCATCGCGGTGGATGCGACAGCGGGAGCCGA
JMSF037G18+           GCTGATCCTCCGTAGCTTGATAAACAGCATCATCGCGGTGGATGCGACAGCGGGAGCCGA
                      ____________________________________________________________
consensus             GCTGATCCTCCGTAGCTTGATAAATAGCATCATCGCGGTGGATGCGACAGCGGGAGCCGA
 
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rJMFF020A19-          TGGCCTGGATGGATTGCTGAGGGTCGCCGCGCCGCTTGGCCAGGTAGATGGCTCGCCGCT
JMFF020A19+           TGGCCTGGATGGATTGCTGAGGGTCGCCGCGCCGCTTGGCCAGGTAGATGGCTCGCCGCT
JMFS124C11+           TGGCCTGGATGGATTGCTGAGGGTCGCCGCGCCGCTTGGCCAGGTAGATGGCTCGCCGCT
JMSF037G18+           TGGCCTGGATGGATTGCTGAGGGTCGCCGCGCCGCTTGGCCAGGTAGATGGCTCGCCGCT
                      ____________________________________________________________
consensus             TGGCCTGGATGGATTGCTGAGGGTCGCCGCGCCGCTTGGCCAGGTAGATGGCTCGCCGCT
 
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rJMFF020A19-          GCGCTCTCTTCCGAGCGGCGTCCATCATGTCGTGGACTTTCCTCTCCGACCTCCGTGCTT
JMFF020A19+           GCGCTCTCTTCCGAGCGGCGTCCATCATGTCGTGGACTTTCCTCTCCGACCTCCGTGCTT
JMFS124C11+           GCGCTCTCTTCCGAGCGGCGTCCATCATGTCGTGGACTTTCCTCTCCGACCTCCGTGCTT
JMSF037G18+           GCGCTCTCTTCCGAGCGGCGTCC---ATGTCGTGGACTTTCCTCTCCGACCTCCGTGCTT
                      ____________________________________________________________
consensus             GCGCTCTCTTCCGAGCGGCGTCCATCATGTCGTGGACTTTCCTCTCCGACCTCCGTGCTT
 
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rJMFF020A19-          CGTGNCACATCTTTCCTC                                          
JMFF020A19+           CGTGCCACATCTTTCCTCAGATTTTCGAATCGTAAAAATTTTCCAGATTTCGTTAGATTT
JMFS124C11+           CGTGCCACATCTTTCCTCAGATTTTCGAATCGTAAAAATTTTCCAGATTTCGTTAGATTT
JMSF037G18+           CGTGCCACATCTTTCCTCAGATTTTCGAATCGTAAAAATTTTCCAGATTTCGTTAGATTT
                      ____________________________________________________________
consensus             CGTGCCACATCTTTCCTCAGATTTTCGAATCGTAAAAATTTTCCAGATTTCGTTAGATTT
 
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JMFF020A19+           GATGCTTGTATTCGCGAAAGAGAAACAGGGCAGGGAGATTCATCAATGGAACTCCTGACA
JMFS124C11+           GATGCTTGTATTCGCGAAAGAGAAACAGGGCAGGGAGATTCATCAATGGAACTCCTGACA
JMSF037G18+           GATGCTTGTATTCGCGAAAGAGAAACAGGGCAGGGAGATTCATCAATGGAACTCCTGACA
                      ____________________________________________________________
consensus             GATGCTTGTATTCGCGAAAGAGAAACAGGGCAGGGAGATTCATCAATGGAACTCCTGACA
 
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JMFF020A19+           ACCTCGACCCGAAC                                              
JMFS124C11+           ACCTCGACCCGAACCCTCTCGGGGAGTGATCCTAA                         
JMSF037G18+           ACCTCGACCCGAACCCTCTCGGGGAGTGATCCTAATAGCTTCTGCTATCAACATTCAACC
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consensus             ACCTCGACCCGAACCCTCTCGGGGAGTGATCCTAATAGCTTCTGCTATCAACATTCAACC