| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017K04 | Sequence | 513 | 005213 (10) | gb|AEI69673.1| | 9e-93 | heme oxygenase 1 [Nicotiana tabacum] | 698 | 005213 (10) | ref|XP_009602421.1| | 253 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana tomentosiformis] |
| JMFF037I13 | Sequence | 470 | 005213 (10) | ref|XP_009757175.1| | 254 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana sylvestris] | 725 | 005213 (10) | ref|XP_009602421.1| | 238 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana tomentosiformis] |
| JMFF041E24 | Sequence | 626 | 005213 (10) | ref|XP_009757175.1| | 189 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana sylvestris] | 621 | 005213 (10) | emb|CAD80091.1| | 2e-63 | putative heme oxygenase 1 [Momordica charantia] |
| JMFS032C07 | Sequence | 493 | 005213 (10) | ref|XP_009757175.1| | 150 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana sylvestris] | |||||
| JMFS041C12 | Sequence | 616 | 005213 (10) | ref|XP_009757175.1| | 202 | PREDICTED: heme oxygenase 1, chloroplastic-like [Nicotiana sylvestris] | |||||
| JMSF037D03 | Sequence | 134 | 005213 (10) | 756 | 005213 (10) | gb|AEI69673.1| | 1e-93 | heme oxygenase 1 [Nicotiana tabacum] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF041E24- AACACTAGAAACCTGAAAAATGATTTGAAATCA
rJMFF017K04- ATTTTCCAGCCTTGTCAACACTAGAAACCTGAAAAATGATTTGAAATCA
rJMSF037D03- AACACTAGAAACCTGAAAAATGATTTGAAATCA
____________________________________________________________
consensus ATTTTCCAGCCTTGTCAACACTAGAAACCTGAAAAATGATTTGAAATCA
. : . : . : . : . : . :
rJMFF041E24- TTTTCCGGGTTCCAAAGATACCCGAGGTTCAAATCCAATTTTGGAATTTGCATATATTAA
rJMFF017K04- TTTTCCGGGTTCCAAAGATACCCGAGGTTCAAATCCAATTTTGGAATTTGCATATATTAA
rJMSF037D03- TTTTCCGGGTTCCAAAGATACCCGAGGTTCAAATCCAATTTTGGAATTTGCATATATTAA
____________________________________________________________
consensus TTTTCCGGGTTCCAAAGATACCCGAGGTTCAAATCCAATTTTGGAATTTGCATATATTAA
. : . : . : . : . : . :
rJMFF041E24- AAATACAGCAGGCAAAGTACTATATACATAGCCTAATAGTGGACAATGGCATCAGCCTGT
rJMFF017K04- AAATACAGCAGGCAAAGTACTATATACATAGCCTAATAGTGGACAATGGCATCAGCCTGT
rJMSF037D03- AAATACAGCAGGCAAAGTACTATATACATAGCCTAATAGTGGACAATGGCATCAGCCTGT
rJMFF037I13- CAGGCAAAGTACTATATACATAGCCTAATAGTGGACAATGGCATCAGCCTGT
____________________________________________________________
consensus AAATACAGCAGGCAAAGTACTATATACATAGCCTAATAGTGGACAATGGCATCAGCCTGT
. : . : . : . : . : . :
rJMFF041E24- GCCATTAAACATACACAA-TAACAGCAGCGGAAGTGCAATTTTCGCTTTGCTTGGACATT
rJMFF017K04- GCCATTAAACATACACAA-TAACAGCAGCGGAAGTGCAATTTTCGCTTTGCTTGGACATT
rJMSF037D03- GCCATTAAACATACACAA-TAACAGCAGCGGAAGTGCAATTTTCGCTTTGCTTGGACATT
rJMFF037I13- GCCATTAAACATACACAAGTAACAGCAGCGGAAGTGCAATTTTCGCTTTGCTTGGACATT
____________________________________________________________
consensus GCCATTAAACATACACAA-TAACAGCAGCGGAAGTGCAATTTTCGCTTTGCTTGGACATT
. : . : . : . : . : . :
rJMFF041E24- ACGAACAGCGCAAGTGAGATTTAACACTCGCTTGGAGATTACGAGGAGAGAATCAAACGG
rJMFF017K04- ACGAACAGCGCAAGTGAGATTTAACACTCGCTTGGAGATTACGAGGAGAGAATCAAACGG
rJMSF037D03- ACGAACAGCGCAAGTGAGATTTAACACTCGCTTGGAGATTACGAGGAGAGAATCAAACGG
rJMFF037I13- ACGAACAGCGCAAGTGAGATTTAACACTCNCTTGGAGATTACGAGGAGAGAATCAAACGG
____________________________________________________________
consensus ACGAACAGCGCAAGTGAGATTTAACACTCGCTTGGAGATTACGAGGAGAGAATCAAACGG
. : . : . : . : . : . :
rJMFF041E24- AGAATATCTCCCGAGAGCTTGAACGACTTCTCTGTCTCCTCGAGACAGTGGTCCTTCTGC
rJMFF017K04- AGAATATCTCCCGAGAGCTTGAACGACTTCTCTGTCTCCTCGAGACAGTGGTCCTTCTGC
rJMSF037D03- AGAATATCTCCCGAGAGCTTGAACGACTTCTCTGTCTCCTCGAGACAGTGGTCCTTCTGC
rJMFF037I13- AGAATATCTCCCGAGAGCTTGAACGACTTCTCTGTCTCCTCGAGACAGTGGTCCTTCTGC
____________________________________________________________
consensus AGAATATCTCCCGAGAGCTTGAACGACTTCTCTGTCTCCTCGAGACAGTGGTCCTTCTGC
. : . : . : . : . : . :
rJMFF041E24- TCTCTGGTCCAGCTATCAGCAACTTTGTTCAGCTTCTCCCTAACATTCTGCAGAAGCTGA
rJMFF017K04- TCTCTGGTCCAGCTATCAGCAACTTTGTTCAGCTTCTCCCTAACATTCTGCAGAAGCTGA
rJMSF037D03- TCTCTGGTCCAGCTATCAGCAACTTTGTTCAGCTTCTCCCTAACATTCTGCAGAAGCTGA
rJMFF037I13- TCTCTGGTCCAGCTATCAGCAACTTTGTTCAGCTTCTCCCTAACATTCTGCAGAAGCTGA
____________________________________________________________
consensus TCTCTGGTCCAGCTATCAGCAACTTTGTTCAGCTTCTCCCTAACATTCTGCAGAAGCTGA
. : . : . : . : . : . :
rJMFF041E24- GAAAGGTCACCGTCCCATTTGTAAAACTCCAACTCTTTCTTGTTCAGTA-TTTTCTCGGC
rJMFF017K04- GAAAGGTCACCGTCCCATTTGTAAAACTCCAACTCTTTCTTGTTCAGTA-TTTTCTCGGC
rJMSF037D03- GAAAGGTCACCGTCCCATTTGTAAAACTCCAACTCTTTCTTGTTCAGTA-TTTTCTCGGC
rJMFF037I13- GAAAGGTCACCGTCCCATTTGTAAAACTCCAACTCTTTCTTGTTCAGNATTTTTCTCGGC
____________________________________________________________
consensus GAAAGGTCACCGTCCCATTTGTAAAACTCCAACTCTTTCTTGTTCAGTA-TTTTCTCGGC
. : . : . : . : . : . :
rJMFF041E24- TACCTTTCTCCCAATCATGCGGCCTCCAGCTGAATGGGCAAAGTATATGTTGTAAAAGTG
rJMFF017K04- TACCTTTCTCCCAATCATGCGGCCTCCAGCTGAATGGGCAAAGTATATGTTGTAAAAGTG
rJMSF037D03- TACCTTTCTCCCAATCATGCGGCCTCCAGCTGAATGGGCAAAGTATATGTTGTAAAAGTG
rJMFF037I13- TACCTTTCTCCCAATCATGCGGCCTCCAGCTGAATGGGCAAAGTATATGTTGTAAAAGTG
____________________________________________________________
consensus TACCTTTCTCCCAATCATGCGGCCTCCAGCTGAATGGGCAAAGTATATGTTGTAAAAGTG
. : . : . : . : . : . :
rJMFF041E24- GCAAAGGAACGCTTGAGGATCGTTCTGTGATAGTTCTTCGAGAATGCGGGCATAGTTGAG
rJMFF017K04- GCAAAGGAACGCTTGAGGATCGTTCTGTGATAGTTCTTCGAGAATGCGGGCATAGTTGAG
rJMSF037D03- GCAAAGGAACGCTTGAGGATCGTTCTGTGATAGTTCTTCGAGAATGCGGGCATAGTTGAG
rJMFF037I13- GCAAAGGAACGCTTGAGGATCGTTCTGTGATAGTTCTTCGAGAATGCGGGCATAGTTGAG
____________________________________________________________
consensus GCAAAGGAACGCTTGAGGATCGTTCTGTGATAGTTCTTCGAGAATGCGGGCATAGTTGAG
. : . : . : . : . : . :
rJMFF041E24- GCCAGGTTCCGATGGCTCGGGAATGGCATGACCCTGC
rJMFF017K04- GCCAGGTTCCGATGGCTCGGGAATGGCATGACCCTGCTGCCTAAACCATTCCAGATCCTT
rJMSF037D03- GCCAGGTTCCGATGGCTCGGGAATGGCATGACCCTGCTGCCTAAACCATTCCAGATCCTT
rJMFF037I13- GCCAGGTTCCGATGGCTCGGGAATGGCATGACCCTGCTGCCTAAACCATTCCAGATCCTT
JMFF017K04+ GGTTCCGATGGCTCGGGAATGGCATGACCCTGCTGCCTAAACCATTCCAGATCCTT
JMFF037I13+ ATTCCAGATCCTT
____________________________________________________________
consensus GCCAGGTTCCGATGGCTCGGGAATGGCATGACCCTGCTGCCTAAACCATTCCAGATCCTT
. : . : . : . : . : . :
rJMFF017K04- TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTC
rJMSF037D03- TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTCAGGAAAAGG
rJMFF037I13- TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTCAGGAAAAGG
JMFF017K04+ TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTCAGGAAAAGG
JMFF037I13+ TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTCAGGAAAAGG
____________________________________________________________
consensus TGCCAGCCTTTCTGACCTTTCCAGACCCGTATTCCTAAATTCAGCATAGTCAGGAAAAGG
. : . : . : . : . : . :
rJMSF037D03- GGCTTTTTCCACAATCTTCTCCAGAGTATCATATACAAATTTGCTGTCC
rJMFF037I13- GGCTTTTTCCACAATCTTCTCCAGAGTATCATATACAAATTTGCTGTCCACCAAGAACTT
JMFF017K04+ GGCTTTTTCCACAATCTTCTCCAGAGTATCATATACAAATTTGCTGTCCACCAAGAACTT
JMFF037I13+ GGCTTTTTCCACAATCTTCTCCAGAGTATCATATACAAATTTGCTGTCCACCAAGAACTT
JMFS041C12+ CCAGAGTATCATATACAAATTTGCTGTCCACCAAGAACTT
JMFF041E24+ GCTGTCCACCAAGAACTT
____________________________________________________________
consensus GGCTTTTTCCACAATCTTCTCCAGAGTATCATATACAAATTTGCTGTCCACCAAGAACTT
. : . : . : . : . : . :
rJMFF037I13- CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCANGCTCTTTCTC
JMFF017K04+ CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCAGGCTCTTTCTC
JMFF037I13+ CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCAGGCTCTTTCTC
JMFS032C07+ TGACCTTCAGGCTCTTTCTC
JMFS041C12+ CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCAGGCTCTTTCTC
JMFF041E24+ CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCAGGCTCTTTCTC
____________________________________________________________
consensus CAAGTACCCTTCAACACTTGGCTCCCATCTAGCCACAGGCTGACCTTCAGGCTCTTTCTC
. : . : . : . : . : . :
rJMFF037I13- CCCCTCCTTAGCC
JMFF017K04+ CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
JMFF037I13+ CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
JMFS032C07+ CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
JMFS041C12+ CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
JMFF041E24+ CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
____________________________________________________________
consensus CCCCTCCTTAGCCTGGTCCCTAGTATGCAGTTTCATAGCCACAAACCTCATCTCCTCCAC
. : . : . : . : . : . :
JMFF017K04+ AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
JMFF037I13+ AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
JMFS032C07+ AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
JMFS041C12+ AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
JMFF041E24+ AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
____________________________________________________________
consensus AAACCCCTTAGCCTCCCCAGGGTACCTCTTCTTGGGCCTCTCTGCCGCAGTTGTAGATGA
. : . : . : . : . : . :
JMFF017K04+ AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
JMFF037I13+ AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
JMFS032C07+ AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
JMFS041C12+ AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
JMFF041E24+ AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
____________________________________________________________
consensus AGCCACCACCATCTTGGAATTTCTCAAGGAAAGCTTTGAACTTTGCTGATTCCTCCCAAC
. : . : . : . : . : . :
JMFF017K04+ GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
JMFF037I13+ GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
JMFS032C07+ GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
JMFS041C12+ GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
JMFF041E24+ GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
____________________________________________________________
consensus GGGCACCGAGAAAATCGGAGCTTGAGGCCTCTTGATCCCTGTAAATTGGGTGTTCTCAAG
. : . : . : . : . : . :
JMFF017K04+ AAAAGGCTGGGACTTGGACAAGGGTGCTATAGAAGCC
JMFF037I13+ AAAAGGNTGGGACTTGGACAAGGGTGCTATAGAAGCC
JMFS032C07+ AAAAGGCTGGGACTTGGACAAGGGTGCTATAGAAGCCATCTCACAAGGGAAGAGTGTTCA
JMFS041C12+ AAAAGGCTGGGACTTGGACAAGGGTGCTATAGAAGCCATCTCACAAGGGAAGAGTGTTCA
JMFF041E24+ AAAAGGCTGGGACTTGGACAAGGGTGCTATAGAAGCCATCTCACAAGGGAAGAGTGTTCA
____________________________________________________________
consensus AAAAGGCTGGGACTTGGACAAGGGTGCTATAGAAGCCATCTCACAAGGGAAGAGTGTTCA
. : . : . : . : . : . :
JMFS032C07+ GATGGGTATATATCGTCAGAGTGAAAATGACAGATTAGCCTTATGTATGATGGAAGAAAC
JMFS041C12+ GATGGGTATATATCGTCAGAGTGAAAATGACAGATTAGCCTTATGTATGATGGAAGAAAC
JMFF041E24+ GATGGGTATATATCGTCAGAGTGAAAATGACAGATTAGCCTTATGTATGATGGAAGAAAC
____________________________________________________________
consensus GATGGGTATATATCGTCAGAGTGAAAATGACAGATTAGCCTTATGTATGATGGAAGAAAC
. : . : . : . : . : . :
JMFS032C07+ CCAAAGCTATTGAATCCTTGTTTGTTTTTTAGTATCTTCAGTTGAGGGTTAGAGTTCCCT
JMFS041C12+ CCAAAGCTATTGAATCCTTGTTTGTTTTTTAGTATCTTCAGTTGAGGGTTAGAGTTCCCT
JMFF041E24+ CCAAAGCTATTGAATCCTTGTTTGTTTTTTAGTATCTTCAGTTGAGGGTTAGAGTTCCCT
____________________________________________________________
consensus CCAAAGCTATTGAATCCTTGTTTGTTTTTTAGTATCTTCAGTTGAGGGTTAGAGTTCCCT
. : . : . : . : . : . :
JMFS032C07+ TCAAGGC-AAGCTATAGACACACAAGTTGTATGTATAGATTGGGTTTTTTTTTT
JMFS041C12+ TCAAGGC-AAGCTATAGACACACAAGTTGTATGTATAGATTGGGTTTTTTTTTTTTAAAA
JMFF041E24+ TCAAGGCAAAGCTATAGACACACAAGTTGTATGTATAGATTGGGTTTTTTTTTTTTAAAA
JMSF037D03+ TTTTTTTTTTAAAA
____________________________________________________________
consensus TCAAGGC-AAGCTATAGACACACAAGTTGTATGTATAGATTGGGTTTTTTTTTTTTAAAA
. : . : . : . : . : . :
JMFS041C12+ AAAAATTGAATCTTTTTGAGAGTGTATGGGAGGGGAG
JMFF041E24+ AAAAATTGAATCTTTTTGAGAGTGTATGGGAGGGGAGTATTGATGAGCGTGTATTATTGT
JMSF037D03+ AAAAATTGAATCTTTTTGAGAGTGTATGGGAGGGGAGTATTGATGAGCGTGTATTATTGT
____________________________________________________________
consensus AAAAATTGAATCTTTTTGAGAGTGTATGGGAGGGGAGTATTGATGAGCGTGTATTATTGT
. : . : . : . : . : . :
JMFF041E24+ TGGGAGCA
JMSF037D03+ TGGGAGCAGCAGGATGTGTCTCCTCCATGGATAAGCTTCTTCATTTCTTTATTGAAGGTC
____________________________________________________________
consensus TGGGAGCAGCAGGATGTGTCTCCTCCATGGATAAGCTTCTTCATTTCTTTATTGAAGGTC