Contig 005207:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS107E12Sequence621005207 (3)ref|XP_009798003.1|1e-16PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nicotiana sylves
JMSF034C02Sequence701005207 (3)ref|XP_009591658.1|7e-60PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nicotiana toment700002931 (2)ref|XP_009591661.1|3e-35PREDICTED: U-box domain-containing protein 35-like isoform X4 [Nicotiana toment
JMSF036K18Sequence693005207 (3)ref|XP_009591658.1|2e-57PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nicotiana toment654002931 (2)ref|XP_009591661.1|5e-26PREDICTED: U-box domain-containing protein 35-like isoform X4 [Nicotiana toment

Alignment

This contig is upended


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JMSF034C02+                              TGGAGCACATGCCAGAGGTCTCGCTGCAGGCCGGAAAGATT
JMSF036K18+                                                  TCGCTGCAGNCCGGAAAGATT
                      ____________________________________________________________
consensus                                TGGAGCACATGCCAGAGGTCTCGCTGCAGGCCGGAAAGATT
 
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JMSF034C02+           GTTGCTTGCCTTTTGAAATTACATACACAGAGCAAAAATCCGGGGCAGTCTTGTTTATGA
JMSF036K18+           GTTGCTTGCCTTTTGAAATTACATACACAGAGCAAAAATCCGGGGCAGTCTTGTTTATGA
                      ____________________________________________________________
consensus             GTTGCTTGCCTTTTGAAATTACATACACAGAGCAAAAATCCGGGGCAGTCTTGTTTATGA
 
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JMSF034C02+           TGGTTGGCACATCATGAGTCCAAAATTTCCTGGCAATAGCGCTCCTTGTTGACGCACCAA
JMSF036K18+           TGGTTGGCACATCATGAGTCCAAAATTTCCTGGCAATAGCGCTCCTTGTTGACGCACCAA
                      ____________________________________________________________
consensus             TGGTTGGCACATCATGAGTCCAAAATTTCCTGGCAATAGCGCTCCTTGTTGACGCACCAA
 
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JMSF034C02+           GAACAATGTTGGAAATGCGGTACTTGTTTATGTACTCCACAAGTGCCTTGGACACATCAC
JMSF036K18+           GAACAATGTTGGAAATGCGGTACTTGTTTATGTACTCCACAAGTGCCTTGGACACATCAC
                      ____________________________________________________________
consensus             GAACAATGTTGGAAATGCGGTACTTGTTTATGTACTCCACAAGTGCCTTGGACACATCAC
 
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JMSF034C02+           TATCCTCAACAATAACCTCTTTCACTATCAACCCTTTACGTGCAGAGTATGCGCGGAAGG
JMFS107E12+                                          CCCTTTACGTGCAGAGTATGCGCGGAAGG
JMSF036K18+           TATCCTCAACAATAACCTCTTTCACTATCAACCCTTTACGTGCAGAGTATGCGCGGAAGG
                      ____________________________________________________________
consensus             TATCCTCAACAATAACCTCTTTCACTATCAACCCTTTACGTGCAGAGTATGCGCGGAAGG
 
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JMSF034C02+           GTGTAAAAACGGATTGGGAATCCTGATCGCTTGCTCCACCATTTGCATCTGGAGAAGAAT
JMFS107E12+           GTGTAAAAACGGATTGGGAATCCTGATCGCTTGCTCCACCATTTGCATCTGGAGAAGAAT
JMSF036K18+           GTGTAAAAACGGATTGGGAATCCTGATCGCTTGCTCCACCATTTGCATCTGGAGAAGAAT
                      ____________________________________________________________
consensus             GTGTAAAAACGGATTGGGAATCCTGATCGCTTGCTCCACCATTTGCATCTGGAGAAGAAT
 
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JMSF034C02+           TATGGTGTGCTGAGCTTTTGGTCCGGACGTGGACCAGGATGAGAGTGATATTGTTGTTGA
JMFS107E12+           TATGGTGTGCTGAGCTTTTGGTCCGGACGTGGACCAGGATGAGAGTGATATTGTTGTTGA
JMSF036K18+           TATGGTGTGCTGAGCTTTTGGTCCGGACGTGGACCAGGATGAGAGTGATATTGTTGTTGA
                      ____________________________________________________________
consensus             TATGGTGTGCTGAGCTTTTGGTCCGGACGTGGACCAGGATGAGAGTGATATTGTTGTTGA
 
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JMSF034C02+           CGAGGAGACAATCGACCGCCCATTTCACGGCGGAGGCGCTGTGCTTGTCTTTGTCGACCG
JMFS107E12+           CGAGGAGACAATCGACCGCCCATTTCACGGCGGAGGCGCTGTGCTTGTCTTTGTCGACCG
JMSF036K18+           CGAGGAGACAATCGACCGCCCATTTCACGGCGGAGGCGCTGTGCTTGTCTTTGTCGACCG
                      ____________________________________________________________
consensus             CGAGGAGACAATCGACCGCCCATTTCACGGCGGAGGCGCTGTGCTTGTCTTTGTCGACCG
 
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JMSF034C02+           CGACGACGGTGAGAATGCCGCCGCCAACGGCGGCGTCGGGGGGAAGTTGGGGAGCCATTA
JMFS107E12+           CGACGACGGTGAGAATGCCGCCGCCAACGGCGGCGTCGGGGGGAAGTTGGGGAGCCATTA
JMSF036K18+           CGACGACGGTGAGAATGCCGCCGCCAACGGCGGCGTCGGGGGGAAGTTGGGGAGCCATTA
                      ____________________________________________________________
consensus             CGACGACGGTGAGAATGCCGCCGCCAACGGCGGCGTCGGGGGGAAGTTGGGGAGCCATTA
 
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JMSF034C02+           TATTATGGCGTGATGATCATAAAATTAATCGAATAAGCAACGGGGGCAGGGTTAATTAAG
JMFS107E12+           TATTATGGCGTGATGATCATAAAATTAATCGAATAAGCAACGGGGGCAGGGTTAATTAAG
JMSF036K18+           TATTATGGCGTGATGATCATAAAATTAATCGAATAAGCAACGGGGGCAGGGTTAATTAAG
                      ____________________________________________________________
consensus             TATTATGGCGTGATGATCATAAAATTAATCGAATAAGCAACGGGGGCAGGGTTAATTAAG
 
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JMSF034C02+           TAATTGGACAGCGCGCCACCACTCACCAGCCGATGAGGACTAGCTCCGCCGCTCCCACAC
JMFS107E12+           TAATTGGACAGCGCGCCACCACTCACCAGCCGATGAGGACTAGCTCCGCCGCTCCCACAC
JMSF036K18+           TAATTGGACAGCGCGCCACCACTCACCAGCCGATGAGGACTAGCTCCGCCGCTCCCACAC
                      ____________________________________________________________
consensus             TAATTGGACAGCGCGCCACCACTCACCAGCCGATGAGGACTAGCTCCGCCGCTCCCACAC
 
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JMSF034C02+           CCGCCACCGCCACCGCTTCCACTGGCTCTTTTAGGGATTAAAAAACAAGGAGAGAGCGCC
JMFS107E12+           CCGCCACCGCCACCGCTTCCACTGGCTCTTTTAGGGATT                     
JMSF036K18+           CCGCCACCGCCACCGCTTCCACTGGCTCTTTTAGGGATTAAAAAACAAGGAGAGAGCGCC
                      ____________________________________________________________
consensus             CCGCCACCGCCACCGCTTCCACTGGCTCTTTTAGGGATTAAAAAACAAGGAGAGAGCGCC