| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF020A14 | Sequence | 716 | 005202 (3) | ref|XP_009604417.1| | 2e-64 | PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis] | 434 | 001420 (3) | ref|XP_011101591.1| | 1e-23 | PREDICTED: probable receptor protein kinase TMK1 [Sesamum indicum] |
| JMSF033C16 | Sequence | 675 | 005202 (3) | ref|XP_009604417.1| | 1e-66 | PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis] | 614 | 001420 (3) | ref|XP_011101591.1| | 6e-62 | PREDICTED: probable receptor protein kinase TMK1 [Sesamum indicum] |
| JMSF035O04 | Sequence | 668 | 005202 (3) | ref|XP_009604417.1| | 7e-59 | PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis] | 596 | 001420 (3) | ref|XP_011101591.1| | 1e-58 | PREDICTED: probable receptor protein kinase TMK1 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF033C16+ ATGACGCCGGTGATACTGGCGTTGCTCGCGAAGAAAGATCCCAAGCTTGTG
JMSF020A14+ TAGGNATGACGCCGGTGATACTGGCGTTGCTCGCGAAGAAAGATCCCAAGCTTGTG
JMSF035O04+ AGCTTGTG
____________________________________________________________
consensus TAGGNATGACGCCGGTGATACTGGCGTTGCTCGCGAAGAAAGATCCCAAGCTTGTG
. : . : . : . : . : . :
JMSF033C16+ CTTTCGGCCAAATAACTAGAAATTTGCCATGGGCTGAGCTCGCCATTGTCGGAAATGCTG
JMSF020A14+ CTTTCGNCCAAATAACTAGAAATTTGCCATGGGCTGAGCTCGCCATNGTCGGAAATGCTG
JMSF035O04+ CTTTCGGCCAAATAACTAGAAATTTGCCATGGGCTGAGCTCGCCATTGTCGGAAATGCTG
____________________________________________________________
consensus CTTTCGGCCAAATAACTAGAAATTTGCCATGGGCTGAGCTCGCCATTGTCGGAAATGCTG
. : . : . : . : . : . :
JMSF033C16+ AAAATCCGCAAATTGGGAAGACCCAAGAGGAAATCTGGGGGGATTGAGCTGAACTCATTG
JMSF020A14+ AAAATCCGCAAATTGGGAAGACCCAAGAGGAAATCTGGGGGGATTGAGCTGAACTCATTG
JMSF035O04+ AAAATCCGCAAATTGGGAAGACCCAAGAGGAAATCTGGGGGGATTGAGCTGAACTCATTG
____________________________________________________________
consensus AAAATCCGCAAATTGGGAAGACCCAAGAGGAAATCTGGGGGGATTGAGCTGAACTCATTG
. : . : . : . : . : . :
JMSF033C16+ CTGTCTAAGTAGAGCTCTTCGAGGCTGGACATATTAGCGAAAGACGGCAAGGGCCCGGAG
JMSF020A14+ CTGTCTAAGTAGAGCTCTTCGAGGCTGGACATATTAGCGAAAGACGGCAAGGGCCCGGAG
JMSF035O04+ CTGTCTAAGTAGAGCTCTTCGAGGCTGGACATATTAGCGAAAGACGGCAAGGGCCCGGAG
____________________________________________________________
consensus CTGTCTAAGTAGAGCTCTTCGAGGCTGGACATATTAGCGAAAGACGGCAAGGGCCCGGAG
. : . : . : . : . : . :
JMSF033C16+ AGGGAGTTTTTCTGGACGGAAAGTGATCGGAGAGACGCCAGCTGTGTGAGCTCAGAAGGG
JMSF020A14+ AGGGAGTTTTTCTGGACGGAAAGTGATCGGAGAGACGCCAGCTGTGTGAGCTCAGAAGGG
JMSF035O04+ AGGGAGTTTTTCTGGACGGAAAGTGATCGGAGAGACGCCAGCTGTGTGAGCTCAGAAGGG
____________________________________________________________
consensus AGGGAGTTTTTCTGGACGGAAAGTGATCGGAGAGACGCCAGCTGTGTGAGCTCAGAAGGG
. : . : . : . : . : . :
JMSF033C16+ AGATTGCCGGAGATGGACTGGGAGTCGATGTTGATGGAGACCACATTGCCGGTGGGCTTG
JMSF020A14+ AGATTGCCGGAGATGGACTGGGAGTCGATGTTGATGGAGACCACATTGCCGGTGGGCTTG
JMSF035O04+ AGATTGCCGGAGATGGACTGGGAGTCGATGTTGATGGAGACCACATTGCCGGTGGGCTTG
____________________________________________________________
consensus AGATTGCCGGAGATGGACTGGGAGTCGATGTTGATGGAGACCACATTGCCGGTGGGCTTG
. : . : . : . : . : . :
JMSF033C16+ TCGCAGTTGACATTAGTCCAAGTACACGGATCTTTGGAAGCGGACCAGCCAGAAGGCGCC
JMSF020A14+ TCGCAGTTGACATTAGTCCAAGTACACGGATCTTTGGAAGCGGACCAGCCAGAAGGCGCC
JMSF035O04+ TCGCAGTTGACATTAGTCCAAGTACACGGATCTTTGGAAGCGGACCAGCCAGAAGGCGCC
____________________________________________________________
consensus TCGCAGTTGACATTAGTCCAAGTACACGGATCTTTGGAAGCGGACCAGCCAGAAGGCGCC
. : . : . : . : . : . :
JMSF033C16+ GGAGAGAGGGCAGCTAAGAGCTTGGACATGACGGCGGCGTCATCGCAAAATGAAACAGAG
JMSF020A14+ GGAGAGAGGGCAGCTAAGAGCTTGGACATGACGGCGGCGTCATCGCAAAATGAAACAGAG
JMSF035O04+ GGAGAGAGGGCAGCTAAGAGCTTGGACATGACGGCGGCGTCATCGCAAAATGAAACAGAG
____________________________________________________________
consensus GGAGAGAGGGCAGCTAAGAGCTTGGACATGACGGCGGCGTCATCGCAAAATGAAACAGAG
. : . : . : . : . : . :
JMSF033C16+ AGCAGGCCGAGTAAGAGGAGTAAACGGAGAAAGGATGGAGCTTTCTGGGAGGACATTGCA
JMSF020A14+ AGCAGGCCGAGTAAGAGGAGTAAACGGAGAAAGGATGGAGCTTTCTGGGAGGACATTGCA
JMSF035O04+ AGCAGGCCGAGTAAGAGGAGTAAACGGAGAAAGGATGGAGCTTTCTGGGAGGACATTGCA
____________________________________________________________
consensus AGCAGGCCGAGTAAGAGGAGTAAACGGAGAAAGGATGGAGCTTTCTGGGAGGACATTGCA
. : . : . : . : . : . :
JMSF033C16+ GGTGGGGTTTAGTTTCGTGGCGGAGGAAGCATATAAGGTTGGGTGGTACACGGCGGCGGT
JMSF020A14+ GGTGGGGTTTAGTTTCGTGGCGGAGGAAGCATATAAGGTTGGGTGGTACACGGCGGCGGT
JMSF035O04+ GGTGGGGTTTAGTTTCGTGGCGGAGGAAGCATATAAGGTTGGGTGGTACACGGCGGCGGT
____________________________________________________________
consensus GGTGGGGTTTAGTTTCGTGGCGGAGGAAGCATATAAGGTTGGGTGGTACACGGCGGCGGT
. : . : . : . : . : . :
JMSF033C16+ GGTGGTGGTGGCGCGGTATGAATTTTGGAATTTGAAAAGACTTTTAAAAAGTTAGAGAAG
JMSF020A14+ GGTGGTGGTGGCGCGGTATGAATTTTGGAATTTGAAAAGACTTTTAAAAAGTTAGAGAAG
JMSF035O04+ GGTGGTGGTGGCGCGGTATGAATTTTGGAATTTGAAAAGACTTTTAAAAAGTTAGAGAAG
____________________________________________________________
consensus GGTGGTGGTGGCGCGGTATGAATTTTGGAATTTGAAAAGACTTTTAAAAAGTTAGAGAAG
. : . : . : . : . : . :
JMSF033C16+ AAAAGAAAAGCGTATGTTC
JMSF020A14+ AAAAGAAAAGCGTATGTTCTGGTGGTTTATCATGTTCTTGAAGGATTTATGCTTATG
JMSF035O04+ AAAAGAAAAGCGTATGTTCTGGTGGTTTATCATGTTCTTGAAGGATTTATGCTTATGGTC
____________________________________________________________
consensus AAAAGAAAAGCGTATGTTCTGGTGGTTTATCATGTTCTTGAAGGATTTATGCTTATGGTC