clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003C10 | Sequence | 507 | 005201 (3) | ref|XP_004240685.1| | 6e-29 | PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum] | 681 | 008321 (3) | ref|XP_009631909.1| | 1e-86 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
JMFF043E19 | Sequence | 641 | 005201 (3) | gb|EPS67652.1| | 9e-56 | hypothetical protein M569_07122 [Genlisea aurea] | 633 | 008321 (3) | ref|XP_009631909.1| | 8e-76 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
JMSF035M16 | Sequence | 645 | 005201 (3) | gb|EPS67652.1| | 9e-56 | hypothetical protein M569_07122 [Genlisea aurea] | 610 | 008321 (3) | ref|XP_009631909.1| | 4e-72 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF043E19+ GAGAAAAAACATCATTAACCAAAACACCCAGAGATGAACCTCCAT
JMSF035M16+ GAGAAAAAACATCATTAACCAAAACACCCAGAGATGAACCTCCAT
____________________________________________________________
consensus GAGAAAAAACATCATTAACCAAAACACCCAGAGATGAACCTCCAT
. : . : . : . : . : . :
JMFF043E19+ CTGCATACTCAACATCATAGTCACATTGCGTTGGAGACTCACACGTGTAGTCGCCCACAT
JMSF035M16+ CTGCATACTCAACATCATAGTCACATTGCGTTGGAGACTCACACGTGTAGTCGCCCACAT
____________________________________________________________
consensus CTGCATACTCAACATCATAGTCACATTGCGTTGGAGACTCACACGTGTAGTCGCCCACAT
. : . : . : . : . : . :
JMFF043E19+ GCAAAGAGGCACAAAGGGGATCCTTGCAAATCACAAGGTCATTGTTGGGCTTGTACAAAG
JMFF003C10+ ATCACAAGGTCATTGTTGGGCTTGTACAAAG
JMSF035M16+ GCAAAGAGGCACAAAGGGGATCCTTGCAAATCACAAGGTCATTGTTGGGCTTGTACAAAG
____________________________________________________________
consensus GCAAAGAGGCACAAAGGGGATCCTTGCAAATCACAAGGTCATTGTTGGGCTTGTACAAAG
. : . : . : . : . : . :
JMFF043E19+ GGTGAGGTGCCTTTGTGCAATGGACACAAGGAGCGTCACATTGAAGCCATGTAAGATCAC
JMFF003C10+ GGTGAGGTGCCTTTGTGCAATGGACACAAGGAGCGTCACATTGAAGCCATGTAAGATCAC
JMSF035M16+ GGTGAGGTGCCTTTGTGCAATGGACACAAGGAGCGTCACATTGAAGCCATGTAAGATCAC
____________________________________________________________
consensus GGTGAGGTGCCTTTGTGCAATGGACACAAGGAGCGTCACATTGAAGCCATGTAAGATCAC
. : . : . : . : . : . :
JMFF043E19+ TGCCAGTATCAGGATCAACAAAATAGGGCCTTGGAGGATTCCCTATATCCACTTGGGCAA
JMFF003C10+ TGCCAGTATCAGGATCAACAAAATAGGGCCTTGGAGGATTCCCTATATCCACTTGGGCAA
JMSF035M16+ TGCCAGTATCAGGATCAACAAAATAGGGCCTTGGAGGATTCCCTATATCCACTTGGGCAA
____________________________________________________________
consensus TGCCAGTATCAGGATCAACAAAATAGGGCCTTGGAGGATTCCCTATATCCACTTGGGCAA
. : . : . : . : . : . :
JMFF043E19+ AGTAAAATCCGTTTGGATAAACGTTGCCATACAGTGGCAGAACAATCGAAGACGGCCCAC
JMFF003C10+ AGTAAAATCCGTTTGGATAAACGTTGCCATACAGTGGCAGAACAATCGAAGACGGCCCAC
JMSF035M16+ AGTAAAATCCGTTTGGATAAACGTTGCCATACAGTGGCAGAACAATCGAAGACGGCCCAC
____________________________________________________________
consensus AGTAAAATCCGTTTGGATAAACGTTGCCATACAGTGGCAGAACAATCGAAGACGGCCCAC
. : . : . : . : . : . :
JMFF043E19+ CCCGACTAACCACCGGGGATGAGGACGAAGACGAGGACGAGGACGAGGACGAGGACGAGG
JMFF003C10+ CCCGACTAACCACCGGGGATGAGGACGAAGACGAGGACGAGGACGAGGACGAGGACGAGG
JMSF035M16+ CCCGACTAACCACCGGGGATGAGGACGAAGACGAGGACGAGGACGAGGACGAGGACGAGG
____________________________________________________________
consensus CCCGACTAACCACCGGGGATGAGGACGAAGACGAGGACGAGGACGAGGACGAGGACGAGG
. : . : . : . : . : . :
JMFF043E19+ ACGCTCCATCAGAGCCAGGAGATGGCCATTTCCACCATTTCTGATGGCGATCGAGCCGAT
JMFF003C10+ ACGCTCCATCAGAGCCAGGAGATGGCCATTTCCACCATTTCTGATGGCGATCGAGCCGAT
JMSF035M16+ ACGCTCCATCAGAGCCAGGAGATGGCCATTTCCACCATTTCTGATGGCGATCGAGCCGAT
____________________________________________________________
consensus ACGCTCCATCAGAGCCAGGAGATGGCCATTTCCACCATTTCTGATGGCGATCGAGCCGAT
. : . : . : . : . : . :
JMFF043E19+ CAGGCGACCCGGCAGCCAAACAAACAGCGGCGACCATAAAGATCGCCGCCGCCACGATTA
JMFF003C10+ CAGGCGACCCGGCAGCCAAACAAACAGCGGCGACCATAAAGATCGCCGCCGCCACGATTA
JMSF035M16+ CAGGCGACCCGGCAGCCAAACAAACAGCGGCGACCATAAAGATCGCCGCCGCCACGATTA
____________________________________________________________
consensus CAGGCGACCCGGCAGCCAAACAAACAGCGGCGACCATAAAGATCGCCGCCGCCACGATTA
. : . : . : . : . : . :
JMFF043E19+ ATCTCCCCTCCATCTCTCTCTATCTCTCCCACACAAGCTCAGGTCAAGCCGTCAGACAAG
JMFF003C10+ ATCTCCCCTCCATCTCTCTCTATCTCTCCCACACAAGCTCAGGTCAAGCCGTCAGACAAG
JMSF035M16+ ATCTCCCCTCCATCTCTCTCTATCTCTCCCACACAAGCTCAGGTCAAGCCGTCAGACAAG
____________________________________________________________
consensus ATCTCCCCTCCATCTCTCTCTATCTCTCCCACACAAGCTCAGGTCAAGCCGTCAGACAAG
. : . : . : . : . : . :
JMFF043E19+ GAGACAAAGAAGCAGACAACTAACAGAAGAAAATTTTTTTGTTTCAAGATGGGGCC
JMFF003C10+ GAGACAAAGAAGCAGACAACTAACAGAAGAAAATTTTTTTGTTTCAAGATGGGGCC
JMSF035M16+ GAGACAAAGAAGCAGACAACTAACAGAAGAAAATTTTTTTGTTTCAAGATGGGGCCAATC
____________________________________________________________
consensus GAGACAAAGAAGCAGACAACTAACAGAAGAAAATTTTTTTGTTTCAAGATGGGGCCAATC