Contig 005199:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021E08Sequence315005199 (2)ref|XP_004134868.1|89.0PREDICTED: uncharacterized protein LOC101203537 [Cucumis sativus] ref|XP_0041699756009692 (3)emb|CDP01911.1|9e-39unnamed protein product [Coffea canephora]
JMSF035G01Sequence645005199 (2)ref|XP_004134868.1|105PREDICTED: uncharacterized protein LOC101203537 [Cucumis sativus] ref|XP_0041699729001747 (31)ref|XP_009760710.1|5e-68PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF035G01+                          TGGCATTGNTGNTACCTCNTTNGGTTGTNCACATTTNTTGCANTT
                      ____________________________________________________________
consensus                            TGGCATTGNTGNTACCTCNTTNGGTTGTNCACATTTNTTGCANTT
 
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JMSF035G01+           TTNTCTTGATGCATAGTTGTTGTTAGTGCAACNTATTGGATCATTTNNCCACACACACCA
                      ____________________________________________________________
consensus             TTNTCTTGATGCATAGTTGTTGTTAGTGCAACNTATTGGATCATTTNNCCACACACACCA
 
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JMSF035G01+           TGCACAACCCAGCCAGAAGAGCAAACAATCCAAGAATACGCACGCCAACCNGCATCCAAT
                      ____________________________________________________________
consensus             TGCACAACCCAGCCAGAAGAGCAAACAATCCAAGAATACGCACGCCAACCNGCATCCAAT
 
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JMSF035G01+           ATGACAATACACAGAAAAAAGTGAAAAACCTCAACNTACAGAAATCAAGTTTNTAATGAC
                      ____________________________________________________________
consensus             ATGACAATACACAGAAAAAAGTGAAAAACCTCAACNTACAGAAATCAAGTTTNTAATGAC
 
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JMSF035G01+           ATTTGCATTTTAAAAAAAGTNTCAAACACGGGGGCTTAAAATGAAGAAATTAATTCCCGC
                      ____________________________________________________________
consensus             ATTTGCATTTTAAAAAAAGTNTCAAACACGGGGGCTTAAAATGAAGAAATTAATTCCCGC
 
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JMFF021E08+                                     AACAAGTTTAGCTATATTCNNAAAACAGGATATG
JMSF035G01+           TTCAGAGTTTAGTTCACTACACATTAAACAAGTTTAGCTATATTCCCAAAACAGGATATG
                      ____________________________________________________________
consensus             TTCAGAGTTTAGTTCACTACACATTAAACAAGTTTAGCTATATTCCCAAAACAGGATATG
 
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JMFF021E08+           AGAACATTTTCAATATNGCCAATCAAGAATGGTTCATCTNTTGGACTGTCATATATNTGC
JMSF035G01+           AGAACATTTTCAATATCGCCAATCAAGAATGGTTCATCTCTTGGACTCTCATATATNTGC
                      ____________________________________________________________
consensus             AGAACATTTTCAATATCGCCAATCAAGAATGGTTCATCTCTTGGACTGTCATATATNTGC
 
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JMFF021E08+           TATCGGTACAGATNCAATNGNCAATTGGAGGGAGCCACTTGGAATCGGGAGGAGTTTTGT
JMSF035G01+           TATCGGTACAGATCCAATCGCCAATTCGAGGGAGCCACTTGGAATCGGGAGGAGTTTTGT
                      ____________________________________________________________
consensus             TATCGGTACAGATCCAATCGCCAATTGGAGGGAGCCACTTGGAATCGGGAGGAGTTTTGT
 
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JMFF021E08+           TGTNTACCAGGAGGCGAGGCTGCTNACATCGGTTGCAGAAGNTTNTGAAGGCGTAGTTTC
JMSF035G01+           TGTCTACCAGGAGGCGAGGCTGCTTACATCGGTTGCAGAAGCTTCTGAAGGCGTAGTTTC
                      ____________________________________________________________
consensus             TGTCTACCAGGAGGCGAGGCTGCTTACATCGGTTGCAGAAGCTTCTGAAGGCGTAGTTTC
 
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JMFF021E08+           TGTTCCCGCATCCGCTACACTCCCAATCTCCTTCTGTACCTCCTCCTCCTCCTCCTCCTC
JMSF035G01+           TGTTCCCGCATCCGCTACACTCCCAATCTCCTTCTNTACCTCCTCCTCCTCCTCCTCCTC
                      ____________________________________________________________
consensus             TGTTCCCGCATCCGCTACACTCCCAATCTCCTTCTGTACCTCCTCCTCCTCCTCCTCCTC
 
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JMFF021E08+           CCCCACTACCACCTCCACCGCCGCCGCCTCCCATCAACCGT                   
JMSF035G01+           CCCCACTACCACCTCCACCGCCGCCGCCTCCCATCAACCGTATTCTATCGCTATCTCACC
                      ____________________________________________________________
consensus             CCCCACTACCACCTCCACCGCCGCCGCCTCCCATCAACCGTATTCTATCGCTATCTCACC