Contig 005197:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035B05Sequence678005197 (3)ref|XP_011073993.1|2e-30PREDICTED: UDP-glycosyltransferase 74E2-like [Sesamum indicum]699004315 (2)emb|CAN67246.1|1e-54hypothetical protein VITISV_008681 [Vitis vinifera]
JMSF050P18Sequence670005197 (3)ref|XP_011073993.1|2e-30PREDICTED: UDP-glycosyltransferase 74E2-like [Sesamum indicum]
JMSF053I15Sequence694005197 (3)ref|XP_011073993.1|1e-33PREDICTED: UDP-glycosyltransferase 74E2-like [Sesamum indicum]857004315 (2)emb|CAN67246.1|1e-70hypothetical protein VITISV_008681 [Vitis vinifera]

Alignment

This contig is upended


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JMSF050P18+                                                       GTCAAATGTGTTGAAC
JMSF053I15+                               CTTCACTACCTGNTCTTCTAGGGAGTCAAATGTGTTGAAC
JMSF035B05+                                                       GTCAAATGTGTTGAAC
                      ____________________________________________________________
consensus                                 CTTCACTACCTGNTCTTCTAGGGAGTCAAATGTGTTGAAC
 
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JMSF050P18+           AGAAAGCAGTCGGCTTTGGGCATGTTGATGGCCCGATTGATAGTAAACTCTTTAACTTCT
JMSF053I15+           AGAAAGCAGTCGGCTTTGGGCATGTTGATGGCCCGATTGATAGTAAACTCTTTAACTTCT
JMSF035B05+           AGAAAGCAGTCGGCTTTGGGCATGTTGATGGCCCGATTGATAGTAAACTCTTTAACTTCT
                      ____________________________________________________________
consensus             AGAAAGCAGTCGGCTTTGGGCATGTTGATGGCCCGATTGATAGTAAACTCTTTAACTTCT
 
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JMSF050P18+           TCAGCAATATCTCCGAAGTATGAAAAGGAAGGCAGATCGGCGAAGTCCATTATCGCCGGA
JMSF053I15+           TCAGCAATATCTCCGAAGTATGAAAAGGAAGGCAGATCGGCGAAGTCCATTATCGCCGGA
JMSF035B05+           TCAGCAATATCTCCGAAGTATGAAAAGGAAGGCAGATCGGCGAAGTCCATTATCGCCGGA
                      ____________________________________________________________
consensus             TCAGCAATATCTCCGAAGTATGAAAAGGAAGGCAGATCGGCGAAGTCCATTATCGCCGGA
 
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JMSF050P18+           AACGAAGGCAAACGCACCGTAGAATCAGAAGCAGTGTGTTGTTTGAGGGTGCCACAGAGC
JMSF053I15+           AACGAAGGCAAACGCACCGTAGAATCAGAAGCAGTGTGTTGTTTGAGGGTGCCACAGAGC
JMSF035B05+           AACGAAGGCAAACGCACCGTAGAATCAGAAGCAGTGTGTTGTTTGAGGGTGCCACAGAGC
                      ____________________________________________________________
consensus             AACGAAGGCAAACGCACCGTAGAATCAGAAGCAGTGTGTTGTTTGAGGGTGCCACAGAGC
 
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JMSF050P18+           ATATGGTAATAGATGCCACAAACCGCAGCTGGTTCTGTAAAGAAAGAAGCGACTCGCAAC
JMSF053I15+           ATATGGTAATAGATGCCACAAACCGCAGCGGGTTCTGTAAAGAAAGAAGCGACTCGCAAC
JMSF035B05+           ATATGGTAATAGATGCCACAAACCGCAGCGGGTTCTGTAAAGAAAGAAGCGACTCGCAAC
                      ____________________________________________________________
consensus             ATATGGTAATAGATGCCACAAACCGCAGCGGGTTCTGTAAAGAAAGAAGCGACTCGCAAC
 
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JMSF050P18+           CCACCCGTTCTTCCCACCTCTAAAAGCCAAGGCATGATTGAATCATGAACCAGAACTTTA
JMSF053I15+           CCACCCGTTCTTCCCACCTCTAAAAGCCAAGGCATGATTGAATCATGAACCAGAACTTTA
JMSF035B05+           CCACCCGTTCTTCCCACCTCTAAAAGCCAAGGCATGATTGAATCATGAACCAGAACTTTA
                      ____________________________________________________________
consensus             CCACCCGTTCTTCCCACCTCTAAAAGCCAAGGCATGATTGAATCATGAACCAGAACTTTA
 
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JMSF050P18+           GCCTTCTGCTTCTGCTTCTGAATAACGGCGGCGACTCCCTCGGAAACCGCGGCTTGCAGA
JMSF053I15+           GCCTTCTGCTTCTGCTTCTGAATAACGGCGGCGACTCCCTCGGAAACCGCGGCTTGCAGA
JMSF035B05+           GCCTTCTGCTTCTGCTTCTGAATAACGGCGGCGACTCCCTCGGAAACCGCGGCTTGCAGA
                      ____________________________________________________________
consensus             GCCTTCTGCTTCTGCTTCTGAATAACGGCGGCGACTCCCTCGGAAACCGCGGCTTGCAGA
 
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JMSF050P18+           CGAGTGCGGTATTCTTGGTGGGTGCGCGGCGGGTCGCCCACGTCGGTGCCATCGGAAATT
JMSF053I15+           CGAGTGCGGTATTCTTGGTGGGTGCGCGGCGGGTCGCCCACGTCGGTGCCATCGGAAATT
JMSF035B05+           CGAGTGCGGTATTCTTGGTGGGTGCGCGGCGGGTCGCCCACGTCGGTGCCATCGGAAATT
                      ____________________________________________________________
consensus             CGAGTGCGGTATTCTTGGTGGGTGCGCGGCGGGTCGCCCACGTCGGTGCCATCGGAAATT
 
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JMSF050P18+           AACTCGACCCTGTGGGAAAGGGGGAATTGCATGGACTTTGCTACTCCATGTGTGAGGAGC
JMSF053I15+           AACTCGACCCTGTGGGAAAGGGGGAATTGCATGGACTTTGCTACTCCATGTGTGAGGAGC
JMSF035B05+           AACTCGACCCTGTGGGAAAGGGGGAATTGCATGGACTTTGCTACTCCATGTGTGAGGAGC
                      ____________________________________________________________
consensus             AACTCGACCCTGTGGGAAAGGGGGAATTGCATGGACTTTGCTACTCCATGTGTGAGGAGC
 
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JMSF050P18+           AAGGTGACTTTAAGGCCTCTAGCGGATAAACAAGAACAGAAGTGAAGCATAGGGTTTAAG
JMSF053I15+           AAGGTGACTTTAAGGCCTCTAGCGGATAAACAAGAACAGAAGTGAAGCATAGGGTTTAAG
JMSF035B05+           AAGGTGACTTTAAGGCCTCTAGCGGATAAACAAGAACAGAAGTGAAGCATAGGGTTTAAG
                      ____________________________________________________________
consensus             AAGGTGACTTTAAGGCCTCTAGCGGATAAACAAGAACAGAAGTGAAGCATAGGGTTTAAG
 
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JMSF050P18+           TGACCTTGAAATGGAAATGGAACCGCTATAACATCTGCGCCCGTCTCCATATCCATATTC
JMSF053I15+           TGACCTTGAAATGGAAATGGAACCGCTATAACATCTGCGCCCGTCTCCATATCCATATTC
JMSF035B05+           TGACCTTGAAATGGAAATGGAACCGCTATAACATCTGCGCCCGTCTCCATATCCATATTC
                      ____________________________________________________________
consensus             TGACCTTGAAATGGAAATGGAACCGCTATAACATCTGCGCCCGTCTCCATATCCATATTC
 
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JMSF050P18+           GATCATATGTTTTCTTAATTTCTTTTCGCTAGCTGCAAATCCACCCACTAGCC       
JMSF053I15+           GATCATATGTTTTCTTAATTTCTTTTCGCTAGCTGCAAATCCACCCACTAGCC       
JMSF035B05+           GATCATATGTTTTCTTAATTTCTTTTCGCTAGCTGCAAATCCACCCACTAGCCACCTCTC
                      ____________________________________________________________
consensus             GATCATATGTTTTCTTAATTTCTTTTCGCTAGCTGCAAATCCACCCACTAGCCACCTCTC